Cow genome map
Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
Conread position: | 3-238 |
Cow position: | chr11:41226034-41226268 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 4-237 |
Cow position: | chr11:11396723-11396497 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 110, 27 |
Conread position: | 10-249 |
Cow position: | chr11:65753012-65753255 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 184 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 41, 24 |
Conread position: | 13-232 |
Cow position: | chr11:64035292-64035076 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 108, 18 |
Conread position: | 14-240 |
Cow position: | chr11:18139137-18139370 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 104, 17 |
Conread position: | 15-188 |
Cow position: | chr11:8557381-8557211 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 104, 19 |
Conread position: | 16-188 |
Cow position: | chr11:30474136-30473966 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 103, 18 |
Conread position: | 16-231 |
Cow position: | chr11:59969725-59969513 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 72, 18 |
Conread position: | 16-238 |
Cow position: | chr11:72344978-72345193 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 103, 20 |
Conread position: | 17-248 |
Cow position: | chr11:32770613-32770390 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 102, 14 |
Conread position: | 19-180 |
Cow position: | chr11:59989276-59989445 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 19-230 |
Cow position: | chr11:48074250-48074040 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 163 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 92, 15 |
Conread position: | 20-175 |
Cow position: | chr11:30220454-30220300 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 99, 15 |
Conread position: | 21-200 |
Cow position: | chr11:66494648-66494471 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 55 |
Conread position: | 32-235 |
Cow position: | chr11:14191388-14191595 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 158 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 32-237 |
Cow position: | chr11:12336321-12336525 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 32-238 |
Cow position: | chr11:37318548-37318341 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 85, 18 |
Conread position: | 32-249 |
Cow position: | chr11:70694306-70694082 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 32-278 |
Cow position: | chr11:6752969-6752727 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 171 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 87, 18 |
Conread position: | 33-180 |
Cow position: | chr11:75202389-75202536 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 88, 17 |
Conread position: | 33-184 |
Cow position: | chr11:33442508-33442360 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 88, 17 |
Conread position: | 33-231 |
Cow position: | chr11:45821091-45820890 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 86, 17 |
Conread position: | 36-201 |
Cow position: | chr11:83551715-83551549 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 85, 151 |
Conread position: | 36-228 |
Cow position: | chr11:12320634-12320830 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 12, 154 |
Conread position: | 36-231 |
Cow position: | chr11:32075750-32075557 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 138 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 83, 14 |
Conread position: | 36-246 |
Cow position: | chr11:65479545-65479753 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 80, 12 |
Conread position: | 42-249 |
Cow position: | chr11:35745706-35745499 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 13, 47 |
Conread position: | 43-188 |
Cow position: | chr11:25355833-25355982 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 44-208 |
Cow position: | chr11:40582518-40582679 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 44-246 |
Cow position: | chr11:37328350-37328148 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 77, 19 |
Conread position: | 46-188 |
Cow position: | chr11:2894863-2895009 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 46-210 |
Cow position: | chr11:50040660-50040493 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 9, 135 |
Conread position: | 46-229 |
Cow position: | chr11:58354915-58354735 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 12, 69 |
Conread position: | 46-231 |
Cow position: | chr11:40512149-40512337 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 144 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 10, 109 |
Conread position: | 46-231 |
Cow position: | chr11:71161716-71161900 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 148 |
Conread position: | 47-179 |
Cow position: | chr11:47885048-47884912 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 47-274 |
Cow position: | chr11:55183513-55183741 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 177 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 74, 142 |
Conread position: | 50-194 |
Cow position: | chr11:83086670-83086522 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 50-212 |
Cow position: | chr11:63667164-63667001 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 71, 127 |
Conread position: | 50-231 |
Cow position: | chr11:3612552-3612381 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 50-231 |
Cow position: | chr11:18179939-18180121 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 137 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 6, 138 |
Conread position: | 55-237 |
Cow position: | chr11:83266198-83266381 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 125 |
Conread position: | 56-236 |
Cow position: | chr11:15636084-15636262 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 58-217 |
Cow position: | chr11:35616812-35616977 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 132 |
Conread position: | 62-211 |
Cow position: | chr11:19228342-19228191 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 26, 127 |
Conread position: | 68-238 |
Cow position: | chr11:36397318-36397148 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 50, 121 |
Conread position: | 84-237 |
Cow position: | chr11:7066364-7066520 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 102-249 |
Cow position: | chr11:48059228-48059376 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 69 |
Show alignments to all cow chromosomes.