Cow genome map

Conread name: Ss1.1-Spl1-SPL010027A09.5

Conread position: 1-189
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 122

Conread position: 1-198
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 1-201
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 1-202
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 131

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 2-164
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 2-195
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 2-201
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 115

Conread position: 2-204
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 126

Conread position: 2-209
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 12

Conread position: 3-141
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 119

Conread position: 3-141
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 117

Conread position: 3-145
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 143, 86

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 63

Conread position: 3-169
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 65

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 121

Conread position: 3-171
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 3-171
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 118

Conread position: 3-185
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 3-186
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 104

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 3-188
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 52, 31

Conread position: 3-188
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 128

Conread position: 3-192
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 11

Conread position: 3-192
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 31, 120

Conread position: 3-192
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 3-196
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 121

Conread position: 3-197
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 33

Conread position: 3-197
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 174, 48

Conread position: 3-198
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 122

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 3-200
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 126

Conread position: 3-200
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 35

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 121

Conread position: 3-200
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 120

Conread position: 3-200
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 120

Conread position: 3-200
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 60

Conread position: 3-201
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 59

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 55

Conread position: 3-202
Cow position:
Alignm length: 204
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 124

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 121

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 120

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 119, 27

Conread position: 3-202
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 118

Conread position: 3-203
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 121

Conread position: 3-203
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 3-203
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 162, 24

Conread position: 3-207
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-209
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 72

Conread position: 3-209
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 119

Conread position: 3-210
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 52

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 120

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 121

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 31, 121

Conread position: 3-211
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 122

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 3-211
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 120

Conread position: 3-211
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 120

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 41

Conread position: 3-214
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 89

Conread position: 3-214
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 17

Conread position: 3-214
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 72

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 55

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 120

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 28

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 76

Conread position: 4-158
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 4-161
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 79

Conread position: 4-200
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 106

Conread position: 4-200
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 130, 27

Conread position: 4-201
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 45

Conread position: 4-202
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 120

Conread position: 5-200
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 48

Conread position: 8-164
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 8-170
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 112

Conread position: 8-200
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 13

Conread position: 8-202
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 26, 116

Conread position: 8-206
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 116

Conread position: 8-215
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 9-214
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 10-161
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 99

Conread position: 16-184
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 107

Conread position: 21-201
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 100

Conread position: 28-154
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 94

Conread position: 28-163
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 63

Conread position: 28-178
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 14

Conread position: 28-198
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 28-199
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 28-201
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 28-215
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 95

Conread position: 30-203
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 30-206
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 93

Conread position: 32-199
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 90

Conread position: 32-211
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 33-179
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 33-199
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 34-214
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 35-201
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 11

Conread position: 35-205
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 89

Conread position: 36-175
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 36-200
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 36-211
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 86

Conread position: 37-216
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 41-199
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 42-213
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 46-200
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 46-200
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 75

Conread position: 46-206
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 46-218
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 105

Conread position: 47-195
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 76

Conread position: 47-201
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 76

Conread position: 47-203
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 49-197
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 75

Conread position: 49-208
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 49-214
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 75

Conread position: 51-204
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 52-200
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 41

Conread position: 52-205
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 53-211
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 65

Conread position: 65-200
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.