Cow genome map

Conread name: Ss1.1-Spl1-SPL010027A09.5

Conread position: 1-146
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 123

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 155
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 117

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 119

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 29

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 2-188
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 120

Conread position: 2-199
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 62

Conread position: 3-136
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 114

Conread position: 3-140
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 120

Conread position: 3-141
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 77

Conread position: 3-162
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 120

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 115

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 120

Conread position: 3-179
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-181
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 3-182
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 120

Conread position: 3-182
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 63

Conread position: 3-183
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 3-186
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 120

Conread position: 3-187
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 118

Conread position: 3-191
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 3-192
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 119

Conread position: 3-193
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 121

Conread position: 3-193
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 3-195
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 121

Conread position: 3-198
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 99

Conread position: 3-198
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 119

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 132

Conread position: 3-199
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 3-199
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 120

Conread position: 3-199
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 172, 28

Conread position: 3-200
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 3-200
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 125

Conread position: 3-200
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 118

Conread position: 3-200
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 109

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-202
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 74

Conread position: 3-203
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 25

Conread position: 3-203
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 122

Conread position: 3-203
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 119

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 32, 72

Conread position: 3-204
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 17

Conread position: 3-206
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 30

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 120

Conread position: 3-214
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 3-214
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 75

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 24

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 121

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 119

Conread position: 3-216
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 84

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 191, 28

Conread position: 4-202
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 120

Conread position: 4-209
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 14

Conread position: 4-211
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 86

Conread position: 4-214
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 5-200
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 119

Conread position: 5-208
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 98

Conread position: 5-211
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 113

Conread position: 5-214
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 118

Conread position: 7-214
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 21

Conread position: 8-160
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 8-164
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 117

Conread position: 8-198
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 115

Conread position: 8-199
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 77

Conread position: 8-209
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 26, 82

Conread position: 8-209
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 103

Conread position: 8-211
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 98

Conread position: 8-215
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 102

Conread position: 8-216
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 198, 49

Conread position: 13-162
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 105

Conread position: 13-199
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 15-188
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 106

Conread position: 17-199
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 103

Conread position: 20-174
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 19

Conread position: 21-186
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 21-201
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 61

Conread position: 21-202
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 96

Conread position: 21-211
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 24-214
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 98

Conread position: 28-193
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 28-201
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 28-204
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 161, 94

Conread position: 28-205
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 94

Conread position: 28-209
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 92

Conread position: 28-211
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 34

Conread position: 28-211
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 28-216
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 77, 70

Conread position: 28-216
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 93

Conread position: 29-154
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 29-185
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 29-199
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 92

Conread position: 29-215
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 92

Conread position: 30-191
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 30-201
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 30-202
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 30-208
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 26

Conread position: 30-214
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 175, 77

Conread position: 32-220
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 41-193
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 42-198
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 42-220
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 45-227
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 46-150
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 46-194
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 46-196
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 75

Conread position: 46-200
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 62

Conread position: 46-200
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 77

Conread position: 46-202
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 54

Conread position: 46-208
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 76

Conread position: 46-209
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 46-210
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 48

Conread position: 46-210
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 156, 78

Conread position: 46-211
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 151, 74

Conread position: 46-212
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 75

Conread position: 46-214
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 80

Conread position: 46-215
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 62

Conread position: 47-199
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 76

Conread position: 47-202
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 76

Conread position: 47-206
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 49-180
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 51-206
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 51-206
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 52-200
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 53-198
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 53-207
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 55-200
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 56-206
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 59-217
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 62

Conread position: 64-202
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 64-214
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 65-208
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.