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Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL010021F06.5
        

               
Conread position:
               
299-549
               

               
Cow position:
               
chr25:26187931-26187678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 248
               

               
Conread position:
               
300-764
               

               
Cow position:
               
chr25:36554605-36555078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 351
               

               
Conread position:
               
315-454
               

               
Cow position:
               
chr25:23325390-23325244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr25:15005819-15006022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
315-565
               

               
Cow position:
               
chr25:9625428-9625678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
315-568
               

               
Cow position:
               
chr25:26353147-26352893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
315-670
               

               
Cow position:
               
chr25:8482700-8482327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
315-675
               

               
Cow position:
               
chr25:28327474-28327099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
315-705
               

               
Cow position:
               
chr25:5514623-5515028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
315-882
               

               
Cow position:
               
chr25:6470601-6470018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
316-668
               

               
Cow position:
               
chr25:38972455-38972818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
250, 39
               

               
Conread position:
               
316-719
               

               
Cow position:
               
chr25:36779110-36779529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 157
               

               
Conread position:
               
320-650
               

               
Cow position:
               
chr25:9634549-9634868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
323-568
               

               
Cow position:
               
chr25:11051012-11051247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
323-719
               

               
Cow position:
               
chr25:18155223-18155627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
324-443
               

               
Cow position:
               
chr25:2595615-2595737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
324-489
               

               
Cow position:
               
chr25:2624270-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
324-544
               

               
Cow position:
               
chr25:26911130-26910907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
324-648
               

               
Cow position:
               
chr25:33839014-33839340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 208
               

               
Conread position:
               
324-804
               

               
Cow position:
               
chr25:20076125-20076609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
324-852
               

               
Cow position:
               
chr25:22530915-22531441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
324-882
               

               
Cow position:
               
chr25:10504710-10504147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
324-890
               

               
Cow position:
               
chr25:7641822-7641259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
325-897
               

               
Cow position:
               
chr25:26087143-26087723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
326-561
               

               
Cow position:
               
chr25:27621711-27621948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
328-568
               

               
Cow position:
               
chr25:9842637-9842873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
328-879
               

               
Cow position:
               
chr25:6948427-6947866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
329-821
               

               
Cow position:
               
chr25:38981741-38982223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
331-496
               

               
Cow position:
               
chr25:33263275-33263429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
331-505
               

               
Cow position:
               
chr25:5555590-5555420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
331-550
               

               
Cow position:
               
chr25:36869026-36869243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
175, 6
               

               
Conread position:
               
331-568
               

               
Cow position:
               
chr25:16691138-16691389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
331-663
               

               
Cow position:
               
chr25:27593935-27594272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 190
               

               
Conread position:
               
331-676
               

               
Cow position:
               
chr25:26757068-26757427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
331-693
               

               
Cow position:
               
chr25:40388820-40388462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
331-758
               

               
Cow position:
               
chr25:37594031-37594473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
5, 211
               

               
Conread position:
               
331-891
               

               
Cow position:
               
chr25:10643673-10643119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr25:39386195-39385840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
333-504
               

               
Cow position:
               
chr25:33735260-33735431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
333-511
               

               
Cow position:
               
chr25:32278390-32278213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
333-569
               

               
Cow position:
               
chr25:30621388-30621151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
334-541
               

               
Cow position:
               
chr25:4488374-4488577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
334-547
               

               
Cow position:
               
chr25:13132406-13132616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
189, 49
               

               
Conread position:
               
334-549
               

               
Cow position:
               
chr25:16409094-16408877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
334-558
               

               
Cow position:
               
chr25:7259186-7259412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 208
               

               
Conread position:
               
334-565
               

               
Cow position:
               
chr25:33025441-33025218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
334-568
               

               
Cow position:
               
chr25:16067900-16068134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
334-568
               

               
Cow position:
               
chr25:35585882-35585651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
334-669
               

               
Cow position:
               
chr25:10137745-10138072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
334-709
               

               
Cow position:
               
chr25:5792164-5791782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
334-731
               

               
Cow position:
               
chr25:5341289-5341693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
334-768
               

               
Cow position:
               
chr25:3145484-3145922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 154
               

               
Conread position:
               
334-882
               

               
Cow position:
               
chr25:3992428-3992968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 275
               

               
Conread position:
               
334-897
               

               
Cow position:
               
chr25:13840478-13839890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
335-565
               

               
Cow position:
               
chr25:16957517-16957292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
335-823
               

               
Cow position:
               
chr25:33256010-33256484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
336-568
               

               
Cow position:
               
chr25:12063997-12063765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 168
               

               
Conread position:
               
336-582
               

               
Cow position:
               
chr25:11480610-11480370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 59
               

               
Conread position:
               
336-771
               

               
Cow position:
               
chr25:34236940-34236498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
337-775
               

               
Cow position:
               
chr25:34672951-34672506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
136, 203
               

               
Conread position:
               
338-544
               

               
Cow position:
               
chr25:20434197-20434401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
338-626
               

               
Cow position:
               
chr25:25866578-25866851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
339-495
               

               
Cow position:
               
chr25:30268012-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
339-549
               

               
Cow position:
               
chr25:11294437-11294649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
339-563
               

               
Cow position:
               
chr25:6967127-6966907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
168, 126
               

               
Conread position:
               
339-565
               

               
Cow position:
               
chr25:10011075-10010852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
339-567
               

               
Cow position:
               
chr25:41385462-41385233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
339-657
               

               
Cow position:
               
chr25:26618097-26618427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
339-897
               

               
Cow position:
               
chr25:1837887-1838447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 81
               

               
Conread position:
               
339-897
               

               
Cow position:
               
chr25:6464384-6463824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
340-464
               

               
Cow position:
               
chr25:23913081-23912960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
340-468
               

               
Cow position:
               
chr25:16316439-16316565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
340-496
               

               
Cow position:
               
chr25:36962346-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
340-498
               

               
Cow position:
               
chr25:14255207-14255358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
340-504
               

               
Cow position:
               
chr25:21017827-21017665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
340-505
               

               
Cow position:
               
chr25:13122587-13122750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr25:14720130-14720294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
340-507
               

               
Cow position:
               
chr25:21041466-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
340-511
               

               
Cow position:
               
chr25:17992496-17992325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr25:11315273-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr25:17191485-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
340-524
               

               
Cow position:
               
chr25:33901732-33901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-528
               

               
Cow position:
               
chr25:16688605-16688417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-530
               

               
Cow position:
               
chr25:5042-5232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-539
               

               
Cow position:
               
chr25:13412074-13412274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
340-540
               

               
Cow position:
               
chr25:26938611-26938407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
340-541
               

               
Cow position:
               
chr25:14103942-14104136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
340-543
               

               
Cow position:
               
chr25:5271232-5271435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-546
               

               
Cow position:
               
chr25:4860802-4860594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
340-548
               

               
Cow position:
               
chr25:5604594-5604396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
340-548
               

               
Cow position:
               
chr25:10580443-10580228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr25:6118195-6117989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr25:13720895-13720686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 161
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr25:16136801-16137009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr25:33589758-33589549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-549
               

