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Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL010027A09.5
        

               
Conread position:
               
1-164
               

               
Cow position:
               
chrX:17498519-17498356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chrX:14925469-14925307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chrX:1960229-1960395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:20345647-20345472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chrX:32877180-32877356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chrX:20957435-20957252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chrX:30824181-30824001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chrX:4559930-4559743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chrX:16762964-16762769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chrX:32910293-32910102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chrX:40680811-40680612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chrX:24170529-24170734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chrX:4632658-4632867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chrX:32330367-32330161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chrX:27228325-27228118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chrX:42331472-42331270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
171, 30
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chrX:20677951-20678147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chrX:12309189-12309395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chrX:42432318-42432526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:31489717-31489507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chrX:44961950-44961738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chrX:19761944-19761759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chrX:4327988-4328182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chrX:46770767-46770964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chrX:42836376-42836177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chrX:4109380-4109175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chrX:10237719-10237861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
3-146
               

               
Cow position:
               
chrX:37867448-37867305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chrX:41166635-41166775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chrX:11589173-11589322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chrX:37867627-37867477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-155
               

               
Cow position:
               
chrX:5097599-5097756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-156
               

               
Cow position:
               
chrX:35409946-35409794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
3-157
               

               
Cow position:
               
chrX:46068569-46068718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chrX:31986378-31986537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chrX:42875403-42875250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chrX:4092119-4091958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chrX:48822148-48822308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chrX:2314424-2314590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chrX:41790233-41790401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chrX:44995694-44995526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chrX:46910004-46909842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chrX:8642239-8642062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chrX:8759817-8759637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chrX:38094330-38094504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chrX:35285368-35285183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chrX:19717708-19717529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chrX:19018634-19018825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chrX:38302008-38301815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chrX:1122352-1122538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chrX:44054997-44054807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:15147003-15147190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:17524189-17524381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:18204269-18204464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:30962681-30962875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:38968089-38967891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chrX:39180039-39180230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chrX:43008804-43008611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chrX:34238917-34238720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chrX:37956042-37955848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chrX:27668768-27668958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chrX:31729631-31729442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chrX:35658991-35658800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chrX:40035245-40035441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:8731288-8731093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:27446877-27446685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:34222907-34222715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:34420930-34420733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:42449819-42450015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chrX:42492327-42492524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chrX:13924055-13923862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chrX:32420405-32420213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chrX:42246987-42247184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chrX:42855657-42855457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chrX:42894116-42893922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:11859342-11859540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:23335781-23335975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:26205260-26205451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:27074857-27075054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chrX:29478916-29478721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:11762817-11763005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:13868898-13868700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:20152042-20151856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:20887451-20887643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:21328108-21327907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:25035187-25035386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:32574510-32574313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chrX:48474103-48473903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chrX:11653961-11653759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chrX:38549640-38549440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
143, 116
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chrX:40337105-40336906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chrX:45598414-45598609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chrX:45875586-45875387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chrX:10516448-10516249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chrX:31294375-31294579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chrX:3806872-3806673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chrX:37489923-37489713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chrX:27508830-27509031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chrX:38208360-38208552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chrX:31436663-31436464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chrX:12290912-12290706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
190, 118
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chrX:17956883-17956682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chrX:11633876-11633669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chrX:29601635-29601841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chrX:36866367-36866159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chrX:6559262-6559462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:152099-151888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:20339699-20339907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:27145793-27145589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chrX:34543980-34543769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chrX:6407738-6407528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chrX:41027354-41027140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chrX:44192248-44192465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chrX:25815705-25815920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chrX:10831287-10831510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chrX:161597-161392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chrX:4645720-4645933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chrX:40108319-40108544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chrX:38587648-38587878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chrX:28068044-28067870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chrX:32747918-32747748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chrX:46588013-46587821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chrX:32318494-32318302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chrX:11825450-11825648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chrX:18111572-18111374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chrX:35885539-35885731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chrX:15546075-15545876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chrX:33001091-33000900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chrX:23188596-23188787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chrX:17231930-17231722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chrX:36976145-36975938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chrX:169348-169561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
4-217
               

               
Cow position:
               
chrX:26843073-26843291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chrX:6389271-6389113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
152, 97
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chrX:46533112-46533271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chrX:27705778-27705593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chrX:41941815-41941621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chrX:27261383-27261188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chrX:44339128-44339324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chrX:30672192-30672400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chrX:31948742-31948939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chrX:18964633-18964836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chrX:31250581-31250375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
8-155
               

               
Cow position:
               
chrX:34270750-34270604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
8-165
               

               
Cow position:
               
chrX:35681756-35681601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chrX:23098020-23098192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chrX:27667613-27667442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
8-196
               

               
Cow position:
               
chrX:27175188-27175005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chrX:48558935-48558747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chrX:38218902-38218713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chrX:11656267-11656079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chrX:31252597-31252415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chrX:31829274-31829463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chrX:45968335-45968144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chrX:46793561-46793750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
8-206
               

               
Cow position:
               
chrX:34503117-34502912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
8-206
               

               
Cow position:
               
chrX:39220275-39220070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
8-211
               

