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Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL010021F06.5
        

               
Conread position:
               
303-670
               

               
Cow position:
               
chr23:11376526-11376144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
303-772
               

               
Cow position:
               
chr23:18797096-18796615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 265
               

               
Conread position:
               
306-753
               

               
Cow position:
               
chr23:40526361-40525916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
308-568
               

               
Cow position:
               
chr23:20586100-20585842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
310-662
               

               
Cow position:
               
chr23:39126256-39125912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
310-755
               

               
Cow position:
               
chr23:40825609-40826060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
314-643
               

               
Cow position:
               
chr23:6683337-6683679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
315-491
               

               
Cow position:
               
chr23:9231918-9231737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr23:7374499-7374698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
315-703
               

               
Cow position:
               
chr23:18491788-18492184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
315-755
               

               
Cow position:
               
chr23:1959956-1960404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
315-755
               

               
Cow position:
               
chr23:29447425-29446977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 209
               

               
Conread position:
               
315-771
               

               
Cow position:
               
chr23:35941844-35942298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
315-866
               

               
Cow position:
               
chr23:7835876-7835307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
315-896
               

               
Cow position:
               
chr23:8698068-8698631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
317-568
               

               
Cow position:
               
chr23:25883306-25883553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
317-753
               

               
Cow position:
               
chr23:10415401-10414957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
319-900
               

               
Cow position:
               
chr23:4579412-4578821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
321-480
               

               
Cow position:
               
chr23:34264886-34264725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
322-549
               

               
Cow position:
               
chr23:12003904-12004134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
322-613
               

               
Cow position:
               
chr23:28118474-28118170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
322-678
               

               
Cow position:
               
chr23:1240692-1241036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
248, 18
               

               
Conread position:
               
322-880
               

               
Cow position:
               
chr23:22804354-22804913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 105
               

               
Conread position:
               
324-465
               

               
Cow position:
               
chr23:14969956-14969813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
324-541
               

               
Cow position:
               
chr23:666477-666260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
324-565
               

               
Cow position:
               
chr23:11010039-11009805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
324-615
               

               
Cow position:
               
chr23:24562254-24561958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
324-662
               

               
Cow position:
               
chr23:16610180-16609828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 216
               

               
Conread position:
               
324-665
               

               
Cow position:
               
chr23:30889277-30889617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
324-688
               

               
Cow position:
               
chr23:18367327-18367702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
324-753
               

               
Cow position:
               
chr23:29441370-29440936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 314
               

               
Conread position:
               
324-774
               

               
Cow position:
               
chr23:26798057-26797587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
324-817
               

               
Cow position:
               
chr23:6995331-6994854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 30
               

               
Conread position:
               
324-900
               

               
Cow position:
               
chr23:25676039-25675485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
326-544
               

               
Cow position:
               
chr23:14566091-14565861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
326-565
               

               
Cow position:
               
chr23:9222991-9223214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
327-548
               

               
Cow position:
               
chr23:27529655-27529435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
327-752
               

               
Cow position:
               
chr23:14245144-14245570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 202
               

               
Conread position:
               
331-568
               

               
Cow position:
               
chr23:31395290-31395057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
331-824
               

               
Cow position:
               
chr23:1924196-1923702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 133
               

               
Conread position:
               
332-551
               

               
Cow position:
               
chr23:3549343-3549123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
332-568
               

               
Cow position:
               
chr23:3208571-3208334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
332-662
               

               
Cow position:
               
chr23:10518092-10517764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 220
               

               
Conread position:
               
332-728
               

               
Cow position:
               
chr23:2369633-2370026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
334-465
               

               
Cow position:
               
chr23:11163336-11163205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 121
               

               
Conread position:
               
334-516
               

               
Cow position:
               
chr23:26230968-26231147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
334-531
               

               
Cow position:
               
chr23:20001718-20001915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
334-545
               

               
Cow position:
               
chr23:35937666-35937872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
334-550
               

               
Cow position:
               
chr23:29811291-29811508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
334-565
               

               
Cow position:
               
chr23:23849397-23849633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
334-568
               

               
Cow position:
               
chr23:14896153-14895927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
334-568
               

               
Cow position:
               
chr23:30912660-30912422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 204
               

               
Conread position:
               
334-579
               

               
Cow position:
               
chr23:35374978-35374744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
334-605
               

               
Cow position:
               
chr23:35926241-35926514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
334-648
               

               
Cow position:
               
chr23:2371022-2371338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
334-675
               

               
Cow position:
               
chr23:36688182-36687854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
334-762
               

               
Cow position:
               
chr23:2531691-2531273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
334-769
               

               
Cow position:
               
chr23:15710435-15709989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
334-828
               

               
Cow position:
               
chr23:9268231-9268719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
334-882
               

               
Cow position:
               
chr23:344533-343985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
334-882
               

               
Cow position:
               
chr23:9734062-9734613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 124
               

               
Conread position:
               
334-897
               

               
Cow position:
               
chr23:4996442-4995889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr23:9133023-9132804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
335-650
               

               
Cow position:
               
chr23:8930467-8930158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr23:16383828-16383485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
213, 189
               

               
Conread position:
               
339-537
               

               
Cow position:
               
chr23:19910303-19910105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-550
               

               
Cow position:
               
chr23:2520409-2520197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 175
               

               
Conread position:
               
339-568
               

               
Cow position:
               
chr23:15020774-15021003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-655
               

               
Cow position:
               
chr23:26932798-26933126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
339-716
               

               
Cow position:
               
chr23:28358997-28358617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
339-768
               

               
Cow position:
               
chr23:35284659-35284221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 81
               

               
Conread position:
               
339-771
               

               
Cow position:
               
chr23:7791265-7790835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
200, 119
               

               
Conread position:
               
339-894
               

               
Cow position:
               
chr23:11128881-11129441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
339-900
               

               
Cow position:
               
chr23:1883041-1883604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 287
               

               
Conread position:
               
340-444
               

               
Cow position:
               
chr23:31609813-31609709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-451
               

               
Cow position:
               
chr23:19266130-19266016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
340-454
               

               
Cow position:
               
chr23:22031587-22031474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
340-462
               

               
Cow position:
               
chr23:7324403-7324524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
340-466
               

               
Cow position:
               
chr23:953940-953814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-466
               

               
Cow position:
               
chr23:20977592-20977718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-466
               

               
Cow position:
               
chr23:30588870-30588996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-468
               

               
Cow position:
               
chr23:13408949-13409078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
340-505
               

               
Cow position:
               
chr23:922066-922231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr23:496950-496783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
340-517
               

               
Cow position:
               
chr23:39762017-39762192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
340-520
               

               
Cow position:
               
chr23:26824641-26824819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
340-526
               

               
Cow position:
               
chr23:17796668-17796484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
340-531
               

               
Cow position:
               
chr23:18204134-18204321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
340-539
               

               
Cow position:
               
chr23:40370948-40370751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
340-548
               

               
Cow position:
               
chr23:3328261-3328057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:772300-772507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
186, 118
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:2320087-2319878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:15214993-15214788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:22143165-22142956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
129, 152
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:22170767-22170976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:31606289-31606498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:34855013-34854806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:37198466-37198260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:38708858-38709067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr23:40553280-40553071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
149, 143
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr23:18655535-18655745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr23:19967281-19967487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr23:20734156-20734366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr23:24120416-24120626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr23:25565851-25566062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:672031-672242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:977189-976978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:1113813-1114024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:2311897-2311686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:3734587-3734376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:15764188-15764399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:18487399-18487610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:31126955-31126744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:39110743-39110954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr23:39745721-39745932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-553
               

               
Cow position:
               
chr23:29699445-29699226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
340-555
               

               
Cow position:
               
chr23:5441778-5441997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
340-555
               

               
Cow position:
               
chr23:16072879-16073095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
340-556
               

               
Cow position:
               
chr23:12570791-12570575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
340-556
               

               
Cow position:
               
chr23:14910576-14910361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr23:7294052-7294269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr23:28076514-28076295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr23:28183433-28183652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
340-563
               

               
Cow position:
               
chr23:10936435-10936212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-563
               

               
Cow position:
               
chr23:25336644-25336421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-564
               

               
Cow position:
               
chr23:9641767-9641547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
135, 78
               