               
Cow position:
               
chr25:38569949-38569745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr25:8572225-8572015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr25:9532295-9532506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr25:26791679-26791884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
340-550
               

               
Cow position:
               
chr25:28272960-28273170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:3167534-3167323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:5461820-5462031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:10158392-10158603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:12318194-12317983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:13067337-13067126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:17993873-17993662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:21121230-21121441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-551
               

               
Cow position:
               
chr25:29383682-29383471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-556
               

               
Cow position:
               
chr25:4857847-4857631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr25:36871504-36871723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-561
               

               
Cow position:
               
chr25:21562303-21562073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
340-562
               

               
Cow position:
               
chr25:23013858-23014086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
340-563
               

               
Cow position:
               
chr25:26225392-26225177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
340-564
               

               
Cow position:
               
chr25:17585288-17585064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:4049680-4049897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:13553558-13553777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:14960055-14959831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
215, 98
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:22730295-22730501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:34156319-34156544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
177, 116
               

               
Conread position:
               
340-565
               

               
Cow position:
               
chr25:36119847-36120068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
340-566
               

               
Cow position:
               
chr25:29336136-29336362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:2511063-2510835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:4161365-4161593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
213, 113
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:7069171-7069399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:7608963-7609191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:7717590-7717816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:10896082-10895854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:12176553-12176325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:12753266-12753044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:14555318-14555546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:14823100-14822878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:15412671-15412899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:17037101-17037329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:17119540-17119320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:17426903-17427131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:17808132-17807904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:17994647-17994420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
129, 144
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:18044855-18044627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:18090567-18090795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:19138922-19138694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:19531030-19531258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:19586689-19586461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:19912896-19912669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:21209301-21209075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:22198232-22198460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:23334657-23334885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:26319391-26319619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:26756118-26756346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:26940017-26940245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:27143287-27143058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:27231984-27232209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:30816471-30816700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:32514197-32513969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:32609769-32609541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:33990019-33989791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:34121443-34121215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:35589720-35589948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:35602077-35602305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:35649483-35649711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:36351389-36351617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
180, 135
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr25:36633337-36633113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
340-571
               

               
Cow position:
               
chr25:24663350-24663122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
340-571
               

               
Cow position:
               
chr25:32116951-32116722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
340-578
               

               
Cow position:
               
chr25:10367041-10366803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
205, 118
               

               
Conread position:
               
340-586
               

               
Cow position:
               
chr25:37469423-37469672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
340-606
               

               
Cow position:
               
chr25:27424096-27423833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
205, 76
               

               
Conread position:
               
340-610
               

               
Cow position:
               
chr25:2110729-2110999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 49
               

               
Conread position:
               
340-610
               

               
Cow position:
               
chr25:18490720-18490997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
188, 56
               

               
Conread position:
               
340-618
               

               
Cow position:
               
chr25:13429480-13429206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
340-626
               

               
Cow position:
               
chr25:18885835-18885544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 151
               

               
Conread position:
               
340-630
               

               
Cow position:
               
chr25:6021615-6021913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
208, 113
               

               
Conread position:
               
340-630
               

               
Cow position:
               
chr25:18448483-18448782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
340-637
               

               
Cow position:
               
chr25:6740465-6740765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
212, 118
               

               
Conread position:
               
340-650
               

               
Cow position:
               
chr25:12204114-12204432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
340-650
               

               
Cow position:
               
chr25:24727140-24726819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
225, 30
               

               
Conread position:
               
340-654
               

               
Cow position:
               
chr25:12359851-12360177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
340-654
               

               
Cow position:
               
chr25:20060383-20060062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 80
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr25:11044288-11044594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr25:23601293-23600966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr25:27076708-27077035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr25:27146082-27146414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
340-655
               

               
Cow position:
               
chr25:29525217-29524890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-659
               

               
Cow position:
               
chr25:38910181-38910512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-660
               

               
Cow position:
               
chr25:26111927-26112240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
231, 101
               

               
Conread position:
               
340-662
               

               
Cow position:
               
chr25:31733087-31732757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 45
               

               
Conread position:
               
340-663
               

               
Cow position:
               
chr25:13967019-13966684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
213, 0
               

               
Conread position:
               
340-665
               

               
Cow position:
               
chr25:395002-395331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
340-666
               

               
Cow position:
               
chr25:24136798-24136461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
340-668
               

               
Cow position:
               
chr25:41366514-41366189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
208, 71
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr25:5537003-5536665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr25:12943380-12943042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
213, 310
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr25:14954380-14954042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
207, 157
               

               
Conread position:
               
340-670
               

               
Cow position:
               
chr25:35567241-35566901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
129, 152
               

               
Conread position:
               
340-671
               

               
Cow position:
               
chr25:35608081-35607738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
340-672
               

               
Cow position:
               
chr25:16560945-16560612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
217, 118
               

               
Conread position:
               
340-677
               

               
Cow position:
               
chr25:34659459-34659112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 155
               

               
Conread position:
               
340-677
               

               
Cow position:
               
chr25:36765650-36765307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
198, 127
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr25:6606713-6606367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 177
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr25:17659202-17659553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
133, 316
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr25:19924169-19924512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr25:20771688-20771342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
340-678
               

               
Cow position:
               
chr25:38439806-38440153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
340-679
               

               
Cow position:
               
chr25:6891882-6891529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 260
               

               
Conread position:
               
340-685
               

               
Cow position:
               
chr25:12824384-12824023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 207
               

               
Conread position:
               
340-688
               

               
Cow position:
               
chr25:36124345-36124682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
287, 40
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr25:3689060-3689417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr25:8235595-8235238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr25:12157528-12157885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
131, 127
               

               
Conread position:
               
340-689
               

               
Cow position:
               
chr25:15618346-15618703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
230, 311
               

               
Conread position:
               
340-702
               

               
Cow position:
               
chr25:23389627-23389267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 72
               

               
Conread position:
               
340-705
               

               
Cow position:
               
chr25:16738296-16737923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
181, 70
               

               
Conread position:
               
340-714
               

               
Cow position:
               
chr25:9641989-9642381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
340-717
               

               
Cow position:
               
chr25:23410310-23410694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
340-717
               

               
Cow position:
               
chr25:26407845-26408226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
211, 80
               

               
Conread position:
               
340-719
               

               
Cow position:
               
chr25:7800781-7801169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 269
               

               
Conread position:
               
340-719
               

               
Cow position:
               
chr25:35339980-35340359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 80
               

               
Conread position:
               
340-723
               

               
Cow position:
               
chr25:34502036-34501650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 306
               

               
Conread position:
               
340-725
               

               
Cow position:
               
chr25:3140951-3141344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
213, 311
               

               
Conread position:
               
340-726
               

               
Cow position:
               
chr25:12239491-12239112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
340-735
               

               
Cow position:
               
chr25:11666312-11666692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
234, 79
               

               
Conread position:
               
