Cow genome map
| Conread name: | Ss1.1-Spl1-SPL010027A09.5 |
| Conread position: | 1-174 |
| Cow position: | chr28:14242868-14242695 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 1-177 |
| Cow position: | chr28:12974056-12973880 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 1-182 |
| Cow position: | chr28:6358238-6358420 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 122 |
| Conread position: | 1-182 |
| Cow position: | chr28:26826394-26826217 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 122 |
| Conread position: | 1-184 |
| Cow position: | chr28:5188258-5188437 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-199 |
| Cow position: | chr28:4937067-4937265 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 120 |
| Conread position: | 1-200 |
| Cow position: | chr28:4282317-4282514 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 1-202 |
| Cow position: | chr28:5630271-5630072 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 1-202 |
| Cow position: | chr28:7697807-7698004 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 1-203 |
| Cow position: | chr28:4186075-4185880 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-203 |
| Cow position: | chr28:7008809-7009005 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 45 |
| Conread position: | 1-210 |
| Cow position: | chr28:34230403-34230193 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 1-211 |
| Cow position: | chr28:5436914-5437120 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 57, 100 |
| Conread position: | 1-211 |
| Cow position: | chr28:12933561-12933770 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 1-215 |
| Cow position: | chr28:3449481-3449264 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 1-215 |
| Cow position: | chr28:19564063-19564268 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 199, 30 |
| Conread position: | 2-188 |
| Cow position: | chr28:6563723-6563910 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 32, 119 |
| Conread position: | 3-136 |
| Cow position: | chr28:6301254-6301121 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 3-137 |
| Cow position: | chr28:16200570-16200704 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 3-140 |
| Cow position: | chr28:11562073-11562210 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 3-160 |
| Cow position: | chr28:7644914-7644756 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 3-161 |
| Cow position: | chr28:11827858-11827703 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 3-164 |
| Cow position: | chr28:20968406-20968568 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 3-164 |
| Cow position: | chr28:32014955-32014796 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-170 |
| Cow position: | chr28:4022846-4022679 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-170 |
| Cow position: | chr28:5552537-5552708 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 126 |
| Conread position: | 3-171 |
| Cow position: | chr28:117588-117758 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 3-177 |
| Cow position: | chr28:18608195-18608369 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-178 |
| Cow position: | chr28:4163410-4163581 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 3-180 |
| Cow position: | chr28:5674042-5673871 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 3-185 |
| Cow position: | chr28:18797480-18797311 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-186 |
| Cow position: | chr28:19038848-19039029 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-188 |
| Cow position: | chr28:15362748-15362567 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 3-191 |
| Cow position: | chr28:13048111-13048298 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 3-194 |
| Cow position: | chr28:5232108-5231920 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 3-194 |
| Cow position: | chr28:12951586-12951405 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-194 |
| Cow position: | chr28:19128002-19128187 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 3-195 |
| Cow position: | chr28:10053159-10053348 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 149, 31 |
| Conread position: | 3-196 |
| Cow position: | chr28:8347904-8347711 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 3-197 |
| Cow position: | chr28:19262414-19262606 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-199 |
| Cow position: | chr28:3011097-3011292 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 3-199 |
| Cow position: | chr28:4013253-4013061 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 3-200 |
| Cow position: | chr28:10495128-10495322 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 3-200 |
| Cow position: | chr28:10845272-10845082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 3-200 |
| Cow position: | chr28:22133078-22132887 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 3-200 |
| Cow position: | chr28:30293415-30293612 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 149 |
| Conread position: | 3-201 |
| Cow position: | chr28:3484756-3484557 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 3-201 |
| Cow position: | chr28:5236044-5235855 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 185, 53 |
| Conread position: | 3-201 |
| Cow position: | chr28:7350823-7350629 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 3-202 |
| Cow position: | chr28:11398624-11398823 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 3-202 |
| Cow position: | chr28:11559463-11559658 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-202 |