               
Conread position:
               
340-564
               

               
Cow position:
               
chr23:11209645-11209882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr23:26003713-26003934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr23:40081114-40081340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
340-566
               

               
Cow position:
               
chr23:14576073-14576299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:292691-292919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:1582028-1582256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:2470246-2470461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:2723607-2723835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:3485302-3485530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:3873424-3873196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:4079990-4079762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:4636490-4636259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:9712762-9712988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:10840731-10840959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:11070925-11071153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:11409610-11409382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:11711852-11711624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:14385847-14385619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:15569423-15569651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:15702856-15702630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:17848258-17848486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:20545726-20545498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:24504898-24505122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
166, 118
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:25352222-25352450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:25362992-25363221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:25562477-25562250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:26373814-26374042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:26932441-26932213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:27423726-27423954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:28085015-28085243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
128, 151
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:28622037-28621809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 128
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:31585163-31585391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:31827364-31827592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:36027392-36027167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:39784618-39784846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr23:40774189-40774417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-569
               

               
Cow position:
               
chr23:28026499-28026722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
340-569
               

               
Cow position:
               
chr23:28079482-28079710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
340-569
               

               
Cow position:
               
chr23:39207258-39207030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 84
               

               
Conread position:
               
340-570
               

               
Cow position:
               
chr23:28366678-28366449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
340-576
               

               
Cow position:
               
chr23:28987892-28988129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 0
               

               
Conread position:
               
340-598
               

               
Cow position:
               
chr23:9235416-9235156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
340-604
               

               
Cow position:
               
chr23:1719164-1719440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 196
               

               
Conread position:
               
340-605
               

               
Cow position:
               
chr23:30752192-30751927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-619
               

               
Cow position:
               
chr23:5151630-5151916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
340-622
               

               
Cow position:
               
chr23:26741801-26741518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
340-633
               

               
Cow position:
               
chr23:7596679-7596382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
340-637
               

               
Cow position:
               
chr23:221719-222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 173
               

               
Conread position:
               
340-637
               

               
Cow position:
               
chr23:29467080-29466800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
166, 80
               

               
Conread position:
               
340-647
               

               
Cow position:
               
chr23:361262-360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
340-650
               

               
Cow position:
               
chr23:20980494-20980800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
340-651
               

               
Cow position:
               
chr23:30656508-30656207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
340-652
               

               
Cow position:
               
chr23:39793099-39793419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
340-653
               

               
Cow position:
               
chr23:9711954-9711610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 158
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr23:7494475-7494802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr23:15271588-15271261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
213, 257
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr23:32650425-32650099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
212, 312
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr23:40710782-40711104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
340-656
               

               
Cow position:
               
chr23:9725593-9725275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
340-657
               

               
Cow position:
               
chr23:10843975-10844272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
205, 80
               

               
Conread position:
               
340-660
               

               
Cow position:
               
chr23:11344353-11344682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
211, 194
               

               
Conread position:
               
340-661
               

               
Cow position:
               
chr23:9267002-9266669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-661
               

               
Cow position:
               
chr23:16058248-16058570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 194
               

               
Conread position:
               
340-661
               

               
Cow position:
               
chr23:39389913-39390246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:805973-806306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:1640460-1640789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 275
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:4267297-4267631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:9595180-9594851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 150
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:11080246-11080582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:22011132-22011468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr23:37992645-37992963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
200, 109
               

               
Conread position:
               
340-666
               

               
Cow position:
               
chr23:31607523-31607168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 198
               

               
Conread position:
               
340-667
               

               
Cow position:
               
chr23:5623719-5623383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
340-668
               

               
Cow position:
               
chr23:4273830-4274168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
211, 311
               

               
Conread position:
               
340-669
               

               
Cow position:
               
chr23:22530757-22530430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 78
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr23:5458600-5458939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
217, 324
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr23:31353996-31354340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
340-671
               

               
Cow position:
               
chr23:778309-777984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 73
               

               
Conread position:
               
340-671
               

               
Cow position:
               
chr23:35070133-35070464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 118
               

               
Conread position:
               
340-673
               

               
Cow position:
               
chr23:1430151-1429807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 270
               

               
Conread position:
               
340-676
               

               
Cow position:
               
chr23:39741086-39740746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
190, 97
               

               
Conread position:
               
340-677
               

               
Cow position:
               
chr23:28916189-28916538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
208, 179
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr23:573406-573054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 317
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr23:1131754-1132106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr23:14215375-14215029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
213, 310
               

               
Conread position:
               
340-685
               

               
Cow position:
               
chr23:3208967-3208620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr23:3825175-3824818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
223, 311
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr23:3827229-3826872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
223, 311
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr23:20455972-20455615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
230, 311
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr23:25380943-25381300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 328
               

               
Conread position:
               
340-700
               

               
Cow position:
               
chr23:32961727-32961349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 132
               

               
Conread position:
               
340-703
               

               
Cow position:
               
chr23:10873800-10873429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-712
               

               
Cow position:
               
chr23:11459373-11458993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
340-718
               

               
Cow position:
               
chr23:19202980-19202594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 197
               

               
Conread position:
               
340-720
               

               
Cow position:
               
chr23:479177-479564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 24
               

               
Conread position:
               
340-720
               

               
Cow position:
               
chr23:1670570-1670936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
340-720
               

               
Cow position:
               
chr23:7852304-7851916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
213, 310
               

               
Conread position:
               
340-721
               

               
Cow position:
               
chr23:4855987-4855597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 312
               

               
Conread position:
               
340-722
               

               
Cow position:
               
chr23:12864549-12864938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
212, 179
               

               
Conread position:
               
340-723
               

               
Cow position:
               
chr23:5738079-5737684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr23:6720628-6720242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr23:21351094-21350702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
207, 143
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr23:31638469-31638860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 143
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr23:32052241-32052636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
213, 118
               

               
Conread position:
               
340-728
               

               
Cow position:
               
chr23:9517813-9517422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
212, 307
               

               
Conread position:
               
340-731
               

               
Cow position:
               
chr23:19493714-19494112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
209, 311
               

               
Conread position:
               
340-740
               

               
Cow position:
               
chr23:8959248-8959649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 130
               

               
Conread position:
               
340-743
               

               
Cow position:
               
chr23:4608737-4608324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr23:19056504-19056087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr23:27314604-27315023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr23:29043645-29044064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr23:39747897-39748316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 313
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:1047226-1046809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
230, 118
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:3727750-3727316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 97
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:3877318-3876899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
211, 307
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:4892558-4892974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
186, 164
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:7402355-7402769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 190
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:7429099-7429522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:8708253-8708675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
213, 280
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:11782647-11783070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
211, 311
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:16172308-16172731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
133, 127
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:17846965-17847377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:21772047-21771624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
225, 311
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:24098987-24099409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
211, 94
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:26829104-26829518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 129
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:27402995-27403412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
211, 128
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:30622545-30622119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 136
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr23:40734678-40734264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
211, 298
               

               
Conread position:
               
340-757
               

               
Cow position:
               
chr23:416819-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
340-758
               

               
Cow position:
               
chr23:1647268-1647688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 206
               

               
Conread position:
               
340-764
               

               
Cow position:
               
chr23:4293297-4293725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
340-764
               

               
Cow position:
               
chr23:17678242-17677815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
129, 139
               

               
Conread position:
               
340-764
               

               
Cow position:
               
chr23:33658190-33657757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
225, 311
               

               
Conread position:
               
340-764
               

               
Cow position:
               
chr23:36129250-36128836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
340-767
               

               
Cow position:
               
chr23:8911128-8911544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 40
               

               
Conread position:
               
340-768
               

               
Cow position:
               
chr23:14266180-14266611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
213, 304
               

               
Conread position:
               
340-768
               

               
Cow position:
               
chr23:27996787-27997211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 86
               

               
Conread position:
               
340-768
               

               
Cow position:
               
chr23:28052926-28053354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 265
               

               
Conread position:
               
340-771
               

               
Cow position:
               
chr23:40633529-40633085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
211, 358
               

               
Conread position:
               
340-772
               

               
Cow position:
               
chr23:3321829-3322269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
230, 313
               

               
Conread position:
               
340-775
               

               
Cow position:
               
chr23:18322768-18322338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 61
               

               
Conread position:
               
