Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010013G11.5.5
        

               Conread position:
               130-403
               

               Cow position:
               chr2:49856247-49856537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 76
               

               Conread position:
               132-394
               

               Cow position:
               chr2:16817069-16817332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 223
               

               Conread position:
               132-403
               

               Cow position:
               chr2:13125485-13125776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               133-341
               

               Cow position:
               chr2:74251808-74252024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 118
               

               Conread position:
               146-325
               

               Cow position:
               chr2:70155881-70156056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               405-547
               

               Cow position:
               chr2:16820504-16820646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               125
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               546-658
               

               Cow position:
               chr2:16832380-16832492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               637-1035
               

               Cow position:
               chr2:16842837-16843237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 379
               
Show alignments to all cow chromosomes.