340-741
               

               
Cow position:
               
chr25:12750518-12750108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 307
               

               
Conread position:
               
340-743
               

               
Cow position:
               
chr25:1735665-1735269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 90
               

               
Conread position:
               
340-750
               

               
Cow position:
               
chr25:35554319-35554745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 320
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr25:11269553-11269139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
215, 306
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr25:13955739-13955320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 311
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr25:19339458-19339876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
192, 310
               

               
Conread position:
               
340-751
               

               
Cow position:
               
chr25:34163911-34163498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
213, 73
               

               
Conread position:
               
340-752
               

               
Cow position:
               
chr25:8231237-8230821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
187, 306
               

               
Conread position:
               
340-752
               

               
Cow position:
               
chr25:17682130-17681716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
340-754
               

               
Cow position:
               
chr25:21950771-21951193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 197
               

               
Conread position:
               
340-754
               

               
Cow position:
               
chr25:34343253-34342833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
211, 299
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:380336-379914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
230, 199
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:5539067-5539486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 307
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:8655940-8656361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
212, 288
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:10698799-10699217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
215, 328
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:12171110-12171522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
187, 80
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:12208136-12208559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:13787596-13788018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:13960712-13961130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:14274086-14274493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 118
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:20650912-20651340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:22412834-22412414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 308
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:25510540-25510960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:25754350-25753932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 92
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:26282675-26283086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
211, 92
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:26682210-26682634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
129, 188
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:26849403-26848978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
186, 284
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:26923494-26923915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
210, 310
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:27017347-27016924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
221, 310
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:28274798-28274385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
180, 123
               

               
Conread position:
               
340-755
               

               
Cow position:
               
chr25:28863520-28863943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
221, 311
               

               
Conread position:
               
340-759
               

               
Cow position:
               
chr25:9349612-9349215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
340-764
               

               
Cow position:
               
chr25:17598846-17598420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
340-771
               

               
Cow position:
               
chr25:41356152-41355714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 311
               

               
Conread position:
               
340-772
               

               
Cow position:
               
chr25:2046906-2046478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
340-772
               

               
Cow position:
               
chr25:21024557-21024122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
340-775
               

               
Cow position:
               
chr25:9414773-9415217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
213, 326
               

               
Conread position:
               
340-787
               

               
Cow position:
               
chr25:5756336-5756780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 229
               

               
Conread position:
               
340-794
               

               
Cow position:
               
chr25:4548077-4547615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
340-804
               

               
Cow position:
               
chr25:40957341-40956876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 117
               

               
Conread position:
               
340-807
               

               
Cow position:
               
chr25:18564138-18564602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 199
               

               
Conread position:
               
340-807
               

               
Cow position:
               
chr25:32191314-32191770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 142
               

               
Conread position:
               
340-808
               

               
Cow position:
               
chr25:4680885-4681343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
340-816
               

               
Cow position:
               
chr25:13325247-13325703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
340-816
               

               
Cow position:
               
chr25:26654553-26655030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
340-818
               

               
Cow position:
               
chr25:13569522-13569051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 164
               

               
Conread position:
               
340-820
               

               
Cow position:
               
chr25:25873342-25872862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
213, 328
               

               
Conread position:
               
340-825
               

               
Cow position:
               
chr25:11830249-11829796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 35
               

               
Conread position:
               
340-825
               

               
Cow position:
               
chr25:26238514-26238995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 301
               

               
Conread position:
               
340-825
               

               
Cow position:
               
chr25:41107406-41107893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 56
               

               
Conread position:
               
340-862
               

               
Cow position:
               
chr25:16064543-16065050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
340-866
               

               
Cow position:
               
chr25:787918-788429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 19
               

               
Conread position:
               
340-874
               

               
Cow position:
               
chr25:16866883-16867425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 37
               

               
Conread position:
               
340-874
               

               
Cow position:
               
chr25:37638008-37637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
299, 15
               

               
Conread position:
               
340-874
               

               
Cow position:
               
chr25:41387864-41387345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
192, 80
               

               
Conread position:
               
340-879
               

               
Cow position:
               
chr25:20403074-20402524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 123
               

               
Conread position:
               
340-882
               

               
Cow position:
               
chr25:20007766-20008322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 238
               

               
Conread position:
               
340-886
               

               
Cow position:
               
chr25:5847150-5846613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 73
               

               
Conread position:
               
340-886
               

               
Cow position:
               
chr25:6683415-6682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 40
               

               
Conread position:
               
340-886
               

               
Cow position:
               
chr25:13446275-13445724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 136
               

               
Conread position:
               
340-889
               

               
Cow position:
               
chr25:17658260-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 118
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:4522172-4521644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 116
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:11437157-11436627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 256
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:14791401-14791951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 80
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:21193298-21192744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 123
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:27868456-27869008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 49
               

               
Conread position:
               
340-891
               

               
Cow position:
               
chr25:30279563-30279000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 266
               

               
Conread position:
               
340-892
               

               
Cow position:
               
chr25:36746801-36746248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr25:2414482-2414998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 80
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr25:11585158-11585731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
340-896
               

               
Cow position:
               
chr25:14834023-14833466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
340-899
               

               
Cow position:
               
chr25:16922147-16921588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 108
               

               
Conread position:
               
340-899
               

               
Cow position:
               
chr25:18721452-18720922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
340-899
               

               
Cow position:
               
chr25:29559665-29560223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
507, 163
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:8120422-8120987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 118
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:21191135-21191683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 80
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:30319804-30319242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 336
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:33959614-33959042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 49
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:36392318-36391732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
211, 30
               

               
Conread position:
               
340-900
               

               
Cow position:
               
chr25:41097548-41096957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 297
               

               
Conread position:
               
341-449
               

               
Cow position:
               
chr25:40906630-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-461
               

               
Cow position:
               
chr25:14284122-14284002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-485
               

               
Cow position:
               
chr25:32823984-32823841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
341-540
               

               
Cow position:
               
chr25:32848677-32848480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
341-547
               

               
Cow position:
               
chr25:2453947-2453740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 78
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr25:10013739-10013531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr25:18240799-18241007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr25:18323707-18323499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
137, 122
               

               
Conread position:
               
341-549
               

               
Cow position:
               
chr25:26881862-26882071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
341-556
               

               
Cow position:
               
chr25:26896686-26896899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
341-565
               

               
Cow position:
               
chr25:17659876-17660100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
341-565
               

               
Cow position:
               
chr25:35617784-35618004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
341-568
               

               
Cow position:
               
chr25:36127253-36127026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-655
               

               
Cow position:
               
chr25:34257634-34257960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
341-660
               

               
Cow position:
               
chr25:20394853-20395164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 105
               

               
Conread position:
               
341-669
               

               
Cow position:
               
chr25:1096223-1096549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 189
               

               
Conread position:
               
341-678
               

               
Cow position:
               
chr25:4897743-4898085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
122, 306
               

               
Conread position:
               
341-678
               

               
Cow position:
               
chr25:11056525-11056857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
341-705
               

               
Cow position:
               
chr25:11054576-11054918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
341-720
               