340-776
               

               
Cow position:
               
chr23:16495420-16494979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
209, 54
               

               
Conread position:
               
340-782
               

               
Cow position:
               
chr23:39806512-39806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
340-790
               

               
Cow position:
               
chr23:34347985-34348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
340-793
               

               
Cow position:
               
chr23:11434618-11434154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 201
               

               
Conread position:
               
340-793
               

               
Cow position:
               
chr23:11844940-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 34
               

               
Conread position:
               
340-794
               

               
Cow position:
               
chr23:353929-353498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 96
               

               
Conread position:
               
340-795
               

               
Cow position:
               
chr23:14839083-14838636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 80
               

               
Conread position:
               
340-801
               

               
Cow position:
               
chr23:40780977-40781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
340-802
               

               
Cow position:
               
chr23:27564045-27563590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
230, 35
               

               
Conread position:
               
340-803
               

               
Cow position:
               
chr23:11473857-11473388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
340-803
               

               
Cow position:
               
chr23:24866955-24867426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 69
               

               
Conread position:
               
340-804
               

               
Cow position:
               
chr23:1721353-1720865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 201
               

               
Conread position:
               
340-807
               

               
Cow position:
               
chr23:6593061-6592588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
340-810
               

               
Cow position:
               
chr23:25669417-25668968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 45
               

               
Conread position:
               
340-812
               

               
Cow position:
               
chr23:19002419-19001945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 118
               

               
Conread position:
               
340-817
               

               
Cow position:
               
chr23:10554362-10553880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 131
               

               
Conread position:
               
340-819
               

               
Cow position:
               
chr23:1254320-1254820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
340-819
               

               
Cow position:
               
chr23:6158557-6158067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
225, 127
               

               
Conread position:
               
340-824
               

               
Cow position:
               
chr23:13511385-13511861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 80
               

               
Conread position:
               
340-824
               

               
Cow position:
               
chr23:20435403-20434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
340-824
               

               
Cow position:
               
chr23:21336840-21336346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 193
               

               
Conread position:
               
340-824
               

               
Cow position:
               
chr23:30662975-30662500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 109
               

               
Conread position:
               
340-825
               

               
Cow position:
               
chr23:18698378-18697889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 245
               

               
Conread position:
               
340-826
               

               
Cow position:
               
chr23:39775361-39775866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
340-832
               

               
Cow position:
               
chr23:1398385-1397891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 105
               

               
Conread position:
               
340-843
               

               
Cow position:
               
chr23:29271753-29272267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 343
               

               
Conread position:
               
340-876
               

               
Cow position:
               
chr23:14164754-14164207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
340-880
               

               
Cow position:
               
chr23:31493533-31494058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 62
               

               
Conread position:
               
340-881
               

               
Cow position:
               
chr23:7844938-7845480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 85
               

               
Conread position:
               
340-882
               

               
Cow position:
               
chr23:41472264-41472818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
340-886
               

               
Cow position:
               
chr23:1535971-1536517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
340-889
               

               
Cow position:
               
chr23:39049763-39049240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 95
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr23:533882-534433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 85
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr23:33601871-33601326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 109
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr23:40777912-40778470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 118
               

               
Conread position:
               
340-897
               

               
Cow position:
               
chr23:7392634-7392090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 169
               

               
Conread position:
               
340-897
               

               
Cow position:
               
chr23:10852704-10853255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 80
               

               
Conread position:
               
340-897
               

               
Cow position:
               
chr23:18802624-18802058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 329
               

               
Conread position:
               
340-897
               

               
Cow position:
               
chr23:26986631-26986064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
340-897
               

               
Cow position:
               
chr23:34416218-34416777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
340-898
               

               
Cow position:
               
chr23:15180802-15181359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 106
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:1289952-1290518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 80
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:3394857-3394287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:9874334-9874872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 54
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:13520107-13520655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 97
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:16246393-16246950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 147
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:20744940-20744371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 280
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:28206264-28206810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 58
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr23:40502853-40502301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 80
               

               
Conread position:
               
341-467
               

               
Cow position:
               
chr23:2721580-2721703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
341-502
               

               
Cow position:
               
chr23:35929651-35929816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
341-523
               

               
Cow position:
               
chr23:26322775-26322593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-531
               

               
Cow position:
               
chr23:7311522-7311712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr23:2790913-2790707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr23:15529436-15529640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
341-568
               

               
Cow position:
               
chr23:610563-610790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-568
               

               
Cow position:
               
chr23:2528536-2528309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
341-568
               

               
Cow position:
               
chr23:3167892-3168122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 195
               

               
Conread position:
               
341-568
               

               
Cow position:
               
chr23:11973511-11973736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
341-663
               

               
Cow position:
               
chr23:4437469-4437804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
211, 103
               

               
Conread position:
               
341-663
               

               
Cow position:
               
chr23:27735075-27735407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
229, 176
               

               
Conread position:
               
341-678
               

               
Cow position:
               
chr23:28306704-28307054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
133, 313
               

               
Conread position:
               
341-688
               

               
Cow position:
               
chr23:406507-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 27
               

               
Conread position:
               
341-703
               

               
Cow position:
               
chr23:1009749-1009385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 25
               

               
Conread position:
               
341-716
               

               
Cow position:
               
chr23:28032091-28032469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
148, 143
               

               
Conread position:
               
341-716
               

               
Cow position:
               
chr23:28120152-28120532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 143
               

               
Conread position:
               
341-728
               

               
Cow position:
               
chr23:3710563-3710954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
232, 305
               

               
Conread position:
               
341-755
               

               
Cow position:
               
chr23:2021804-2021393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
207, 96
               

               
Conread position:
               
341-755
               

               
Cow position:
               
chr23:30633730-30633312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 306
               

               
Conread position:
               
341-759
               

               
Cow position:
               
chr23:19636613-19636191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 117
               

               
Conread position:
               
341-812
               

               
Cow position:
               
chr23:5389358-5389823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
341-824
               

               
Cow position:
               
chr23:1700572-1701028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 75
               

               
Conread position:
               
341-824
               

               
Cow position:
               
chr23:14739103-14739586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
341-891
               

               
Cow position:
               
chr23:5870537-5869986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 307
               

               
Conread position:
               
341-897
               

               
Cow position:
               
chr23:7175273-7175826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 79
               

               
Conread position:
               
342-528
               

               
Cow position:
               
chr23:13945408-13945594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-546
               

               
Cow position:
               
chr23:19737473-19737269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-549
               

               
Cow position:
               
chr23:14958026-14957819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-551
               

               
Cow position:
               
chr23:33074879-33075088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-605
               

               
Cow position:
               
chr23:30338167-30338430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
342-707
               

               
Cow position:
               
chr23:38580954-38581317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
209, 128
               

               
Conread position:
               
342-751
               

               
Cow position:
               
chr23:8308672-8308255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
228, 308
               

               
Conread position:
               
342-764
               

               
Cow position:
               
chr23:1604878-1605306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 82
               

               
Conread position:
               
342-889
               

               
Cow position:
               
chr23:25865028-25864494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 78
               

               
Conread position:
               
342-889
               

               
Cow position:
               
chr23:34315317-34314752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
342-890
               

               
Cow position:
               
chr23:21789120-21788567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 297
               

               
Conread position:
               
342-891
               

               
Cow position:
               
chr23:24509354-24509886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 121
               

               
Conread position:
               
342-891
               

               
Cow position:
               
chr23:34356309-34356843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 121
               

               
Conread position:
               
342-897
               

               
Cow position:
               
chr23:2179996-2179454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
292, 174
               

               
Conread position:
               
342-900
               

               
Cow position:
               
chr23:2502213-2501646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
343-891
               

               
Cow position:
               
chr23:38455533-38454961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 163
               

               
Conread position:
               
344-808
               

               
Cow position:
               
chr23:10014201-10014653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 76
               

               
Conread position:
               
346-609
               

               
Cow position:
               
chr23:14642542-14642278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
221, 112
               

               
Conread position:
               
346-654
               

               
Cow position:
               
chr23:32007562-32007249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
197, 179
               

               
Conread position:
               
346-672
               

               
Cow position:
               
chr23:13514836-13515149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
346-673
               

               
Cow position:
               
chr23:12896952-12896622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
346-758
               

