Cow genome map
Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
Conread position: | 4-143 |
Cow position: | chr1:82880838-82880978 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 115, 49 |
Conread position: | 4-237 |
Cow position: | chr1:82419514-82419743 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 9-165 |
Cow position: | chr1:58050040-58050191 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 112, 11 |
Conread position: | 10-249 |
Cow position: | chr1:7435028-7434788 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 174 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 94, 21 |
Conread position: | 13-175 |
Cow position: | chr1:83789935-83790095 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 106, 21 |
Conread position: | 13-188 |
Cow position: | chr1:91840784-91840957 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 128 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 105, 18 |
Conread position: | 15-165 |
Cow position: | chr1:30087300-30087447 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 104, 19 |
Conread position: | 15-238 |
Cow position: | chr1:69239956-69240171 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 103, 22 |
Conread position: | 16-168 |
Cow position: | chr1:78060246-78060396 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 105, 18 |
Conread position: | 16-187 |
Cow position: | chr1:89093768-89093600 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 103, 18 |
Conread position: | 16-219 |
Cow position: | chr1:1778059-1778263 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 101, 82 |
Conread position: | 16-219 |
Cow position: | chr1:60452332-60452533 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 150 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 103, 18 |
Conread position: | 16-232 |
Cow position: | chr1:91977151-91977370 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 101, 15 |
Conread position: | 16-568 |
Cow position: | chr1:69346240-69345686 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 147 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 15, 56 |
Conread position: | 20-163 |
Cow position: | chr1:62197388-62197532 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 122 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 101, 33 |
Conread position: | 22-153 |
Cow position: | chr1:23713901-23714034 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 67, 14 |
Conread position: | 22-188 |
Cow position: | chr1:24229925-24229759 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 97, 13 |
Conread position: | 28-231 |
Cow position: | chr1:31114194-31114396 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 93, 22 |
Conread position: | 32-152 |
Cow position: | chr1:90862253-90862131 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-165 |
Cow position: | chr1:31342665-31342801 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 85, 23 |
Conread position: | 32-172 |
Cow position: | chr1:101657119-101657258 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 89, 69 |
Conread position: | 32-176 |
Cow position: | chr1:22590731-22590873 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 86, 14 |
Conread position: | 32-183 |
Cow position: | chr1:66990046-66990197 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-189 |
Cow position: | chr1:22605554-22605709 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 89, 37 |
Conread position: | 32-208 |
Cow position: | chr1:13797913-13797736 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 89, 22 |
Conread position: | 32-214 |
Cow position: | chr1:16984268-16984085 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-214 |
Cow position: | chr1:46241559-46241742 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-215 |
Cow position: | chr1:46283446-46283629 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 89, 18 |
Conread position: | 32-231 |
Cow position: | chr1:4269458-4269261 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 140 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-231 |
Cow position: | chr1:82420371-82420569 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 89, 23 |
Conread position: | 32-231 |
Cow position: | chr1:93579830-93580022 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 32-238 |
Cow position: | chr1:22419069-22418864 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 157 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 24, 7 |
Conread position: | 32-238 |
Cow position: | chr1:75266875-75266665 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 158 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 32-247 |
Cow position: | chr1:39066953-39067162 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 32-247 |
Cow position: | chr1:93441048-93440826 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 160 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 54, 158 |
Conread position: | 32-249 |
Cow position: | chr1:22607627-22607846 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 82, 16 |
Conread position: | 32-249 |
Cow position: | chr1:82422792-82423008 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 171 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 74, 18 |
Conread position: | 33-163 |
Cow position: | chr1:72734206-72734076 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 81, 5 |
Conread position: | 33-209 |
Cow position: | chr1:6971791-6971967 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 86, 81 |
Conread position: | 36-177 |
Cow position: | chr1:28469916-28469774 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 118 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 81, 22 |
Conread position: | 36-180 |
Cow position: | chr1:70256737-70256590 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 83, 14 |
Conread position: | 36-232 |
Cow position: | chr1:9147699-9147502 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 152 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 83, 14 |
Conread position: | 36-237 |
Cow position: | chr1:42184890-42184692 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 82, 14 |
Conread position: | 36-249 |
Cow position: | chr1:91819413-91819627 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 83, 14 |
Conread position: | 37-201 |
Cow position: | chr1:10768652-10768487 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 84, 13 |
Conread position: | 39-203 |
Cow position: | chr1:22442487-22442656 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 17, 151 |
Conread position: | 39-231 |
Cow position: | chr1:8319237-8319047 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 80, 11 |
Conread position: | 40-232 |
Cow position: | chr1:67905448-67905637 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 79, 14 |
Conread position: | 44-232 |
Cow position: | chr1:60785961-60786151 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 14, 89 |
Conread position: | 44-236 |
Cow position: | chr1:30068928-30068733 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 46-231 |
Cow position: | chr1:47636242-47636055 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 132 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 10, 142 |
Conread position: | 46-232 |
Cow position: | chr1:81469036-81469220 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 147 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 10, 18 |
Conread position: | 46-273 |
Cow position: | chr1:96313227-96312999 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 170 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 13, 144 |
Conread position: | 47-226 |
Cow position: | chr1:22659878-22659695 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 10, 86 |
Conread position: | 50-213 |
Cow position: | chr1:22607000-22607174 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 71, 158 |
Conread position: | 50-249 |
Cow position: | chr1:96142548-96142351 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 144 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 100, 51 |
Conread position: | 55-188 |
Cow position: | chr1:44128877-44129013 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 117-228 |
Cow position: | chr1:6059353-6059244 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 5, 100 |
Show alignments to all cow chromosomes.