Cow genome map

Conread name: Ss1.1-Spl1-SPL010027A09.5

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 122

Conread position: 1-160
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 75

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 120

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-191
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 133

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 120

Conread position: 1-193
Cow position:
Alignm length: 193
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 1-199
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 89, 37

Conread position: 1-200
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 1-201
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 1-201
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 80

Conread position: 1-204
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 122

Conread position: 1-205
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 0

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 1-215
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 120

Conread position: 3-146
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 120

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 120

Conread position: 3-154
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-155
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 120

Conread position: 3-155
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 119

Conread position: 3-161
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 120

Conread position: 3-162
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 72

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 120

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 120

Conread position: 3-169
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 120

Conread position: 3-170
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 124

Conread position: 3-171
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 115

Conread position: 3-177
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 118

Conread position: 3-177
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 120

Conread position: 3-179
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 78

Conread position: 3-179
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 118

Conread position: 3-179
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 79

Conread position: 3-179
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 25

Conread position: 3-181
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 3-183
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 3-191
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 22

Conread position: 3-193
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 127

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-200
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 3-200
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 19

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 73

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 77

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 115

Conread position: 3-200
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-201
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 67

Conread position: 3-201
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 14

Conread position: 3-201
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 124

Conread position: 3-201
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 122

Conread position: 3-201
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 41

Conread position: 3-201
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 28

Conread position: 3-202
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 127

Conread position: 3-202
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 73

Conread position: 3-202
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 120

Conread position: 3-204
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 3-204
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 120

Conread position: 3-204
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-204
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 118

Conread position: 3-206
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 119

Conread position: 3-208
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 43

Conread position: 3-209
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 11

Conread position: 3-210
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 120

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 121

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 117

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 29

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 120

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 31

Conread position: 3-211
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 29

Conread position: 3-211
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 127

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 28

Conread position: 3-211
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 81

Conread position: 3-214
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 78

Conread position: 3-214
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 3-214
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 122

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 3-216
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 16

Conread position: 4-200
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 120

Conread position: 4-208
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 89

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 120

Conread position: 5-163
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 126

Conread position: 5-199
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 85

Conread position: 5-214
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 75

Conread position: 6-211
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 118

Conread position: 8-169
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 115

Conread position: 8-203
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 61

Conread position: 8-206
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 115

Conread position: 8-209
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 102

Conread position: 8-211
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 116

Conread position: 8-211
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 9-184
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 113

Conread position: 11-211
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 21-203
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 22-202
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 24-211
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 30, 106

Conread position: 28-162
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 28-201
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 93

Conread position: 28-209
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 94

Conread position: 28-211
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 28-214
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 29-167
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 29-202
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 30-156
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 30-184
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 30-201
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 96

Conread position: 30-214
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 33-184
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 31

Conread position: 36-198
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 42-188
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 44-214
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 46-178
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 46-198
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 17

Conread position: 46-198
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 46-198
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 46-199
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 46-205
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 77

Conread position: 46-209
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 78

Conread position: 46-214
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 47-170
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 47-206
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 47-206
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 76

Conread position: 47-214
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 114, 74

Conread position: 47-215
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 76

Conread position: 49-210
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 51-209
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 70

Conread position: 53-202
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 70

Conread position: 53-211
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 55-217
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 56-211
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 66

Conread position: 64-214
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 65-202
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 55

Conread position: 66-203
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.