               
Cow position:
               
chrX:30133131-30133332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chrX:29680070-29680276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chrX:35276175-35275969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chrX:40685141-40685336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
11-169
               

               
Cow position:
               
chrX:27270559-27270404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 23
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chrX:24331962-24331774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
14-205
               

               
Cow position:
               
chrX:27431738-27431925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
14-215
               

               
Cow position:
               
chrX:38642429-38642232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
15-175
               

               
Cow position:
               
chrX:32235564-32235719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
19-204
               

               
Cow position:
               
chrX:23113461-23113279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
20-214
               

               
Cow position:
               
chrX:9365500-9365692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
21-201
               

               
Cow position:
               
chrX:8797424-8797253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chrX:40531868-40532052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
21-208
               

               
Cow position:
               
chrX:23562808-23562622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
24-164
               

               
Cow position:
               
chrX:23860824-23860960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
24-199
               

               
Cow position:
               
chrX:6278326-6278499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
26-202
               

               
Cow position:
               
chrX:43116895-43116721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
28-164
               

               
Cow position:
               
chrX:31373706-31373570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
28-196
               

               
Cow position:
               
chrX:43730056-43730221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
28-200
               

               
Cow position:
               
chrX:37129437-37129267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
28-201
               

               
Cow position:
               
chrX:11084895-11085066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
28-201
               

               
Cow position:
               
chrX:11717615-11717786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
28-202
               

               
Cow position:
               
chrX:27393858-27394030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chrX:32821197-32821022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chrX:5872485-5872309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chrX:6690094-6690268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chrX:33640145-33639970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chrX:878210-878394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chrX:20743771-20743591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chrX:7351465-7351285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chrX:23785816-23785632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
29-177
               

               
Cow position:
               
chrX:4612717-4612861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
29-195
               

               
Cow position:
               
chrX:28878006-28878171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chrX:25037154-25036987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chrX:29733426-29733599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
30-185
               

               
Cow position:
               
chrX:47342281-47342129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
30-197
               

               
Cow position:
               
chrX:15820760-15820596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
30-199
               

               
Cow position:
               
chrX:9416518-9416684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
30-200
               

               
Cow position:
               
chrX:45883805-45883974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
30-215
               

               
Cow position:
               
chrX:21665074-21665257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
31-203
               

               
Cow position:
               
chrX:42873552-42873382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chrX:22822210-22822036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
33-203
               

               
Cow position:
               
chrX:16575275-16575107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
33-206
               

               
Cow position:
               
chrX:5900625-5900459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
33-208
               

               
Cow position:
               
chrX:33204806-33204979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
33-210
               

               
Cow position:
               
chrX:17888261-17888431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
34-150
               

               
Cow position:
               
chrX:24547339-24547453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chrX:46433653-46433476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chrX:36313846-36313992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
40-203
               

               
Cow position:
               
chrX:31626821-31626978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chrX:6259990-6260159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
41-209
               

               
Cow position:
               
chrX:45113777-45113605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
42-200
               

               
Cow position:
               
chrX:29553438-29553283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
42-201
               

               
Cow position:
               
chrX:35269015-35268863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chrX:36514739-36514910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
43-182
               

               
Cow position:
               
chrX:38728887-38728750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
44-179
               

               
Cow position:
               
chrX:41810016-41810149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
44-206
               

               
Cow position:
               
chrX:29289730-29289570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
44-209
               

               
Cow position:
               
chrX:18046548-18046390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
44-210
               

               
Cow position:
               
chrX:9201701-9201536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 78
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chrX:20697457-20697622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
44-214
               

               
Cow position:
               
chrX:15006998-15007165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chrX:17966493-17966333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
45-214
               

               
Cow position:
               
chrX:7710388-7710554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
46-174
               

               
Cow position:
               
chrX:37062434-37062561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
46-176
               

               
Cow position:
               
chrX:27296370-27296506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
46-189
               

               
Cow position:
               
chrX:23266566-23266424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
46-200
               

               
Cow position:
               
chrX:38964258-38964106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
46-201
               

               
Cow position:
               
chrX:22914892-22915042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
46-202
               

               
Cow position:
               
chrX:6222977-6223132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
46-206
               

               
Cow position:
               
chrX:41238205-41238363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 75
               

               
Conread position:
               
46-209
               

               
Cow position:
               
chrX:31312179-31312018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chrX:45099278-45099114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chrX:25412055-25411891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
46-217
               

               
Cow position:
               
chrX:23498530-23498695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
47-215
               

               
Cow position:
               
chrX:31442679-31442847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
51-201
               

               
Cow position:
               
chrX:4043722-4043866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
51-214
               

               
Cow position:
               
chrX:43527653-43527494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
51-215
               

               
Cow position:
               
chrX:27511573-27511413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
57-203
               

               
Cow position:
               
chrX:24054816-24054666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
57-215
               

               
Cow position:
               
chrX:41123198-41123046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
62-201
               

               
Cow position:
               
chrX:16830354-16830221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
77-201
               

               
Cow position:
               
chrX:21004804-21004681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
79-207
               

               
Cow position:
               
chrX:35278446-35278321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
108-209
               

               
Cow position:
               
chrX:1572051-1572151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 14
               
Show alignments to all cow chromosomes.