Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 4-247 |
| Cow position: | chr12:41468128-41468366 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 13-189 |
| Cow position: | chr12:42787433-42787260 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 13-232 |
| Cow position: | chr12:24334200-24333984 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 16-220 |
| Cow position: | chr12:46034959-46035161 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 25-231 |
| Cow position: | chr12:43992854-43992653 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 32-165 |
| Cow position: | chr12:4540353-4540218 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 32-231 |
| Cow position: | chr12:7443014-7442817 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 32-235 |
| Cow position: | chr12:40080457-40080237 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 32-239 |
| Cow position: | chr12:38589355-38589147 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 156 |
| Conread position: | 32-240 |
| Cow position: | chr12:48384473-48384673 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 195, 19 |
| Conread position: | 32-249 |
| Cow position: | chr12:2005854-2006066 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 33-177 |
| Cow position: | chr12:39123045-39122900 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 39-249 |
| Cow position: | chr12:26549993-26549782 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 40-237 |
| Cow position: | chr12:16557235-16557038 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 10 |
| Conread position: | 43-181 |
| Cow position: | chr12:17334765-17334624 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 44-234 |
| Cow position: | chr12:10682638-10682455 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 46-210 |
| Cow position: | chr12:1664726-1664894 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 46-226 |
| Cow position: | chr12:20840962-20841144 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 46-249 |
| Cow position: | chr12:13158649-13158852 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 50-189 |
| Cow position: | chr12:29863670-29863528 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 52-228 |
| Cow position: | chr12:19202252-19202428 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 58, 35 |
Show alignments to all cow chromosomes.