Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 824-1080 |
| Cow position: | chr27:18589082-18589341 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 837-1080 |
| Cow position: | chr27:9261167-9261422 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 843-1058 |
| Cow position: | chr27:18546284-18546495 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 144 |
| Conread position: | 845-1062 |
| Cow position: | chr27:18573253-18573478 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 845-1067 |
| Cow position: | chr27:4922097-4921868 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 845-1076 |
| Cow position: | chr27:7860406-7860166 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 845-1076 |
| Cow position: | chr27:11021127-11021357 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 845-1076 |
| Cow position: | chr27:12548002-12547769 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 845-1076 |
| Cow position: | chr27:18179317-18179078 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 846-1054 |
| Cow position: | chr27:31523898-31524111 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 846-1080 |
| Cow position: | chr27:18056862-18057103 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 847-992 |
| Cow position: | chr27:1540894-1540748 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 848-1022 |
| Cow position: | chr27:12000307-12000125 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 853-1064 |
| Cow position: | chr27:31375971-31376184 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 880-1076 |
| Cow position: | chr27:2246406-2246586 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 880-1080 |
| Cow position: | chr27:15211158-15211363 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 39 |
| Conread position: | 885-1076 |
| Cow position: | chr27:3935297-3935104 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 886-1080 |
| Cow position: | chr27:17564443-17564635 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 896-1058 |
| Cow position: | chr27:11935110-11935283 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 931-1080 |
| Cow position: | chr27:6534604-6534459 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 18 |
Show alignments to all cow chromosomes.