               
Cow position:
               
chr23:32309336-32309757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 166
               

               
Conread position:
               
347-466
               

               
Cow position:
               
chr23:18091193-18091312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-664
               

               
Cow position:
               
chr23:29824408-29824090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
347-772
               

               
Cow position:
               
chr23:32555519-32555086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
180, 160
               

               
Conread position:
               
347-825
               

               
Cow position:
               
chr23:35369354-35368906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 116
               

               
Conread position:
               
347-898
               

               
Cow position:
               
chr23:26841112-26841631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
349-720
               

               
Cow position:
               
chr23:27378134-27378513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
204, 302
               

               
Conread position:
               
350-541
               

               
Cow position:
               
chr23:208502-208686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
350-551
               

               
Cow position:
               
chr23:11965451-11965250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 126
               

               
Conread position:
               
350-568
               

               
Cow position:
               
chr23:6442624-6442406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr23:11399761-11400017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
195, 189
               

               
Conread position:
               
350-648
               

               
Cow position:
               
chr23:26319078-26319382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
350-661
               

               
Cow position:
               
chr23:15729028-15728716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
350-662
               

               
Cow position:
               
chr23:1321532-1321226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 70
               

               
Conread position:
               
350-662
               

               
Cow position:
               
chr23:38934362-38934043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 309
               

               
Conread position:
               
350-663
               

               
Cow position:
               
chr23:4531919-4531588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
350-705
               

               
Cow position:
               
chr23:41285595-41285938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 57
               

               
Conread position:
               
350-716
               

               
Cow position:
               
chr23:30334470-30334099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
203, 63
               

               
Conread position:
               
350-754
               

               
Cow position:
               
chr23:8327321-8327736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 304
               

               
Conread position:
               
350-754
               

               
Cow position:
               
chr23:32657561-32657973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
105, 302
               

               
Conread position:
               
350-764
               

               
Cow position:
               
chr23:3286616-3287040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 302
               

               
Conread position:
               
350-897
               

               
Cow position:
               
chr23:8005914-8006450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 63
               

               
Conread position:
               
351-537
               

               
Cow position:
               
chr23:39813109-39813293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
351-653
               

               
Cow position:
               
chr23:3717034-3717351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
106, 166
               

               
Conread position:
               
351-654
               

               
Cow position:
               
chr23:11084007-11083705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 226
               

               
Conread position:
               
351-891
               

               
Cow position:
               
chr23:37065501-37066059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 29
               

               
Conread position:
               
352-563
               

               
Cow position:
               
chr23:1696490-1696695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
352-705
               

               
Cow position:
               
chr23:29175650-29175995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
200, 74
               

               
Conread position:
               
352-890
               

               
Cow position:
               
chr23:5162088-5162643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
352-900
               

               
Cow position:
               
chr23:39778077-39778609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 69
               

               
Conread position:
               
353-539
               

               
Cow position:
               
chr23:22574396-22574212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
353-688
               

               
Cow position:
               
chr23:14191214-14191556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 83
               

               
Conread position:
               
353-809
               

               
Cow position:
               
chr23:2799232-2799700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 20
               

               
Conread position:
               
353-817
               

               
Cow position:
               
chr23:4529230-4528751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 433
               

               
Conread position:
               
353-896
               

               
Cow position:
               
chr23:39255083-39254535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
353-897
               

               
Cow position:
               
chr23:22298354-22297821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 105
               

               
Conread position:
               
354-564
               

               
Cow position:
               
chr23:16170360-16170567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
354-896
               

               
Cow position:
               
chr23:39752777-39753308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 275
               

               
Conread position:
               
355-587
               

               
Cow position:
               
chr23:5883185-5883413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
355-663
               

               
Cow position:
               
chr23:25408502-25408814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
356-877
               

               
Cow position:
               
chr23:29471449-29470953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 33
               

               
Conread position:
               
356-891
               

               
Cow position:
               
chr23:1337649-1337105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
361-550
               

               
Cow position:
               
chr23:1664361-1664547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
361-565
               

               
Cow position:
               
chr23:11404596-11404387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
363-762
               

               
Cow position:
               
chr23:40862024-40862421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
207, 57
               

               
Conread position:
               
364-892
               

               
Cow position:
               
chr23:6223683-6224171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
365-658
               

               
Cow position:
               
chr23:3745278-3745583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
373-549
               

               
Cow position:
               
chr23:4819067-4819242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
374-515
               

               
Cow position:
               
chr23:1922384-1922244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
374-546
               

               
Cow position:
               
chr23:7360620-7360791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
374-546
               

               
Cow position:
               
chr23:39780295-39780468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
374-548
               

               
Cow position:
               
chr23:2408094-2407924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
374-551
               

               
Cow position:
               
chr23:25192861-25193038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
374-654
               

               
Cow position:
               
chr23:3904668-3904950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
374-728
               

               
Cow position:
               
chr23:21624013-21623651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
374-734
               

               
Cow position:
               
chr23:39309431-39309062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
374-804
               

               
Cow position:
               
chr23:1905711-1906159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 321
               

               
Conread position:
               
374-897
               

               
Cow position:
               
chr23:10085497-10084975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
375-568
               

               
Cow position:
               
chr23:35366411-35366225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
375-896
               

               
Cow position:
               
chr23:11995971-11996492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
376-551
               

               
Cow position:
               
chr23:28059538-28059713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-725
               

               
Cow position:
               
chr23:19948070-19947714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
377-776
               

               
Cow position:
               
chr23:4980852-4980457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
378-569
               

               
Cow position:
               
chr23:26462162-26461975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
379-568
               

               
Cow position:
               
chr23:1610530-1610728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
379-659
               

               
Cow position:
               
chr23:1745380-1745657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
380-662
               

               
Cow position:
               
chr23:6568985-6569279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
380-678
               

               
Cow position:
               
chr23:587085-587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
190, 38
               

               
Conread position:
               
380-720
               

               
Cow position:
               
chr23:20752702-20753050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 78
               

               
Conread position:
               
380-815
               

               
Cow position:
               
chr23:36172235-36172651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
381-552
               

               
Cow position:
               
chr23:4903271-4903439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
381-568
               

               
Cow position:
               
chr23:7937846-7937670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
381-762
               

               
Cow position:
               
chr23:16563533-16563914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
384-660
               

               
Cow position:
               
chr23:22660873-22660607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
385-723
               

               
Cow position:
               
chr23:3449952-3449603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
168, 286
               

               
Conread position:
               
385-897
               

               
Cow position:
               
chr23:3247285-3247798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
387-631
               

               
Cow position:
               
chr23:29329787-29330050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
387-808
               

               
Cow position:
               
chr23:29459398-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
390-538
               

               
Cow position:
               
chr23:13674215-13674071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
390-897
               

               
Cow position:
               
chr23:31601759-31601241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 266
               

               
Conread position:
               
390-900
               

               
Cow position:
               
chr23:4726501-4727003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
391-568
               

               
Cow position:
               
chr23:13600519-13600342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-568
               

               
Cow position:
               
chr23:20605580-20605401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
392-655
               

               
Cow position:
               
chr23:19316183-19315908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
392-891
               

               
Cow position:
               
chr23:1428518-1429027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
393-603
               

               
Cow position:
               
chr23:25001094-25000880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
393-662
               

               
Cow position:
               
chr23:27862030-27862311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
393-821
               

               
Cow position:
               
chr23:13599050-13599477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 50
               

               
Conread position:
               
398-652
               

               
Cow position:
               
chr23:17461947-17462193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
398-880
               

               
Cow position:
               
chr23:29626121-29626617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 265
               

               
Conread position:
               
400-549
               

               
Cow position:
               
chr23:5143891-5143742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
400-568
               

               
Cow position:
               
chr23:1545926-1546088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
400-812
               

               
Cow position:
               
chr23:20171288-20171705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
165, 31
               

               
Conread position:
               
400-826
               

               
Cow position:
               
chr23:1690497-1690913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
161, 235
               

               
Conread position:
               
401-605
               

               
Cow position:
               
chr23:19251628-19251422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
402-568
               

               
Cow position:
               
chr23:1409672-1409506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
402-571
               

               
Cow position:
               
chr23:4544414-4544245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
402-688
               

               
Cow position:
               
chr23:33233194-33232906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
404-549
               