| Cow position: | chr28:21008500-21008691 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-203 |
| Cow position: | chr28:4881073-4881266 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-203 |
| Cow position: | chr28:12672291-12672492 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 3-204 |
| Cow position: | chr28:21868627-21868429 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 3-205 |
| Cow position: | chr28:13356196-13356396 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 3-206 |
| Cow position: | chr28:5144344-5144551 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 3-206 |
| Cow position: | chr28:27218495-27218293 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 3-207 |
| Cow position: | chr28:118784-118578 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 3-207 |
| Cow position: | chr28:8827334-8827133 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-208 |
| Cow position: | chr28:751398-751196 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 3-211 |
| Cow position: | chr28:2524115-2523908 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 31, 106 |
| Conread position: | 3-211 |
| Cow position: | chr28:4643600-4643805 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-211 |
| Cow position: | chr28:9426182-9426385 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 3-211 |
| Cow position: | chr28:10615777-10615981 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-211 |
| Cow position: | chr28:13527369-13527160 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-211 |
| Cow position: | chr28:17739995-17739788 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 3-211 |
| Cow position: | chr28:28765730-28765937 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 3-211 |
| Cow position: | chr28:33884572-33884368 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 3-214 |
| Cow position: | chr28:11814909-11815116 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-214 |
| Cow position: | chr28:20397198-20397408 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 3-214 |
| Cow position: | chr28:20759523-20759739 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 3-215 |
| Cow position: | chr28:9100099-9099897 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 3-215 |
| Cow position: | chr28:11866498-11866703 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-215 |
| Cow position: | chr28:19216982-19216782 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 190, 29 |
| Conread position: | 3-215 |
| Cow position: | chr28:26743801-26743587 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 3-215 |
| Cow position: | chr28:33322627-33322417 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 3-219 |
| Cow position: | chr28:5818008-5817793 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 3-222 |
| Cow position: | chr28:11346319-11346533 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-158 |
| Cow position: | chr28:5609749-5609901 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 146, 47 |
| Conread position: | 4-200 |
| Cow position: | chr28:26943983-26944182 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 4-206 |
| Cow position: | chr28:3200631-3200429 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 4-211 |
| Cow position: | chr28:12088477-12088683 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 4-211 |
| Cow position: | chr28:17071509-17071301 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 4-211 |
| Cow position: | chr28:26055647-26055445 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-213 |
| Cow position: | chr28:13245733-13245522 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 4-214 |
| Cow position: | chr28:34843403-34843612 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 5-145 |
| Cow position: | chr28:19118140-19118000 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 5-200 |
| Cow position: | chr28:3726041-3726235 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 51 |
| Conread position: | 5-200 |
| Cow position: | chr28:4307725-4307923 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 5-206 |
| Cow position: | chr28:26982568-26982768 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 8-200 |
| Cow position: | chr28:5867889-5867703 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 8-215 |
| Cow position: | chr28:6059297-6059507 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 8-220 |
| Cow position: | chr28:6283324-6283535 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 8-234 |
| Cow position: | chr28:17680790-17680563 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 10-201 |
| Cow position: | chr28:2819935-2819750 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 10-211 |
| Cow position: | chr28:9812435-9812243 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 10-211 |
| Cow position: | chr28:23793148-23793345 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 46 |
| Conread position: | 12-200 |
| Cow position: | chr28:11307353-11307542 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 13-141 |
| Cow position: | chr28:8167193-8167319 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 13-201 |
| Cow position: | chr28:7388612-7388792 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 8 |
| Conread position: | 14-211 |
| Cow position: | chr28:5224862-5224672 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 19-216 |
| Cow position: | chr28:21355386-21355192 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 21-160 |
| Cow position: | chr28:11365376-11365511 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 22-168 |
| Cow position: | chr28:19024585-19024441 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 23-201 |
