Cow genome map

Conread name: Ss1.1-Spl1-SPL010005A09.5

Conread position: 816-1059
Cow position: chr4:58830264-58830498 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 26

Conread position: 819-1080
Cow position: chr4:53641925-53641662 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 124

Conread position: 824-1080
Cow position: chr4:31585997-31586254 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 30, 9

Conread position: 826-1076
Cow position: chr4:5886927-5886688 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 198, 17

Conread position: 830-1068
Cow position: chr4:27444642-27444403 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 14

Conread position: 830-1076
Cow position: chr4:32140673-32140924 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 100

Conread position: 831-1080
Cow position: chr4:2443296-2443552 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 221

Conread position: 833-1080
Cow position: chr4:41975124-41975373 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 90

Conread position: 835-1076
Cow position: chr4:34043005-34043270 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 93

Conread position: 836-1063
Cow position: chr4:59809362-59809589 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 62

Conread position: 842-1080
Cow position: chr4:54347782-54347547 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 39

Conread position: 844-1071
Cow position: chr4:9822734-9822506 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 78

Conread position: 845-1072
Cow position: chr4:9089500-9089728 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 75

Conread position: 845-1076
Cow position: chr4:6629744-6629974 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 121

Conread position: 845-1076
Cow position: chr4:57565636-57565870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 845-1080
Cow position: chr4:21163220-21162992 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 28

Conread position: 845-1080
Cow position: chr4:31002769-31003012 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 83

Conread position: 845-1080
Cow position: chr4:36759872-36759623 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 82

Conread position: 846-992
Cow position: chr4:5784299-5784146 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 81

Conread position: 846-1071
Cow position: chr4:68106792-68107006 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 177, 31

Conread position: 846-1077
Cow position: chr4:57221631-57221874 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 79

Conread position: 846-1079
Cow position: chr4:5978254-5978487 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 75

Conread position: 847-1058
Cow position: chr4:49881409-49881625 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 75

Conread position: 848-1076
Cow position: chr4:58873825-58873601 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 77

Conread position: 853-1076
Cow position: chr4:49742137-49741910 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 854-1069
Cow position: chr4:15046460-15046234 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 112

Conread position: 854-1075
Cow position: chr4:52596971-52597202 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 77

Conread position: 856-1080
Cow position: chr4:58855942-58856164 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 64

Conread position: 857-1074
Cow position: chr4:27505688-27505474 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 10

Conread position: 862-1043
Cow position: chr4:32750018-32749853 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 19

Conread position: 867-1076
Cow position: chr4:58432410-58432620 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 53

Conread position: 872-1079
Cow position: chr4:25924414-25924613 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 878-1080
Cow position: chr4:20925466-20925668 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 73

Conread position: 879-1080
Cow position: chr4:4519691-4519497 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 880-1058
Cow position: chr4:4029372-4029194 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 38

Conread position: 880-1073
Cow position: chr4:52697411-52697228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 39

Conread position: 883-1076
Cow position: chr4:5188470-5188658 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 161
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 140, 35

Conread position: 885-1053
Cow position: chr4:7655310-7655143 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 105

Conread position: 885-1076
Cow position: chr4:57652747-57652559 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 33

Conread position: 885-1080
Cow position: chr4:4192733-4192545 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 22

Conread position: 885-1080
Cow position: chr4:22506848-22507035 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 138, 31

Conread position: 888-1076
Cow position: chr4:47511563-47511376 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 31

Conread position: 923-1080
Cow position: chr4:51905773-51905615 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 89

Conread position: 937-1080
Cow position: chr4:24713166-24713312 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.