               
Cow position:
               
chr23:13547234-13547088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
404-900
               

               
Cow position:
               
chr23:8293213-8293722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
405-631
               

               
Cow position:
               
chr23:3140577-3140811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
406-568
               

               
Cow position:
               
chr23:7836770-7836608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 98
               

               
Conread position:
               
406-813
               

               
Cow position:
               
chr23:22396723-22396320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
407-812
               

               
Cow position:
               
chr23:35363055-35362654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
407-832
               

               
Cow position:
               
chr23:38208429-38208870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
407-877
               

               
Cow position:
               
chr23:4972502-4972953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
408-549
               

               
Cow position:
               
chr23:33190954-33190814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
410-900
               

               
Cow position:
               
chr23:13555707-13555222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
413-678
               

               
Cow position:
               
chr23:1605401-1605669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 135
               

               
Conread position:
               
413-744
               

               
Cow position:
               
chr23:3918376-3918037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 262
               

               
Conread position:
               
417-897
               

               
Cow position:
               
chr23:11315288-11314811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
418-595
               

               
Cow position:
               
chr23:8918126-8917940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
418-758
               

               
Cow position:
               
chr23:36309154-36309492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
418-792
               

               
Cow position:
               
chr23:3262772-3262392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 95
               

               
Conread position:
               
419-569
               

               
Cow position:
               
chr23:28945202-28945349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
421-897
               

               
Cow position:
               
chr23:186901-187388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 258
               

               
Conread position:
               
424-550
               

               
Cow position:
               
chr23:14580760-14580635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
424-565
               

               
Cow position:
               
chr23:769856-769716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
424-672
               

               
Cow position:
               
chr23:7289472-7289225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
425-568
               

               
Cow position:
               
chr23:20025906-20026043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
425-650
               

               
Cow position:
               
chr23:36199027-36199257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
425-656
               

               
Cow position:
               
chr23:21343512-21343277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
425-666
               

               
Cow position:
               
chr23:20781556-20781804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
425-709
               

               
Cow position:
               
chr23:4338874-4338588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
14, 193
               

               
Conread position:
               
425-720
               

               
Cow position:
               
chr23:16664816-16664536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
425-755
               

               
Cow position:
               
chr23:25358465-25358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
425-825
               

               
Cow position:
               
chr23:11045220-11045624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
425-841
               

               
Cow position:
               
chr23:5539916-5540297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
425-891
               

               
Cow position:
               
chr23:29242676-29243134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 215
               

               
Conread position:
               
425-895
               

               
Cow position:
               
chr23:8063287-8063734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
425-895
               

               
Cow position:
               
chr23:21445859-21446320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
426-557
               

               
Cow position:
               
chr23:34612049-34611922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
426-591
               

               
Cow position:
               
chr23:2041555-2041720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
426-603
               

               
Cow position:
               
chr23:29742119-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
426-623
               

               
Cow position:
               
chr23:38414222-38414023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
426-635
               

               
Cow position:
               
chr23:14662261-14662053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
426-654
               

               
Cow position:
               
chr23:11932970-11933196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
426-654
               

               
Cow position:
               
chr23:28700737-28700967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 106
               

               
Conread position:
               
426-790
               

               
Cow position:
               
chr23:17404587-17404942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
426-803
               

               
Cow position:
               
chr23:9652732-9652370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
72, 95
               
UCSC Genome Browser

               
Conread position:
               
426-825
               

               
Cow position:
               
chr23:29034047-29034451 (view  custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 241
               
UCSC Genome Browser

               
               
               
Conread position:
426-886

               
               
               
Cow position:
chr23:4968784-4968334 (view  custom track)

               
               
               
Alignm length:
472

               
               
               
Alignm identity:
333

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
127, 37
UCSC Genome Browser

               
               
               
Conread position:
426-896

               
               
               
Cow position:
chr23:3967812-3967347 (view  custom track)

               
               
               
Alignm length:
484

               
               
               
Alignm identity:
327

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
109, 44

               
               
               Conread position:426-896
               
               
               Cow position:chr23:16881422-16880962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:475
               
               
               Alignm identity:365
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):132, 75

               
               
               Conread position:426-898
               
               
               Cow position:chr23:26795169-26794703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:480
               
               
               Alignm identity:328
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):135, 159

               
               
               Conread position:427-882
               
               
               Cow position:chr23:26948926-26949384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:473
               
               
               Alignm identity:325
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 242

               
               
               Conread position:428-663
               
               
               Cow position:chr23:9421206-9420980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):36, 103

               
               
               Conread position:428-687
               
               
               Cow position:chr23:22588533-22588265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):116, 110

               
               
               Conread position:429-803
               
               
               Cow position:chr23:17092750-17092381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:246
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):181, 155

               
               
               Conread position:430-652
               
               
               Cow position:chr23:12408772-12408541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):93, 80

               
               
               Conread position:430-654
               
               
               Cow position:chr23:19538255-19538024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:161
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):140, 0

               
               
               Conread position:430-816
               
               
               Cow position:chr23:20388897-20388526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:244
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):172, 33

               
               
               Conread position:430-880
               
               
               Cow position:chr23:20195179-20194739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 225

               
               
               Conread position:430-900
               
               
               Cow position:chr23:5617318-5617786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:483
               
               
               Alignm identity:321
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 34

               
               
               Conread position:431-896
               
               
               Cow position:chr23:33711512-33711969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:472
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):113, 22

               
               
               Conread position:432-709
               
               
               Cow position:chr23:15056900-15056619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 31

               
               
               Conread position:432-891
               
               
               Cow position:chr23:15287393-15286949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):138, 224

               
               
               Conread position:433-661
               
               
               Cow position:chr23:1991685-1991450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):102, 167

               
               
               Conread position:433-743
               
               
               Cow position:chr23:20057125-20056810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 239

               
               
               Conread position:433-882
               
               
               Cow position:chr23:6172920-6172493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:305
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):137, 91

               
               
               Conread position:434-550
               
               
               Cow position:chr23:3434205-3434091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:434-683
               
               
               Cow position:chr23:2259855-2259595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:196
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):5, 31

               
               
               Conread position:434-726
               
               
               Cow position:chr23:1803537-1803826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):136, 33

               
               
               Conread position:434-895
               
               
               Cow position:chr23:16583166-16582701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:473
               
               
               Alignm identity:340
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):107, 235

               
               
               Conread position:435-626
               
               
               Cow position:chr23:4740735-4740526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:435-875
               
               
               Cow position:chr23:6244843-6244416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:322
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 167

               
               
               Conread position:435-882
               
               
               Cow position:chr23:29346015-29345584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:305
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):135, 28

               
               
               Conread position:436-553
               
               
               Cow position:chr23:5744842-5744959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:436-646
               
               
               Cow position:chr23:1878126-1877911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):112, 171

               
               
               Conread position:436-662
               
               
               Cow position:chr23:808907-809146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:172
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):37, 82

               
               
               Conread position:436-685
               
               
               Cow position:chr23:23884395-23884149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):134, 101

               
               
               Conread position:436-688
               
               
               Cow position:chr23:38854989-38854733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:193
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):99, 50

               
               
               Conread position:436-875
               
               
               Cow position:chr23:21452988-21452546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:327
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 99

               
               
               Conread position:436-878
               
               
               Cow position:chr23:26632545-26632989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:323
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 27

               
               
               Conread position:436-882
               
               
               Cow position:chr23:39302460-39302887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:302
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):164, 131

               
               
               Conread position:437-568
               
               
               Cow position:chr23:7221268-7221137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:99
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:437-607
               
               
               Cow position:chr23:5395679-5395499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:138
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):129, 155

               
               
               Conread position:437-658
               
               
               Cow position:chr23:23284892-23285110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):158, 58

               
               
               Conread position:437-662
               
               
               Cow position:chr23:19979202-19978972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):28, 183

               
               
               Conread position:437-681
               
               
               Cow position:chr23:6179960-6179716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):68, 147

               
               
               Conread position:437-897
               
               
               Cow position:chr23:4810496-4810948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:474
               
               
               Alignm identity:306
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):98, 215

               
               
               Conread position:437-900
               
               
               Cow position:chr23:2282428-2281977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:475
               
               
               Alignm identity:349
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):130, 60