| Cow position: | chr28:34247880-34248054 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-203 |
| Cow position: | chr28:18770231-18770057 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 24-207 |
| Cow position: | chr28:17398084-17398263 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 170, 97 |
| Conread position: | 28-170 |
| Cow position: | chr28:2743228-2743087 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 28-184 |
| Cow position: | chr28:4159101-4158947 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 28-195 |
| Cow position: | chr28:2899135-2898970 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 28-203 |
| Cow position: | chr28:8147718-8147890 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 28-206 |
| Cow position: | chr28:19025859-19026035 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 28-208 |
| Cow position: | chr28:27161181-27161359 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 174, 79 |
| Conread position: | 28-209 |
| Cow position: | chr28:2772856-2772678 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 173, 67 |
| Conread position: | 28-211 |
| Cow position: | chr28:7498001-7498182 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 28-213 |
| Cow position: | chr28:5236458-5236644 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 173, 93 |
| Conread position: | 28-215 |
| Cow position: | chr28:2752348-2752532 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 28-215 |
| Cow position: | chr28:19222006-19222188 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 28-215 |
| Cow position: | chr28:29434282-29434466 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 29-207 |
| Cow position: | chr28:17414330-17414504 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 92 |
| Conread position: | 30-162 |
| Cow position: | chr28:5365979-5366109 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 30-204 |
| Cow position: | chr28:4355690-4355517 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 149, 52 |
| Conread position: | 30-211 |
| Cow position: | chr28:20313421-20313243 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 35-214 |
| Cow position: | chr28:22321557-22321389 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 40-199 |
| Cow position: | chr28:23296456-23296299 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 40-206 |
| Cow position: | chr28:5204329-5204165 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 42-202 |
| Cow position: | chr28:13090394-13090551 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 42-203 |
| Cow position: | chr28:23047750-23047593 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 42-214 |
| Cow position: | chr28:5650606-5650775 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 44-202 |
| Cow position: | chr28:25763153-25762996 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 44-208 |
| Cow position: | chr28:25249484-25249322 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 46-193 |
| Cow position: | chr28:3143750-3143892 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 46-195 |
| Cow position: | chr28:17601426-17601573 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 46-198 |
| Cow position: | chr28:25677213-25677364 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 46-202 |
| Cow position: | chr28:32174757-32174603 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 75 |
| Conread position: | 46-202 |
| Cow position: | chr28:32179821-32179670 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 146, 77 |
| Conread position: | 46-215 |
| Cow position: | chr28:16085452-16085286 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 47-211 |
| Cow position: | chr28:3078555-3078716 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 47-214 |
| Cow position: | chr28:8149505-8149673 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 74 |
| Conread position: | 48-209 |
| Cow position: | chr28:23410197-23410359 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 78 |
| Conread position: | 48-211 |
| Cow position: | chr28:11585076-11585237 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 51-205 |
| Cow position: | chr28:24707020-24706868 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 51-212 |
| Cow position: | chr28:26922245-26922405 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 71 |
| Conread position: | 52-166 |
| Cow position: | chr28:16692045-16691933 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 52-218 |
| Cow position: | chr28:5166889-5166726 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 53-196 |
| Cow position: | chr28:23007609-23007750 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 53-215 |
| Cow position: | chr28:17601754-17601912 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-198 |
| Cow position: | chr28:11817844-11817989 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 54-205 |
| Cow position: | chr28:19079725-19079874 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 56-201 |
| Cow position: | chr28:4765794-4765649 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-215 |
| Cow position: | chr28:7156955-7156797 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 144, 66 |
| Conread position: | 61-215 |
| Cow position: | chr28:32365956-32365805 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 62-200 |
| Cow position: | chr28:21380992-21380857 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 66-214 |
| Cow position: | chr28:3160846-3160991 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 69-208 |
| Cow position: | chr28:5827056-5826918 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 54 |
Show alignments to all cow chromosomes.