Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 792-1055 |
| Cow position: | chr7:62049101-62048832 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 804-1080 |
| Cow position: | chr7:46216712-46216440 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 829-1060 |
| Cow position: | chr7:32589465-32589218 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 830-1076 |
| Cow position: | chr7:61426225-61425971 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 833-998 |
| Cow position: | chr7:48334856-48335023 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 834-992 |
| Cow position: | chr7:27765897-27765738 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 836-971 |
| Cow position: | chr7:31441479-31441617 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 838-1038 |
| Cow position: | chr7:43005028-43004819 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 840-1080 |
| Cow position: | chr7:40622817-40622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 53, 89 |
| Conread position: | 843-1010 |
| Cow position: | chr7:8893408-8893584 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 843-1058 |
| Cow position: | chr7:11592594-11592809 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 844-1035 |
| Cow position: | chr7:43257830-43257631 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 845-1054 |
| Cow position: | chr7:40616116-40615934 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 845-1076 |
| Cow position: | chr7:30027765-30027536 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 845-1076 |
| Cow position: | chr7:62516642-62516406 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 846-1076 |
| Cow position: | chr7:12920014-12920250 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 847-1080 |
| Cow position: | chr7:56664686-56664461 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 853-1069 |
| Cow position: | chr7:63547166-63547372 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 853-1074 |
| Cow position: | chr7:59204912-59204671 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 30, 75 |
| Conread position: | 853-1080 |
| Cow position: | chr7:20104379-20104618 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 877-1074 |
| Cow position: | chr7:40023279-40023109 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 880-1041 |
| Cow position: | chr7:64367288-64367124 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 880-1079 |
| Cow position: | chr7:45099823-45099627 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 106 |
| Conread position: | 885-1080 |
| Cow position: | chr7:42221836-42222026 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 886-1080 |
| Cow position: | chr7:5701510-5701315 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 898-1080 |
| Cow position: | chr7:13823360-13823187 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 900-1080 |
| Cow position: | chr7:63328664-63328494 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 164, 18 |
Show alignments to all cow chromosomes.