               
               
               Conread position:438-565
               
               
               Cow position:chr23:3715512-3715638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:98
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:438-820
               
               
               Cow position:chr23:37224319-37223941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:251
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):129, 96

               
               
               Conread position:439-769
               
               
               Cow position:chr23:33940408-33940075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:235
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):45, 143

               
               
               Conread position:440-897
               
               
               Cow position:chr23:33696026-33695553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:479
               
               
               Alignm identity:314
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):126, 214

               
               
               Conread position:441-665
               
               
               Cow position:chr23:38248650-38248873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):106, 84

               
               
               Conread position:441-772
               
               
               Cow position:chr23:2417206-2417539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:230
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):90, 8

               
               
               Conread position:441-794
               
               
               Cow position:chr23:4562638-4562993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:247
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):128, 16

               
               
               Conread position:441-875
               
               
               Cow position:chr23:9599252-9599674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 178

               
               
               Conread position:442-720
               
               
               Cow position:chr23:670370-670653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):5, 212

               
               
               Conread position:443-794
               
               
               Cow position:chr23:15872949-15872585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:245
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):73, 78

               
               
               Conread position:443-824
               
               
               Cow position:chr23:18402534-18402155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 84

               
               
               Conread position:443-897
               
               
               Cow position:chr23:41348896-41348419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:487
               
               
               Alignm identity:323
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):103, 20

               
               
               Conread position:444-824
               
               
               Cow position:chr23:33717791-33717407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):122, 230

               
               
               Conread position:446-808
               
               
               Cow position:chr23:16700284-16699922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):89, 70

               
               
               Conread position:446-864
               
               
               Cow position:chr23:6767647-6768084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):107, 7

               
               
               Conread position:446-897
               
               
               Cow position:chr23:26849146-26848685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:468
               
               
               Alignm identity:306
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):135, 51

               
               
               Conread position:447-739
               
               
               Cow position:chr23:2055458-2055757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:219
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):109, 102

               
               
               Conread position:448-819
               
               
               Cow position:chr23:5706756-5707124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 80

               
               
               Conread position:449-900
               
               
               Cow position:chr23:1885418-1884962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:318
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 222

               
               
               Conread position:450-786
               
               
               Cow position:chr23:36076062-36075712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:232
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):47, 32

               
               
               Conread position:450-900
               
               
               Cow position:chr23:24704033-24704494 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:476
               
               
               Alignm identity:328
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 82

               
               
               Conread position:451-803
               
               
               Cow position:chr23:40891122-40891479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:239
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):97, 12

               
               
               Conread position:454-762
               
               
               Cow position:chr23:10868524-10868841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:220
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):97, 85

               
               
               Conread position:454-793
               
               
               Cow position:chr23:27544595-27544934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 208

               
               
               Conread position:456-788
               
               
               Cow position:chr23:12050130-12050458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:236
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):85, 151

               
               
               Conread position:456-880
               
               
               Cow position:chr23:10416658-10416237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 206

               
               
               Conread position:457-650
               
               
               Cow position:chr23:25189105-25189311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):12, 39

               
               
               Conread position:457-657
               
               
               Cow position:chr23:35254472-35254264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:457-682
               
               
               Cow position:chr23:11080847-11081073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:161
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):109, 61

               
               
               Conread position:457-761
               
               
               Cow position:chr23:6367371-6367685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):113, 200

               
               
               Conread position:457-802
               
               
               Cow position:chr23:5603505-5603169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:234
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):113, 67

               
               
               Conread position:457-891
               
               
               Cow position:chr23:15742865-15743293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 59

               
               
               Conread position:457-900
               
               
               Cow position:chr23:32105638-32106080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:464
               
               
               Alignm identity:302
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):94, 69

               
               
               Conread position:459-885
               
               
               Cow position:chr23:10876197-10876596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:274
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):279, 35

               
               
               Conread position:460-735
               
               
               Cow position:chr23:7484848-7485119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):90, 60

               
               
               Conread position:471-899
               
               
               Cow position:chr23:20558079-20557632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:296
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):62, 215

               
               
               Conread position:472-855
               
               
               Cow position:chr23:1489837-1490204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:252
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):87, 50

               
               
               Conread position:472-882
               
               
               Cow position:chr23:4504608-4505005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:288
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):98, 217

               
               
               Conread position:473-662
               
               
               Cow position:chr23:1068531-1068334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):59, 176

               
               
               Conread position:474-896
               
               
               Cow position:chr23:29801215-29801642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:280
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):79, 43

               
               
               Conread position:476-900
               
               
               Cow position:chr23:5723328-5723739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:292
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):59, 204

               
               
               Conread position:477-891
               
               
               Cow position:chr23:2457248-2457633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:296
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):89, 145

               
               
               Conread position:477-897
               
               
               Cow position:chr23:18902265-18901858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 180

               
               
               Conread position:478-720
               
               
               Cow position:chr23:3955208-3955451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:173
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):43, 83

               
               
               Conread position:478-820
               
               
               Cow position:chr23:40648941-40648599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:241
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):92, 130

               
               
               Conread position:479-820
               
               
               Cow position:chr23:18296595-18296939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:243
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):56, 196

               
               
               Conread position:479-835
               
               
               Cow position:chr23:21764705-21765062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):74, 285

               
               
               Conread position:479-900
               
               
               Cow position:chr23:40789773-40790176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):214, 146

               
               
               Conread position:480-793
               
               
               Cow position:chr23:22399190-22399512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:222
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):86, 145

               
               
               Conread position:481-808
               
               
               Cow position:chr23:1742147-1742473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:229
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):67, 40

               
               
               Conread position:481-828
               
               
               Cow position:chr23:23409536-23409869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:241
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):77, 58

               
               
               Conread position:482-900
               
               
               Cow position:chr23:1776840-1776442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 45

               
               
               Conread position:483-897
               
               
               Cow position:chr23:30585870-30585439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 311

               
               
               Conread position:486-889
               
               
               Cow position:chr23:3191329-3190927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:411
               
               
               Alignm identity:257
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):59, 47

               
               
               Conread position:486-896
               
               
               Cow position:chr23:4646308-4646713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:416
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):99, 182

               
               
               Conread position:486-897
               
               
               Cow position:chr23:24930278-24929860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:268
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):112, 164

               
               
               Conread position:487-753
               
               
               Cow position:chr23:39323653-39323910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):171, 58

               
               
               Conread position:489-886
               
               
               Cow position:chr23:20248902-20248497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:412
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 177

               
               
               Conread position:489-891
               
               
               Cow position:chr23:29786555-29786141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:277
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):81, 37

               
               
               Conread position:491-891
               
               
               Cow position:chr23:40443665-40444058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:259
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):88, 95

               
               
               Conread position:491-897
               
               
               Cow position:chr23:36017942-36018374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:276
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):79, 187

               
               
               Conread position:492-874
               
               
               Cow position:chr23:1189101-1188735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:255
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):74, 50

               
               
               Conread position:493-769
               
               
               Cow position:chr23:30999377-30999647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):77, 170

               
               
               Conread position:493-891
               
               
               Cow position:chr23:5451123-5451524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):74, 173

               
               
               Conread position:494-900
               
               
               Cow position:chr23:38973649-38974046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:272
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):54, 36

               
               
               Conread position:495-877
               
               
               Cow position:chr23:1585585-1585211 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:273
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):74, 131

               
               
               Conread position:495-897
               
               
               Cow position:chr23:16847766-16848182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:270
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):70, 149

               
               
               Conread position:495-898
               
               
               Cow position:chr23:5426231-5426646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 172

               
               
               Conread position:496-889
               
               
               Cow position:chr23:8923408-8923799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:274
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):55, 109

               
               
               Conread position:497-769
               
               
               Cow position:chr23:19371265-19370992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):26, 39

               
               
               Conread position:498-870
               
               
               Cow position:chr23:24944835-24944462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:245
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):82, 57

               
               
               Conread position:498-891
               
               
               Cow position:chr23:33569942-33570333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:276
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):67, 168

               
               
               Conread position:502-828
               
               
               Cow position:chr23:40844460-40844789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:232
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):49, 103

               
               
               Conread position:503-817
               
               
               Cow position:chr23:2488173-2487862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:228
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):64, 137

