Cow genome map

Conread name: Ss1.1-Spl1-SPL010005A09.5

Conread position: 789-1066
Cow position: chr9:1517911-1517634 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 16

Conread position: 821-1076
Cow position: chr9:39001188-39001432 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 202, 9

Conread position: 824-1076
Cow position: chr9:41318578-41318315 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 104

Conread position: 826-1076
Cow position: chr9:34188394-34188647 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 59, 102

Conread position: 830-1080
Cow position: chr9:25503075-25502837 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 51

Conread position: 833-1005
Cow position: chr9:5622625-5622444 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 96

Conread position: 834-1022
Cow position: chr9:56795299-56795112 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 92

Conread position: 835-1060
Cow position: chr9:62721418-62721187 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 17

Conread position: 836-1079
Cow position: chr9:23294066-23294305 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 18

Conread position: 836-1079
Cow position: chr9:56411697-56411456 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 93

Conread position: 839-996
Cow position: chr9:20394809-20394645 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 85

Conread position: 842-1080
Cow position: chr9:4834416-4834653 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 11

Conread position: 842-1080
Cow position: chr9:26585146-26585380 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 87

Conread position: 843-1057
Cow position: chr9:40923226-40923000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 86

Conread position: 843-1080
Cow position: chr9:1527372-1527127 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 85

Conread position: 843-1080
Cow position: chr9:13071791-13072035 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 85

Conread position: 843-1080
Cow position: chr9:34763429-34763181 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 84

Conread position: 845-992
Cow position: chr9:35794861-35795017 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 84

Conread position: 845-1047
Cow position: chr9:55203225-55203021 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 8

Conread position: 845-1055
Cow position: chr9:64606305-64606090 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 36, 161

Conread position: 845-1073
Cow position: chr9:2638887-2638655 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 80

Conread position: 845-1076
Cow position: chr9:7670065-7670283 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 845-1076
Cow position: chr9:15282606-15282842 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 18

Conread position: 846-1058
Cow position: chr9:39994331-39994111 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 84

Conread position: 846-1079
Cow position: chr9:6109341-6109572 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 64

Conread position: 847-1076
Cow position: chr9:18570943-18570719 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 177, 33

Conread position: 848-1076
Cow position: chr9:12183161-12183393 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 52

Conread position: 853-1073
Cow position: chr9:36587280-36587043 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 68

Conread position: 863-1025
Cow position: chr9:26033830-26033667 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 60

Conread position: 879-1035
Cow position: chr9:42366300-42366454 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 39

Conread position: 880-1044
Cow position: chr9:59113919-59114089 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 113, 39

Conread position: 880-1076
Cow position: chr9:4985892-4985698 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 131, 39

Conread position: 880-1080
Cow position: chr9:8234087-8234273 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 143, 38

Conread position: 880-1080
Cow position: chr9:15855561-15855368 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 114, 38

Conread position: 885-1062
Cow position: chr9:12199430-12199254 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 33

Conread position: 885-1075
Cow position: chr9:6557303-6557490 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 139, 33

Conread position: 885-1080
Cow position: chr9:22376741-22376935 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 138, 33

Conread position: 885-1080
Cow position: chr9:45140370-45140566 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 33

Conread position: 886-1058
Cow position: chr9:19082116-19081949 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 138, 9

Conread position: 886-1067
Cow position: chr9:12564874-12565046 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 19

Conread position: 886-1073
Cow position: chr9:38697971-38698153 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 33

Conread position: 887-1080
Cow position: chr9:58125661-58125853 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 120, 29

Conread position: 896-1039
Cow position: chr9:14373604-14373748 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 24

Conread position: 922-1080
Cow position: chr9:53597299-53597133 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.