               
Cow position:
               
chr25:11097354-11097741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
212, 310
               

               
Conread position:
               
341-723
               

               
Cow position:
               
chr25:25827107-25827503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 120
               

               
Conread position:
               
341-755
               

               
Cow position:
               
chr25:23351042-23351461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 166
               

               
Conread position:
               
341-755
               

               
Cow position:
               
chr25:34013108-34012688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
225, 290
               

               
Conread position:
               
341-813
               

               
Cow position:
               
chr25:11662169-11661696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 82
               

               
Conread position:
               
341-891
               

               
Cow position:
               
chr25:18294669-18294114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 191
               

               
Conread position:
               
341-900
               

               
Cow position:
               
chr25:7216468-7217022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 205
               

               
Conread position:
               
342-550
               

               
Cow position:
               
chr25:5611460-5611671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
342-565
               

               
Cow position:
               
chr25:6421404-6421190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
342-604
               

               
Cow position:
               
chr25:8397418-8397672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr25:40657946-40658245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
342-659
               

               
Cow position:
               
chr25:23739604-23739296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
342-689
               

               
Cow position:
               
chr25:25479985-25479646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
92, 137
               

               
Conread position:
               
342-720
               

               
Cow position:
               
chr25:9396102-9396475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
192, 104
               

               
Conread position:
               
342-878
               

               
Cow position:
               
chr25:23829462-23828946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 42
               

               
Conread position:
               
342-890
               

               
Cow position:
               
chr25:35347550-35348102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
342-891
               

               
Cow position:
               
chr25:11956474-11957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
342-896
               

               
Cow position:
               
chr25:2136011-2136556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 44
               

               
Conread position:
               
342-898
               

               
Cow position:
               
chr25:10657390-10656833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 198
               

               
Conread position:
               
342-900
               

               
Cow position:
               
chr25:10407771-10407205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 285
               

               
Conread position:
               
342-900
               

               
Cow position:
               
chr25:37448086-37448633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
193, 61
               

               
Conread position:
               
343-755
               

               
Cow position:
               
chr25:35446594-35447001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
200, 97
               

               
Conread position:
               
344-508
               

               
Cow position:
               
chr25:598981-599148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
345-565
               

               
Cow position:
               
chr25:33687248-33687026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
345-900
               

               
Cow position:
               
chr25:26523627-26524168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
346-452
               

               
Cow position:
               
chr25:16044933-16044827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-501
               

               
Cow position:
               
chr25:12807853-12807697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
346-528
               

               
Cow position:
               
chr25:31064822-31064994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr25:35655214-35655431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
347-610
               

               
Cow position:
               
chr25:6000210-5999948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
347-648
               

               
Cow position:
               
chr25:14225144-14224843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 117
               

               
Conread position:
               
347-719
               

               
Cow position:
               
chr25:20496192-20496560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
347-793
               

               
Cow position:
               
chr25:9055857-9056280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
198, 88
               

               
Conread position:
               
347-793
               

               
Cow position:
               
chr25:10748848-10748399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
213, 85
               

               
Conread position:
               
347-891
               

               
Cow position:
               
chr25:24572724-24573256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 185
               

               
Conread position:
               
347-900
               

               
Cow position:
               
chr25:22314853-22315409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 187
               

               
Conread position:
               
350-466
               

               
Cow position:
               
chr25:20652317-20652201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-550
               

               
Cow position:
               
chr25:18271916-18272117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
350-558
               

               
Cow position:
               
chr25:18082379-18082174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 91
               

               
Conread position:
               
350-564
               

               
Cow position:
               
chr25:8485877-8485667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
350-565
               

               
Cow position:
               
chr25:31586695-31586907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
350-566
               

               
Cow position:
               
chr25:29802084-29801868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-568
               

               
Cow position:
               
chr25:18236718-18236500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-656
               

               
Cow position:
               
chr25:37687502-37687209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
350-658
               

               
Cow position:
               
chr25:12235101-12234793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
350-660
               

               
Cow position:
               
chr25:13333078-13333396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
350-662
               

               
Cow position:
               
chr25:29198985-29199306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
350-727
               

               
Cow position:
               
chr25:24654514-24654122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
200, 177
               

               
Conread position:
               
350-750
               

               
Cow position:
               
chr25:18181769-18182176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
199, 125
               

               
Conread position:
               
350-812
               

               
Cow position:
               
chr25:14570021-14570491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 156
               

               
Conread position:
               
350-889
               

               
Cow position:
               
chr25:15273345-15273859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
350-890
               

               
Cow position:
               
chr25:20069379-20069909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 99
               

               
Conread position:
               
351-678
               

               
Cow position:
               
chr25:7445810-7446140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
184, 12
               

               
Conread position:
               
351-900
               

               
Cow position:
               
chr25:30852430-30852971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 107
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr25:23945857-23945591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
353-583
               

               
Cow position:
               
chr25:11970173-11969944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
353-824
               

               
Cow position:
               
chr25:21245948-21245471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 110
               

               
Conread position:
               
354-636
               

               
Cow position:
               
chr25:17354038-17354327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
354-672
               

               
Cow position:
               
chr25:10012394-10012066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
354-794
               

               
Cow position:
               
chr25:18293430-18293848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
194, 64
               

               
Conread position:
               
355-550
               

               
Cow position:
               
chr25:3969056-3969250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
355-560
               

               
Cow position:
               
chr25:33112352-33112133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
355-568
               

               
Cow position:
               
chr25:24227680-24227464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
355-754
               

               
Cow position:
               
chr25:2126129-2126524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
215, 131
               

               
Conread position:
               
356-546
               

               
Cow position:
               
chr25:12541113-12541299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
356-562
               

               
Cow position:
               
chr25:10212158-10212363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
356-716
               

               
Cow position:
               
chr25:13062518-13062886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
197, 295
               

               
Conread position:
               
356-717
               

               
Cow position:
               
chr25:20625268-20624905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 95
               

               
Conread position:
               
356-897
               

               
Cow position:
               
chr25:33664233-33663705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 19
               

               
Conread position:
               
357-551
               

               
Cow position:
               
chr25:17538750-17538557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
357-568
               

               
Cow position:
               
chr25:23738792-23738581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
359-551
               

               
Cow position:
               
chr25:10637842-10637650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
361-645
               

               
Cow position:
               
chr25:41392998-41392702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 250
               

               
Conread position:
               
361-739
               

               
Cow position:
               
chr25:9957368-9956990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
361-812
               

               
Cow position:
               
chr25:27531602-27531152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 237
               

               
Conread position:
               
362-549
               

               
Cow position:
               
chr25:19585672-19585486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
362-897
               

               
Cow position:
               
chr25:6803231-6803752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
214, 130
               

               
Conread position:
               
363-793
               

               
Cow position:
               
chr25:36037122-36036677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 277
               

               
Conread position:
               
365-771
               

               
Cow position:
               
chr25:16242301-16241881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
366-520
               

               
Cow position:
               
chr25:20133739-20133591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
367-689
               