               
               
               Conread position:503-896
               
               
               Cow position:chr23:39813321-39813710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:267
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):41, 56

               
               
               Conread position:507-890
               
               
               Cow position:chr23:3282299-3281909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 112

               
               
               Conread position:507-897
               
               
               Cow position:chr23:22414497-22414101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:412
               
               
               Alignm identity:271
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):54, 26

               
               
               Conread position:515-815
               
               
               Cow position:chr23:4104229-4104522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):33, 126

               
               
               Conread position:522-891
               
               
               Cow position:chr23:12334037-12334424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:266
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):45, 14

               
               
               Conread position:522-896
               
               
               Cow position:chr23:18286038-18286389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:525-896
               
               
               Cow position:chr23:16744377-16744749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:258
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):38, 110

               
               
               Conread position:526-816
               
               
               Cow position:chr23:1767661-1767960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:209
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):41, 138

               
               
               Conread position:531-829
               
               
               Cow position:chr23:29069602-29069297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:198
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):39, 139

               
               
               Conread position:533-796
               
               
               Cow position:chr23:35938191-35938455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):96, 65

               
               
               Conread position:537-803
               
               
               Cow position:chr23:26050889-26051155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):124, 118

               
               
               Conread position:537-891
               
               
               Cow position:chr23:24966607-24966259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 80

               
               
               Conread position:538-883
               
               
               Cow position:chr23:5437143-5436807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:244
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):38, 12

               
               
               Conread position:543-828
               
               
               Cow position:chr23:28945205-28944927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):183, 112

               
               
               Conread position:544-815
               
               
               Cow position:chr23:30950820-30951084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):226, 54

               
               
               Conread position:545-889
               
               
               Cow position:chr23:16797949-16797611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:229
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):25, 241

               
               
               Conread position:547-688
               
               
               Cow position:chr23:24809802-24809661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:106
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:550-882
               
               
               Cow position:chr23:32480170-32479824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:234
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):29, 264

               
               
               Conread position:551-824
               
               
               Cow position:chr23:39780627-39780890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:560-897
               
               
               Cow position:chr23:14394545-14394877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:234
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):16, 39

               
               
               Conread position:563-668
               
               
               Cow position:chr23:209002-209108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:89
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:564-897
               
               
               Cow position:chr23:307338-307667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:228
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):106, 32

               
               
               Conread position:565-688
               
               
               Cow position:chr23:9132562-9132444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:565-734
               
               
               Cow position:chr23:2801803-2801635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:121
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:565-807
               
               
               Cow position:chr23:19774655-19774889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:565-824
               
               
               Cow position:chr23:4329800-4329536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):11, 208

               
               
               Conread position:565-825
               
               
               Cow position:chr23:16076278-16076030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:195
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):147, 24

               
               
               Conread position:565-880
               
               
               Cow position:chr23:5795359-5795667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:565-891
               
               
               Cow position:chr23:6148176-6147851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:242
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):60, 132

               
               
               Conread position:565-891
               
               
               Cow position:chr23:9226155-9226476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:232
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):11, 113

               
               
               Conread position:565-894
               
               
               Cow position:chr23:3409023-3408697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):86, 31

               
               
               Conread position:565-896
               
               
               Cow position:chr23:12363737-12363413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:565-900
               
               
               Cow position:chr23:1438178-1438488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:241
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):92, 26

               
               
               Conread position:565-900
               
               
               Cow position:chr23:5732431-5732748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:566-763
               
               
               Cow position:chr23:1634567-1634758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:566-824
               
               
               Cow position:chr23:21502755-21502493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):149, 41

               
               
               Conread position:566-891
               
               
               Cow position:chr23:1583413-1583719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:212
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:567-891
               
               
               Cow position:chr23:799783-799464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:230
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):159, 25

               
               
               Conread position:567-891
               
               
               Cow position:chr23:33153306-33152993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:215
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):173, 85

               
               
               Conread position:568-758
               
               
               Cow position:chr23:1921341-1921155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:568-821
               
               
               Cow position:chr23:33622266-33622017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:568-825
               
               
               Cow position:chr23:4966705-4966957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):97, 25

               
               
               Conread position:568-882
               
               
               Cow position:chr23:18416162-18415864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:218
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):219, 76

               
               
               Conread position:568-891
               
               
               Cow position:chr23:11081143-11081460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:221
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):190, 21

               
               
               Conread position:568-897
               
               
               Cow position:chr23:3245031-3244706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):249, 95

               
               
               Conread position:568-897
               
               
               Cow position:chr23:3890680-3890364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:228
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):212, 70

               
               
               Conread position:568-897
               
               
               Cow position:chr23:5436756-5436431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:231
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):85, 48

               
               
               Conread position:568-900
               
               
               Cow position:chr23:12091474-12091148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):198, 77

               
               
               Conread position:569-882
               
               
               Cow position:chr23:283502-283209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):91, 29

               
               
               Conread position:570-807
               
               
               Cow position:chr23:1876597-1876832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:570-881
               
               
               Cow position:chr23:40348755-40348454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:210
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):47, 59

               
               
               Conread position:570-900
               
               
               Cow position:chr23:11212392-11212715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:225
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:575-790
               
               
               Cow position:chr23:24984275-24984066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):185, 25

               
               
               Conread position:575-891
               
               
               Cow position:chr23:1222348-1222038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):308, 224

               
               
               Conread position:577-796
               
               
               Cow position:chr23:4795066-4795279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:577-877
               
               
               Cow position:chr23:19221756-19221453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):19, 74

               
               
               Conread position:578-825
               
               
               Cow position:chr23:39275784-39276033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):191, 52

               
               
               Conread position:578-853
               
               
               Cow position:chr23:306419-306689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):92, 18

               
               
               Conread position:578-880
               
               
               Cow position:chr23:349830-349530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:193
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):188, 86

               
               
               Conread position:578-896
               
               
               Cow position:chr23:22574022-22573698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:223
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):133, 74

               
               
               Conread position:578-897
               
               
               Cow position:chr23:8837791-8837481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):236, 40

               
               
               Conread position:578-899
               
               
               Cow position:chr23:35239242-35239561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:226
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):113, 81

               
               
               Conread position:579-859
               
               
               Cow position:chr23:1701066-1701344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):239, 84

               
               
               Conread position:579-894
               
               
               Cow position:chr23:24685147-24685445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:227
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:580-879
               
               
               Cow position:chr23:15280602-15280305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):238, 79

               
               
               Conread position:581-860
               
               
               Cow position:chr23:18036760-18036484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):47, 51

               
               
               Conread position:581-886
               
               
               Cow position:chr23:769652-769344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):133, 24

               
               
               Conread position:581-889
               
               
               Cow position:chr23:10497606-10497896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:217
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):252, 47

               
               
               Conread position:583-809
               
               
               Cow position:chr23:1697575-1697796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:158
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):12, 52

               
               
               Conread position:592-798
               
               
               Cow position:chr23:1403896-1403694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:594-856
               
               
               Cow position:chr23:8917764-8917514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):260, 133

               
               
               Conread position:597-882
               
               
               Cow position:chr23:17486913-17486634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):82, 66

               
               
               Conread position:598-819
               
               
               Cow position:chr23:20002169-20002384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):81, 57

               
               
               Conread position:598-877
               
               
               Cow position:chr23:2358806-2359064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):139, 50

               
               
               Conread position:598-891
               
               
               Cow position:chr23:385398-385105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 153

               
               
               Conread position:598-891
               
               
               Cow position:chr23:24926726-24927028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):220, 150

               
               
               Conread position:598-899
               
               
               Cow position:chr23:3293606-3293901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:219
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):64, 186

               
               
               Conread position:599-897
               
               
               Cow position:chr23:38264618-38264320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:199
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):93, 66

               
               
               Conread position:600-794
               
               
               Cow position:chr23:5237512-5237312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):103, 15

               
               
               Conread position:600-886
               
               
               Cow position:chr23:18238610-18238327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:194
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):186, 45

               
               
               Conread position:601-824
               
               
               Cow position:chr23:21440084-21439865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):126, 0

               
               
               Conread position:601-900
               
               
               Cow position:chr23:14523901-14524209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:220
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):46, 77

               
               
               Conread position:605-896
               
               
               Cow position:chr23:11224779-11225061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:605-897
               
