Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005A09.5 |
| Conread position: | 826-1079 |
| Cow position: | chr8:14617274-14617531 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 826-1080 |
| Cow position: | chr8:49406110-49406356 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 827-1073 |
| Cow position: | chr8:30021309-30021557 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 830-1044 |
| Cow position: | chr8:32959987-32960200 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 832-1080 |
| Cow position: | chr8:54159357-54159100 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 839-1076 |
| Cow position: | chr8:2975279-2975034 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 839-1076 |
| Cow position: | chr8:28387178-28387412 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 843-1058 |
| Cow position: | chr8:8480041-8480267 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 843-1075 |
| Cow position: | chr8:6507667-6507907 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 843-1079 |
| Cow position: | chr8:9672487-9672241 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 845-1040 |
| Cow position: | chr8:9986397-9986185 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 845-1050 |
| Cow position: | chr8:5803788-5803569 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 845-1052 |
| Cow position: | chr8:32720514-32720318 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 845-1067 |
| Cow position: | chr8:45685870-45686085 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 845-1070 |
| Cow position: | chr8:31185839-31185606 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 845-1073 |
| Cow position: | chr8:40273040-40273272 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 845-1075 |
| Cow position: | chr8:11794782-11794557 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 845-1078 |
| Cow position: | chr8:40432263-40432502 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 845-1080 |
| Cow position: | chr8:6763679-6763918 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 845-1080 |
| Cow position: | chr8:7103810-7104046 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 845-1080 |
| Cow position: | chr8:18801837-18801600 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 845-1080 |
| Cow position: | chr8:19773075-19772840 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 846-1058 |
| Cow position: | chr8:19305643-19305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 846-1080 |
| Cow position: | chr8:10167429-10167200 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 847-1037 |
| Cow position: | chr8:18725810-18725607 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 873-1079 |
| Cow position: | chr8:19368948-19369142 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 879-1080 |
| Cow position: | chr8:4336499-4336697 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 880-1037 |
| Cow position: | chr8:32327454-32327297 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 880-1080 |
| Cow position: | chr8:23440551-23440743 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 142, 39 |
| Conread position: | 885-1038 |
| Cow position: | chr8:7102640-7102487 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 885-1073 |
| Cow position: | chr8:33818684-33818863 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 885-1080 |
| Cow position: | chr8:53359401-53359597 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 886-1075 |
| Cow position: | chr8:53892085-53891899 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 886-1076 |
| Cow position: | chr8:18883381-18883191 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 118 |
| Conread position: | 886-1076 |
| Cow position: | chr8:33438350-33438153 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 886-1076 |
| Cow position: | chr8:48681936-48682129 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 886-1080 |
| Cow position: | chr8:22102635-22102830 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 893-1080 |
| Cow position: | chr8:5874691-5874510 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 27 |
Show alignments to all cow chromosomes.