Cow genome map

Conread name: Ss1.1-Spl1-SPL010027A09.5

Conread position: 1-164
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 105

Conread position: 1-164
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 105

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 120

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 81

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 120

Conread position: 2-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 121

Conread position: 2-169
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 119

Conread position: 2-200
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 153, 67

Conread position: 2-201
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 3-139
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 119

Conread position: 3-154
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 55

Conread position: 3-166
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 124

Conread position: 3-182
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 3-193
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 28

Conread position: 3-198
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 120

Conread position: 3-199
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 55

Conread position: 3-200
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 3-201
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 124

Conread position: 3-201
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 120

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 3-201
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 121

Conread position: 3-201
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 122

Conread position: 3-202
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 121

Conread position: 3-202
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 3-202
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 119

Conread position: 3-203
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 13

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 60

Conread position: 3-210
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 119

Conread position: 3-211
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 120

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 105

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 3-214
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 125

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 196, 11

Conread position: 3-214
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 122

Conread position: 3-214
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 120

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 138, 48

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 43

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 121

Conread position: 3-217
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 122

Conread position: 3-222
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 122

Conread position: 4-179
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 119

Conread position: 4-200
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 120

Conread position: 4-205
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 4-209
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 27

Conread position: 5-192
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 118

Conread position: 5-201
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 116

Conread position: 5-210
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 5-211
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 124

Conread position: 5-211
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 113

Conread position: 8-129
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 8-150
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 114

Conread position: 8-154
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 114

Conread position: 8-166
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 113

Conread position: 8-183
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 8-200
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 115

Conread position: 8-201
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 8-207
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 43

Conread position: 8-211
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 114

Conread position: 8-211
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 191, 113

Conread position: 8-215
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 119

Conread position: 8-224
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 194, 22

Conread position: 9-162
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 114

Conread position: 10-154
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 113

Conread position: 10-211
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 9

Conread position: 13-215
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 14-202
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 106

Conread position: 16-199
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 107, 5

Conread position: 17-215
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 106

Conread position: 21-188
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 21-198
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 102

Conread position: 24-199
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 104

Conread position: 24-200
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 25-206
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 45

Conread position: 27-201
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 28-194
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 28-199
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 167, 27

Conread position: 28-202
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 28-207
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 94

Conread position: 28-214
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 25

Conread position: 28-214
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 29-199
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 95

Conread position: 29-201
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 39

Conread position: 30-194
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 91

Conread position: 30-201
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 106, 66

Conread position: 30-206
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 39

Conread position: 31-211
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 33-191
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 35-204
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 41-201
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 80

Conread position: 41-214
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 42-199
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 44-208
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 44-215
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 51

Conread position: 45-214
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 77

Conread position: 46-210
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 37

Conread position: 46-215
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 155, 73

Conread position: 46-218
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 110, 75

Conread position: 47-198
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 75

Conread position: 47-206
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 47-207
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 138, 75

Conread position: 47-211
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 47-215
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 55

Conread position: 48-205
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 48-214
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 73

Conread position: 51-213
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 17

Conread position: 53-196
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 68

Conread position: 91-202
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.