               
Cow position:
               
chr25:15694655-15694980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr25:18073231-18073410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
374-568
               

               
Cow position:
               
chr25:17418862-17419056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
374-574
               

               
Cow position:
               
chr25:7687893-7687692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
374-663
               

               
Cow position:
               
chr25:6424902-6424611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 30
               

               
Conread position:
               
374-672
               

               
Cow position:
               
chr25:16231445-16231138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
374-772
               

               
Cow position:
               
chr25:9847465-9847870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
374-808
               

               
Cow position:
               
chr25:17975688-17975261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 247
               

               
Conread position:
               
375-900
               

               
Cow position:
               
chr25:12097523-12098044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 49
               

               
Conread position:
               
376-609
               

               
Cow position:
               
chr25:27521303-27521080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
376-720
               

               
Cow position:
               
chr25:9023326-9023662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
376-721
               

               
Cow position:
               
chr25:29352243-29351889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
102, 92
               

               
Conread position:
               
377-549
               

               
Cow position:
               
chr25:22346332-22346497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
377-562
               

               
Cow position:
               
chr25:30817255-30817439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
377-565
               

               
Cow position:
               
chr25:41044499-41044683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
377-568
               

               
Cow position:
               
chr25:7762929-7763120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-668
               

               
Cow position:
               
chr25:41364297-41364005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
377-678
               

               
Cow position:
               
chr25:9743907-9744216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
377-793
               

               
Cow position:
               
chr25:22910165-22909759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 93
               

               
Conread position:
               
377-896
               

               
Cow position:
               
chr25:27821092-27821633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 297
               

               
Conread position:
               
378-728
               

               
Cow position:
               
chr25:15391645-15391283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
379-804
               

               
Cow position:
               
chr25:25051700-25051264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 177
               

               
Conread position:
               
380-607
               

               
Cow position:
               
chr25:15368361-15368586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
380-813
               

               
Cow position:
               
chr25:13708702-13709142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
165, 136
               

               
Conread position:
               
380-891
               

               
Cow position:
               
chr25:23053242-23053760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
383-549
               

               
Cow position:
               
chr25:18968960-18969126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
383-568
               

               
Cow position:
               
chr25:21961318-21961137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
383-637
               

               
Cow position:
               
chr25:20460819-20461077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
383-762
               

               
Cow position:
               
chr25:12817061-12817436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 81
               

               
Conread position:
               
384-819
               

               
Cow position:
               
chr25:14196546-14196987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
385-677
               

               
Cow position:
               
chr25:16039149-16038847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
166, 119
               

               
Conread position:
               
386-530
               

               
Cow position:
               
chr25:22549920-22549778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
386-689
               

               
Cow position:
               
chr25:8347200-8347509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 273
               

               
Conread position:
               
386-728
               

               
Cow position:
               
chr25:29561655-29561994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
169, 232
               

               
Conread position:
               
388-755
               

               
Cow position:
               
chr25:23407151-23406774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
389-661
               

               
Cow position:
               
chr25:25961656-25961933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 243
               

               
Conread position:
               
392-655
               

               
Cow position:
               
chr25:14351995-14352270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
392-664
               

               
Cow position:
               
chr25:10366054-10365778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
392-815
               

               
Cow position:
               
chr25:8576388-8576819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
393-882
               

               
Cow position:
               
chr25:16319428-16318962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 43
               

               
Conread position:
               
394-855
               

               
Cow position:
               
chr25:15714580-15715033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
395-626
               

               
Cow position:
               
chr25:25948695-25948460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
141, 122
               

               
Conread position:
               
397-716
               

               
Cow position:
               
chr25:15319621-15319945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
399-623
               

               
Cow position:
               
chr25:448641-448409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
399-861
               

               
Cow position:
               
chr25:36761810-36762269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 224
               

               
Conread position:
               
399-897
               

               
Cow position:
               
chr25:6474396-6473871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
400-721
               

               
Cow position:
               
chr25:8133244-8133577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
401-778
               

               
Cow position:
               
chr25:14117815-14118178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
401-784
               

               
Cow position:
               
chr25:6226747-6227128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 201
               

               
Conread position:
               
411-897
               

               
Cow position:
               
chr25:22297298-22296810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
412-619
               

               
Cow position:
               
chr25:16044934-16045143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
412-882
               

               
Cow position:
               
chr25:10156306-10156741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
413-549
               

               
Cow position:
               
chr25:23920135-23919998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
413-696
               

               
Cow position:
               
chr25:10330676-10330407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
413-755
               

               
Cow position:
               
chr25:6886259-6885907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 103
               

               
Conread position:
               
413-819
               

               
Cow position:
               
chr25:21895166-21894758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
413-879
               

               
Cow position:
               
chr25:20023681-20023209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 268
               

               
Conread position:
               
413-897
               

               
Cow position:
               
chr25:20348576-20349078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 234
               

               
Conread position:
               
414-678
               

               
Cow position:
               
chr25:7386463-7386737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
6, 237
               

               
Conread position:
               
415-654
               

               
Cow position:
               
chr25:18130795-18131038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
416-820
               

               
Cow position:
               
chr25:28188228-28187816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
417-895
               

               
Cow position:
               
chr25:9990370-9989902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 186
               

               
Conread position:
               
418-564
               

               
Cow position:
               
chr25:33457430-33457575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
418-656
               

               
Cow position:
               
chr25:27504462-27504209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
419-634
               

               
Cow position:
               
chr25:12195601-12195381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 103
               

               
Conread position:
               
419-663
               

               
Cow position:
               
chr25:18206576-18206325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
419-897
               

               
Cow position:
               
chr25:12261170-12260682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
420-565
               

               
Cow position:
               
chr25:19366684-19366552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
420-650
               

               
Cow position:
               
chr25:21096795-21096559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
420-879
               

               
Cow position:
               
chr25:36081600-36082052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
421-755
               

               
Cow position:
               
chr25:5572072-5571736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
424-796
               

               
Cow position:
               
chr25:12778806-12778436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 186
               

               
Conread position:
               
424-882
               

               
Cow position:
               
chr25:14512845-14513294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
425-568
               

               
Cow position:
               
chr25:6003261-6003118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
425-617
               

               
Cow position:
               
chr25:21266736-21266939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
425-626
               

               
Cow position:
               
chr25:17702233-17702032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
425-639
               

               
Cow position:
               
chr25:17712264-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
425-769
               

               
Cow position:
               
chr25:6237853-6238205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
425-820
               

               
Cow position:
               
chr25:23917572-23917969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
425-869
               

               
Cow position:
               
chr25:22203960-22203522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 156
               

               
Conread position:
               
425-879
               

               
Cow position:
               
chr25:36535702-36535233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
425-897
               

               
Cow position:
               
chr25:26700770-26701223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
426-538
               

               
Cow position:
               
chr25:433345-433237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
426-550
               

               
Cow position:
               
chr25:13443871-13443745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
426-556
               

               
Cow position:
               
chr25:11823794-11823667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
426-566
               

