Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 1-210 |
| Cow position: | chr10:3873630-3873424 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 2-210 |
| Cow position: | chr10:48450487-48450694 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 3-194 |
| Cow position: | chr10:52670760-52670953 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 4-190 |
| Cow position: | chr10:55103325-55103139 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 15-230 |
| Cow position: | chr10:14606248-14606462 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 157 |
| Conread position: | 15-238 |
| Cow position: | chr10:34730344-34730125 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 16-167 |
| Cow position: | chr10:38835322-38835174 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 16-204 |
| Cow position: | chr10:59524611-59524431 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 16-231 |
| Cow position: | chr10:50728528-50728738 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 16-236 |
| Cow position: | chr10:9372553-9372337 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 16-236 |
| Cow position: | chr10:23075098-23074875 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 16-249 |
| Cow position: | chr10:55117849-55117606 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 19-191 |
| Cow position: | chr10:23451651-23451823 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 20-172 |
| Cow position: | chr10:29707039-29706880 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 32-208 |
| Cow position: | chr10:9108989-9108811 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 32-210 |
| Cow position: | chr10:30615617-30615435 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 32-232 |
| Cow position: | chr10:50565682-50565483 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 32-238 |
| Cow position: | chr10:21341260-21341053 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 36-226 |
| Cow position: | chr10:41118444-41118256 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 36-229 |
| Cow position: | chr10:55116445-55116250 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 36-237 |
| Cow position: | chr10:9883121-9882937 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 45-231 |
| Cow position: | chr10:21010693-21010872 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 45-295 |
| Cow position: | chr10:14615357-14615615 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 49-201 |
| Cow position: | chr10:53822290-53822444 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 140 |
| Conread position: | 50-229 |
| Cow position: | chr10:30820361-30820541 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 50-231 |
| Cow position: | chr10:56916551-56916365 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 162 |
| Conread position: | 50-237 |
| Cow position: | chr10:55143172-55142986 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 71, 119 |
| Conread position: | 57-215 |
| Cow position: | chr10:14894456-14894296 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 132 |
Show alignments to all cow chromosomes.