Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010005H11.5 |
| Conread position: | 7-276 |
| Cow position: | chr11:40248033-40247750 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 321-411 |
| Cow position: | chr11:40244816-40244726 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-521 |
| Cow position: | chr11:40243803-40243693 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 516-665 |
| Cow position: | chr11:40243099-40242950 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 662-785 |
| Cow position: | chr11:40241830-40241707 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 122 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 781-932 |
| Cow position: | chr11:40241367-40241214 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 919-1058 |
| Cow position: | chr11:40240299-40240160 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1155 |
| Cow position: | chr11:40238708-40238604 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1154-1271 |
| Cow position: | chr11:40238523-40238406 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1261-1397 |
| Cow position: | chr11:40238324-40238188 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 129 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1387-1647 |
| Cow position: | chr11:40238047-40237788 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 1631-1753 |
| Cow position: | chr11:40235964-40235842 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 117 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1778-2082 |
| Cow position: | chr11:40235563-40235277 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 37 |
Show alignments to all cow chromosomes.