               
Cow position:
               
chr25:8961194-8961330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
426-607
               

               
Cow position:
               
chr25:18452855-18453037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
426-620
               

               
Cow position:
               
chr25:24168167-24167969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
426-728
               

               
Cow position:
               
chr25:18935144-18934861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
426-753
               

               
Cow position:
               
chr25:5837235-5836895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 177
               

               
Conread position:
               
426-753
               

               
Cow position:
               
chr25:24406009-24405671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
24, 251
               

               
Conread position:
               
426-757
               

               
Cow position:
               
chr25:12081584-12081256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
426-767
               

               
Cow position:
               
chr25:11131316-11131660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
426-789
               

               
Cow position:
               
chr25:40321561-40321190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
426-828
               

               
Cow position:
               
chr25:33978470-33978085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
395, 111
               

               
Conread position:
               
426-891
               

               
Cow position:
               
chr25:38135478-38135950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
427-525
               

               
Cow position:
               
chr25:21892838-21892935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
427-868
               

               
Cow position:
               
chr25:18075401-18075840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
428-897
               

               
Cow position:
               
chr25:35612568-35612096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
429-750
               

               
Cow position:
               
chr25:33691288-33691617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
430-663
               

               
Cow position:
               
chr25:35344773-35345005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
430-705
               

               
Cow position:
               
chr25:35625436-35625170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
430-716
               

               
Cow position:
               
chr25:12898495-12898774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
430-759
               

               
Cow position:
               
chr25:18988112-18988458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
430-769
               

               
Cow position:
               
chr25:18000779-18000453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
215, 25
               

               
Conread position:
               
431-726
               

               
Cow position:
               
chr25:14266766-14266483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
432-823
               

               
Cow position:
               
chr25:12117249-12116867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 45
               

               
Conread position:
               
432-890
               

               
Cow position:
               
chr25:20785844-20785390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
432-891
               

               
Cow position:
               
chr25:7306035-7306487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 225
               

               
Conread position:
               
432-897
               

               
Cow position:
               
chr25:18487411-18487878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
433-531
               

               
Cow position:
               
chr25:36139344-36139442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-662
               

               
Cow position:
               
chr25:13642578-13642335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
433-720
               

               
Cow position:
               
chr25:35332911-35333187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
433-745
               

               
Cow position:
               
chr25:2517284-2517576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
433-897
               

               
Cow position:
               
chr25:7011211-7010766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
433-897
               

               
Cow position:
               
chr25:33550244-33550714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
434-565
               

               
Cow position:
               
chr25:12174766-12174635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
434-568
               

               
Cow position:
               
chr25:13566584-13566716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
434-660
               

               
Cow position:
               
chr25:9961439-9961197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
434-794
               

               
Cow position:
               
chr25:14809049-14809376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
434-879
               

               
Cow position:
               
chr25:17566326-17566776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 219
               

               
Conread position:
               
434-892
               

               
Cow position:
               
chr25:38957717-38958143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
434-900
               

               
Cow position:
               
chr25:19679081-19679558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 165
               

               
Conread position:
               
435-828
               

               
Cow position:
               
chr25:31230483-31230112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
436-558
               

               
Cow position:
               
chr25:19633876-19633758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
436-560
               

               
Cow position:
               
chr25:7440596-7440721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
436-663
               

               
Cow position:
               
chr25:8918537-8918302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
69, 176
               

               
Conread position:
               
436-794
               

               
Cow position:
               
chr25:5407491-5407845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
436-891
               

               
Cow position:
               
chr25:19129594-19130051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
437-652
               

               
Cow position:
               
chr25:16400507-16400298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
437-662
               

               
Cow position:
               
chr25:16001779-16001548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
437-823
               

               
Cow position:
               
chr25:7581685-7581296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
437-881
               

               
Cow position:
               
chr25:9269115-9269527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
437-897
               

               
Cow position:
               
chr25:10949810-10949362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 26
               

               
Conread position:
               
438-666
               

               
Cow position:
               
chr25:6814994-6815220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
438-819
               

               
Cow position:
               
chr25:15254588-15254222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
441-649
               

               
Cow position:
               
chr25:36026753-36026970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
441-751
               

               
Cow position:
               
chr25:2194693-2194991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
442-563
               

               
Cow position:
               
chr25:12997096-12997219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
442-565
               

               
Cow position:
               
chr25:36557438-36557556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
442-705
               

               
Cow position:
               
chr25:4002543-4002816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 225
               

               
Conread position:
               
442-726
               

               
Cow position:
               
chr25:8560616-8560904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
443-891
               

               
Cow position:
               
chr25:24669682-24669255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
444-560
               

               
Cow position:
               
chr25:17475774-17475659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
446-653
               

               
Cow position:
               
chr25:20085038-20085249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
446-660
               

               
Cow position:
               
chr25:32176470-32176257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
446-727
               

               
Cow position:
               
chr25:20211335-20211044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 190
               

               
Conread position:
               
446-758
               

               
Cow position:
               
chr25:20020236-20019936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
446-864
               

               
Cow position:
               
chr25:12294000-12293574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 210
               

               
Conread position:
               
448-812
               

               
Cow position:
               
chr25:18265917-18266284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
449-626
               

               
Cow position:
               
chr25:19576686-19576506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
449-673
               

               
Cow position:
               
chr25:24008423-24008187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 189
               

               
Conread position:
               
453-862
               

               
Cow position:
               
chr25:41132597-41132198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
453-879
               

               
Cow position:
               
chr25:22369151-22369571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
454-763
               

               
Cow position:
               
chr25:15377092-15377398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
454-897
               

               
Cow position:
               
chr25:21289099-21289553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 205
               

               
Conread position:
               
456-688
               

               
Cow position:
               
chr25:7329305-7329546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
111, 166
               

               
Conread position:
               
457-659
               

               
Cow position:
               
chr25:15286778-15286569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
457-758
               

               
Cow position:
               
chr25:38425127-38425428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
78, 206
               

               
Conread position:
               
457-891
               

               
Cow position:
               
chr25:1762869-1763281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
459-802
               

               
Cow position:
               
chr25:12840954-12840607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 226
               

               
Conread position:
               
459-822
               

               
Cow position:
               
chr25:61421-61779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 167
               

               
Conread position:
               
460-891
               

               
Cow position:
               
chr25:26338210-26338658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 209
               

               
Conread position:
               
461-650
               

               
Cow position:
               
chr25:6256172-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
463-891
               

               
Cow position:
               
chr25:29826178-29826616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 225
               

               
Conread position:
               
465-709
               

               
Cow position:
               
chr25:36033206-36033456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
98, 207
               

               
Conread position:
               
465-860
               

               
Cow position:
               
chr25:6961380-6960982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
470-882
               

               
Cow position:
               
chr25:40905057-40904639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 182
               

               
Conread position:
               
471-568
               

               
Cow position:
               
chr25:35902015-35902111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr25:34169730-34170073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
471-821
               

               
Cow position:
               
chr25:10218275-10217921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 185
               

               
Conread position:
               