               
               Cow position:chr23:20539304-20539586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:210
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):155, 194

               
               
               Conread position:605-898
               
               
               Cow position:chr23:3430990-3431296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):172, 114

               
               
               Conread position:607-890
               
               
               Cow position:chr23:5881595-5881320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:607-898
               
               
               Cow position:chr23:33628849-33629131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):176, 192

               
               
               Conread position:612-882
               
               
               Cow position:chr23:1863400-1863653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):146, 155

               
               
               Conread position:612-900
               
               
               Cow position:chr23:18749137-18748865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:612-900
               
               
               Cow position:chr23:39330361-39330085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):152, 43

               
               
               Conread position:613-794
               
               
               Cow position:chr23:4470572-4470392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:613-891
               
               
               Cow position:chr23:16961225-16961488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):39, 53

               
               
               Conread position:616-808
               
               
               Cow position:chr23:349018-348828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):182, 0

               
               
               Conread position:616-882
               
               
               Cow position:chr23:40637188-40637457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):25, 44

               
               
               Conread position:616-891
               
               
               Cow position:chr23:35965075-35965351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:191
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:617-882
               
               
               Cow position:chr23:1981721-1981480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:195
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:617-897
               
               
               Cow position:chr23:18822925-18823192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:619-900
               
               
               Cow position:chr23:40275609-40275346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:621-763
               
               
               Cow position:chr23:5400603-5400745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):134, 49

               
               
               Conread position:621-817
               
               
               Cow position:chr23:1589523-1589720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:138
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:621-898
               
               
               Cow position:chr23:13202424-13202161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):32, 144

               
               
               Conread position:622-891
               
               
               Cow position:chr23:19565387-19565648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):224, 78

               
               
               Conread position:630-818
               
               
               Cow position:chr23:3244520-3244339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:632-831
               
               
               Cow position:chr23:35503732-35503918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):174, 27

               
               
               Conread position:634-879
               
               
               Cow position:chr23:2160685-2160452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:639-898
               
               
               Cow position:chr23:25990483-25990229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:641-897
               
               
               Cow position:chr23:4003597-4003858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):28, 147

               
               
               Conread position:645-891
               
               
               Cow position:chr23:31262848-31263103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):46, 147

               
               
               Conread position:647-880
               
               
               Cow position:chr23:20093282-20093053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:179
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):10, 68

               
               
               Conread position:647-898
               
               
               Cow position:chr23:1759209-1759457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:164
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):243, 16

               
               
               Conread position:654-900
               
               
               Cow position:chr23:35929916-35930159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:173
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):11, 116

               
               
               Conread position:656-879
               
               
               Cow position:chr23:22586850-22587068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:169
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:656-897
               
               
               Cow position:chr23:28798047-28798298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):145, 55

               
               
               Conread position:658-820
               
               
               Cow position:chr23:17231121-17231280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:660-823
               
               
               Cow position:chr23:18605433-18605270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):137, 69

               
               
               Conread position:660-891
               
               
               Cow position:chr23:13137962-13137737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):120, 107

               
               
               Conread position:661-900
               
               
               Cow position:chr23:7709765-7709992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):122, 0

               
               
               Conread position:664-882
               
               
               Cow position:chr23:22238844-22238627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):153, 195

               
               
               Conread position:665-828
               
               
               Cow position:chr23:5785823-5785984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):133, 0

               
               
               Conread position:665-900
               
               
               Cow position:chr23:4844585-4844823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:168
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):81, 116

               
               
               Conread position:667-891
               
               
               Cow position:chr23:3234801-3234575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):100, 107

               
               
               Conread position:670-896
               
               
               Cow position:chr23:1877912-1877691 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:162
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):130, 0

               
               
               Conread position:671-900
               
               
               Cow position:chr23:17597411-17597633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:166
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):126, 0

               
               
               Conread position:674-879
               
               
               Cow position:chr23:24779555-24779350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):150, 126

               
               
               Conread position:674-897
               
               
               Cow position:chr23:1194504-1194287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:674-900
               
               
               Cow position:chr23:22668517-22668303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):123, 0

               
               
               Conread position:676-891
               
               
               Cow position:chr23:35656401-35656611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:676-897
               
               
               Cow position:chr23:32621273-32621497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):62, 124

               
               
               Conread position:677-891
               
               
               Cow position:chr23:18739474-18739259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):58, 98

               
               
               Conread position:680-891
               
               
               Cow position:chr23:40738025-40737813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:150
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):80, 94

               
               
               Conread position:681-880
               
               
               Cow position:chr23:12405825-12405630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:681-899
               
               
               Cow position:chr23:40501103-40500887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):116, 102

               
               
               Conread position:682-891
               
               
               Cow position:chr23:5395480-5395281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:152
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:682-898
               
               
               Cow position:chr23:27848992-27849201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):118, 0

               
               
               Conread position:688-883
               
               
               Cow position:chr23:4343483-4343678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):125, 110

               
               
               Conread position:691-882
               
               
               Cow position:chr23:9131956-9131771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:692-891
               
               
               Cow position:chr23:24809432-24809235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):49, 37

               
               
               Conread position:692-896
               
               
               Cow position:chr23:7155687-7155495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:149
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:698-882
               
               
               Cow position:chr23:1480652-1480835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):88, 6

               
               
               Conread position:698-883
               
               
               Cow position:chr23:21423779-21423960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:135
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:698-891
               
               
               Cow position:chr23:20397452-20397265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):116, 22

               
               
               Conread position:698-894
               
               
               Cow position:chr23:10888286-10888473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:698-896
               
               
               Cow position:chr23:809517-809714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:145
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):68, 89

               
               
               Conread position:698-896
               
               
               Cow position:chr23:6672624-6672421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):68, 76

               
               
               Conread position:698-896
               
               
               Cow position:chr23:39108944-39109143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):68, 85

               
               
               Conread position:699-890
               
               
               Cow position:chr23:33232689-33232499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):119, 83

               
               
               Conread position:699-891
               
               
               Cow position:chr23:30867286-30867097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):67, 42

               
               
               Conread position:699-900
               
               
               Cow position:chr23:29330320-29330521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):61, 84

               
               
               Conread position:700-891
               
               
               Cow position:chr23:38041-38232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):60, 73

               
               
               Conread position:700-891
               
               
               Cow position:chr23:5686183-5685994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:700-900
               
               
               Cow position:chr23:204294-204501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):77, 191

               
               
               Conread position:700-900
               
               
               Cow position:chr23:6179532-6179337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:145
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:701-891
               
               
               Cow position:chr23:21628174-21628366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):8, 74

               
               
               Conread position:701-891
               
               
               Cow position:chr23:24718787-24718601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:701-900
               
               
               Cow position:chr23:39864667-39864867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):107, 51

               
               
               Conread position:704-890
               
               
               Cow position:chr23:16664384-16664202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:705-900
               
               
               Cow position:chr23:15056553-15056361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):179, 93

               
               
               Conread position:711-896
               
               
               Cow position:chr23:2395573-2395391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):64, 56

               
               
               Conread position:711-897
               
               
               Cow position:chr23:4416263-4416076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):99, 72

               
               
               Conread position:711-897
               
               
               Cow position:chr23:23104462-23104279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):171, 14

               
               
               Conread position:711-899
               
               
               Cow position:chr23:1510902-1510718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:713-882
               
               
               Cow position:chr23:5603719-5603554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:714-897
               
               
               Cow position:chr23:16647350-16647533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):52, 69

               
               
               Conread position:718-879
               
               
               Cow position:chr23:36022757-36022602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:718-897
               
               
               Cow position:chr23:33702363-33702183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):100, 17

               
               
               Conread position:719-897
               
               
               Cow position:chr23:20725655-20725483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:130
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:725-900
               
               
               Cow position:chr23:35527118-35527292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):41, 48

               
               
               Conread position:726-893
               
               
               Cow position:chr23:10844595-10844762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):93, 74

               
               
               Conread position:729-891
               
               
               Cow position:chr23:28814418-28814581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):7, 70

               
               
               Conread position:729-898
               
               
               Cow position:chr23:18822393-18822223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:736-896
               
               
               Cow position:chr23:13836769-13836930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):24, 38
Show alignments to all cow chromosomes.