472-897
               

               
Cow position:
               
chr25:19478465-19478893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 97
               

               
Conread position:
               
472-900
               

               
Cow position:
               
chr25:7007693-7008124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
476-686
               

               
Cow position:
               
chr25:12899536-12899754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
476-768
               

               
Cow position:
               
chr25:14255700-14255984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
478-900
               

               
Cow position:
               
chr25:26090029-26089620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
479-875
               

               
Cow position:
               
chr25:2624588-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
480-824
               

               
Cow position:
               
chr25:12319553-12319222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
481-802
               

               
Cow position:
               
chr25:34768934-34768623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
481-891
               

               
Cow position:
               
chr25:14720539-14720929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
483-882
               

               
Cow position:
               
chr25:35826488-35826074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
487-716
               

               
Cow position:
               
chr25:26270142-26269912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
489-770
               

               
Cow position:
               
chr25:16714480-16714191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
489-824
               

               
Cow position:
               
chr25:36017334-36017666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
489-891
               

               
Cow position:
               
chr25:22178715-22179107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
489-899
               

               
Cow position:
               
chr25:13272363-13272774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 184
               

               
Conread position:
               
490-895
               

               
Cow position:
               
chr25:8157715-8157314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
77, 235
               

               
Conread position:
               
491-808
               

               
Cow position:
               
chr25:20133520-20133200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
491-897
               

               
Cow position:
               
chr25:17704545-17704943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
492-688
               

               
Cow position:
               
chr25:21047123-21047318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
493-896
               

               
Cow position:
               
chr25:7750248-7750648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
500-846
               

               
Cow position:
               
chr25:25861555-25861192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 236
               

               
Conread position:
               
500-896
               

               
Cow position:
               
chr25:15410106-15409720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
500-900
               

               
Cow position:
               
chr25:12755686-12755282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
502-662
               

               
Cow position:
               
chr25:3982851-3983018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
503-897
               

               
Cow position:
               
chr25:26133846-26134250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
504-824
               

               
Cow position:
               
chr25:17144241-17144569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
506-823
               

               
Cow position:
               
chr25:18905692-18906015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
513-875
               

               
Cow position:
               
chr25:17190926-17190573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
514-876
               

               
Cow position:
               
chr25:23779495-23779151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
521-897
               

               
Cow position:
               
chr25:20047328-20047714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 229
               

               
Conread position:
               
522-900
               

               
Cow position:
               
chr25:11315733-11316109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
525-880
               

               
Cow position:
               
chr25:36835584-36835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
528-898
               

               
Cow position:
               
chr25:18202078-18201724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
531-879
               

               
Cow position:
               
chr25:13443566-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
205, 42
               

               
Conread position:
               
531-891
               

               
Cow position:
               
chr25:9002513-9002866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
533-891
               

               
Cow position:
               
chr25:34979021-34978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
534-900
               

               
Cow position:
               
chr25:21893173-21893539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
537-891
               

               
Cow position:
               
chr25:12510162-12509824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
540-882
               

               
Cow position:
               
chr25:7380999-7380650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
545-899
               

               
Cow position:
               
chr25:33557131-33557471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
550-880
               

               
Cow position:
               
chr25:11433090-11432766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
551-889
               

               
Cow position:
               
chr25:6928646-6928321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
556-897
               

               
Cow position:
               
chr25:22730703-22731026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
563-820
               

               
Cow position:
               
chr25:5474348-5474103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
564-900
               

               
Cow position:
               
chr25:26136947-26136614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
565-750
               

               
Cow position:
               
chr25:7449685-7449859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
565-759
               

               
Cow position:
               
chr25:24051840-24052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
565-801
               

               
Cow position:
               
chr25:8961651-8961880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
565-807
               

               
Cow position:
               
chr25:14157499-14157740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
565-882
               

               
Cow position:
               
chr25:11051407-11051710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
565-883
               

               
Cow position:
               
chr25:24651574-24651268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
6, 88
               

               
Conread position:
               
565-891
               

               
Cow position:
               
chr25:4245567-4245862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
565-891
               

               
Cow position:
               
chr25:21668123-21668445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 101
               

               
Conread position:
               
565-895
               

               
Cow position:
               
chr25:33686802-33686482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
194, 8
               

               
Conread position:
               
565-896
               

               
Cow position:
               
chr25:12609222-12609545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
565-896
               

               
Cow position:
               
chr25:26679105-26679428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
565-896
               

               
Cow position:
               
chr25:36020282-36020613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
565-897
               

               
Cow position:
               
chr25:448290-447959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
565-897
               

               
Cow position:
               
chr25:4488797-4489105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
565-900
               

               
Cow position:
               
chr25:22346650-22346990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
565-900
               

               
Cow position:
               
chr25:33457607-33457935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
567-751
               

               
Cow position:
               
chr25:26642462-26642647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
567-891
               

               
Cow position:
               
chr25:6292446-6292766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
568-767
               

               
Cow position:
               
chr25:11066265-11066067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
568-877
               

               
Cow position:
               
chr25:36872242-36872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 76
               

               
Conread position:
               
568-882
               

               
Cow position:
               
chr25:19364179-19363872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
568-896
               

               
Cow position:
               
chr25:9843056-9843382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 57
               

               
Conread position:
               
568-898
               

               
Cow position:
               
chr25:41151080-41150760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
213, 45
               

               
Conread position:
               
569-896
               

               
Cow position:
               
chr25:17119626-17119946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
575-897
               

               
Cow position:
               
chr25:22317568-22317888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
182, 67
               

               
Conread position:
               
578-824
               

               
Cow position:
               
chr25:22751119-22750873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
578-855
               

               
Cow position:
               
chr25:15634583-15634305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
578-883
               

               
Cow position:
               
chr25:5920831-5921135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
578-886
               

               
Cow position:
               
chr25:7673178-7673499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
578-891
               

               
Cow position:
               
chr25:1824205-1823894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
224, 43
               

               
Conread position:
               
578-891
               

               
Cow position:
               
chr25:6996675-6996982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
578-894
               

               
Cow position:
               
chr25:30618954-30619269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
202, 74
               

               
Conread position:
               
578-897
               

               
Cow position:
               
chr25:7035445-7035764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
578-897
               

               
Cow position:
               
chr25:7816874-7817189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
578-897
               

               
Cow position:
               
chr25:8485602-8485279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
578-898
               

               
Cow position:
               
chr25:30816776-30817097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
247, 220
               

               
Conread position:
               
578-899
               

               
Cow position:
               
chr25:20664403-20664073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 212
               

               
Conread position:
               
580-812
               

               
Cow position:
               
chr25:22341418-22341647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
580-878
               

               
Cow position:
               
chr25:25716544-25716829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
582-897
               

               
Cow position:
               
chr25:9315915-9316228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
232, 16
               

               
Conread position:
               
584-899
               

               
Cow position:
               
chr25:24207524-24207205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
590-825
               

               
Cow position:
               
chr25:34242195-34241969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
170, 51
               

               
Conread position:
               
590-877
               

               
Cow position:
               
chr25:23245100-23244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
594-812
               

               
Cow position:
               
chr25:4947869-4948081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
601-824
               

               
Cow position:
               
chr25:26051814-26052036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
601-875
               

               
Cow position:
               
chr25:7799466-7799732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
204, 48
               

               
Conread position:
               
602-824
               

               
Cow position:
               
chr25:23745171-23745392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
602-895
               

               
Cow position:
               
chr25:12806958-12807243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
602-896
               

               
Cow position:
               
chr25:13621445-13621161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
603-891
               

               
Cow position:
               
chr25:37332130-37331848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
604-891
               

               
Cow position:
               
chr25:35052705-35052421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
605-794
               

               
Cow position:
               
chr25:23817923-23817737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
605-900
               

               
Cow position:
               
chr25:433132-432842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
607-824
               

               
Cow position:
               
chr25:40931194-40931404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
611-808
               

               
Cow position:
               
chr25:6134170-6133976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
612-817
               

               
Cow position:
               
chr25:36021247-36021449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
612-825
               

               
Cow position:
               
chr25:23504971-23505184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
613-886
               

               
Cow position:
               
chr25:8346077-8345809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
615-896
               

               
Cow position:
               
chr25:20487514-20487233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
615-897
               

               
Cow position:
               
chr25:21183809-21184090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
615-897
               

               
Cow position:
               
chr25:33555535-33555811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
616-802
               

               
Cow position:
               
chr25:7379222-7379036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
618-881
               

               
Cow position:
               
chr25:26306276-26306016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 36
               

               
Conread position:
               
620-886
               

               
Cow position:
               
chr25:17403416-17403668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
622-882
               

               
Cow position:
               
chr25:1840255-1840509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
626-896
               

               
Cow position:
               
chr25:7551423-7551167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
628-897
               

               
Cow position:
               
chr25:40682678-40682940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
630-794
               

               
Cow position:
               
chr25:36019726-36019566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
631-890
               

               
Cow position:
               
chr25:21501109-21500846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
635-896
               

               
Cow position:
               
chr25:35762537-35762790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
635-897
               

               
Cow position:
               
chr25:33773835-33773566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
639-882
               

               
Cow position:
               
chr25:22298585-22298820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
644-891
               

               
Cow position:
               
chr25:18810297-18810528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
646-896
               

               
Cow position:
               
chr25:22348508-22348257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
157, 240
               

               
Conread position:
               
648-900
               

               
Cow position:
               
chr25:28597655-28597399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
649-825
               

               
Cow position:
               
chr25:15463545-15463719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
649-880
               

               
Cow position:
               
chr25:26072597-26072377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
650-896
               

               
Cow position:
               
chr25:18760750-18760509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
651-900
               

               
Cow position:
               
chr25:4157277-4157040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
232, 39
               

               
Conread position:
               
654-874
               

               
Cow position:
               
chr25:9107561-9107353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
654-880
               

               
Cow position:
               
chr25:18288806-18288584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
655-882
               

               
Cow position:
               
chr25:13826401-13826619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
655-900
               

               
Cow position:
               
chr25:9025090-9025328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
655-900
               

               
Cow position:
               
chr25:35109305-35109072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
656-882
               

               
Cow position:
               
chr25:13222865-13223085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
659-882
               

               
Cow position:
               
chr25:9615805-9616026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
659-900
               

               
Cow position:
               
chr25:7726629-7726872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 115
               

               
Conread position:
               
660-897
               

               
Cow position:
               
chr25:17918943-17919183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 113
               

               
Conread position:
               
663-900
               

               
Cow position:
               
chr25:9769388-9769624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
665-882
               

               
Cow position:
               
chr25:35339216-35339002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
665-889
               

               
Cow position:
               
chr25:28668076-28667855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
665-891
               

               
Cow position:
               
chr25:13823745-13823522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
665-900
               

               
Cow position:
               
chr25:5637411-5637182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
225, 133
               

               
Conread position:
               
667-879
               

               
Cow position:
               
chr25:36873357-36873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
672-897
               

               
Cow position:
               
chr25:23520047-23519834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
674-890
               

               
Cow position:
               
chr25:14225345-14225563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
674-896
               

               
Cow position:
               
chr25:3744762-3744533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 217
               

               
Conread position:
               
680-886
               

               
Cow position:
               
chr25:31514170-31514376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
680-891
               

               
Cow position:
               
chr25:9574141-9573938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
680-897
               

               
Cow position:
               
chr25:20202902-20203111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
680-897
               

               
Cow position:
               
chr25:36873067-36872851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
197, 118
               

               
Conread position:
               
680-900
               

               
Cow position:
               
chr25:5807933-5808155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
692-900
               

               
Cow position:
               
chr25:8347653-8347858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
695-891
               

               
Cow position:
               
chr25:35902751-35902943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
695-897
               

               
Cow position:
               
chr25:11060136-11060337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 97
               

               
Conread position:
               
698-877
               

               
Cow position:
               
chr25:23323497-23323680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
698-891
               

               
Cow position:
               
chr25:14164206-14164395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
698-897
               

               
Cow position:
               
chr25:36369826-36370025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
698-897
               

               
Cow position:
               
chr25:36375517-36375716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
698-898
               

               
Cow position:
               
chr25:17724217-17724016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
698-899
               

               
Cow position:
               
chr25:17137879-17138081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
698-899
               

               
Cow position:
               
chr25:18491045-18491242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
700-897
               

               
Cow position:
               
chr25:2662408-2662598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 22
               

               
Conread position:
               
700-900
               

               
Cow position:
               
chr25:15349896-15349704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
701-891
               

               
Cow position:
               
chr25:22734018-22734203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
702-896
               

               
Cow position:
               
chr25:24115305-24115114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
703-882
               

               
Cow position:
               
chr25:11857975-11857798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
706-896
               

               
Cow position:
               
chr25:1802626-1802813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
707-898
               

               
Cow position:
               
chr25:31926361-31926180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
708-900
               

               
Cow position:
               
chr25:15573405-15573597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 92
               

               
Conread position:
               
711-891
               

               
Cow position:
               
chr25:31657257-31657084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
712-893
               

               
Cow position:
               
chr25:7684877-7684697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
714-874
               

               
Cow position:
               
chr25:14849630-14849470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
714-882
               

               
Cow position:
               
chr25:18934612-18934448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
718-887
               

               
Cow position:
               
chr25:10856687-10856523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
719-898
               

               
Cow position:
               
chr25:21082378-21082202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
729-891
               

               
Cow position:
               
chr25:15999514-15999353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
729-900
               

               
Cow position:
               
chr25:15305716-15305886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
736-900
               

               
Cow position:
               
chr25:7185231-7185067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
737-882
               

               
Cow position:
               
chr25:17141148-17141291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
741-899
               

               
Cow position:
               
chr25:18131328-18131166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
742-900
               

               
Cow position:
               
chr25:28940090-28939933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
747-890
               

               
Cow position:
               
chr25:13470658-13470515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.