Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 6-182 |
| Cow position: | chr19:55149930-55149758 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 15-246 |
| Cow position: | chr19:44339135-44338911 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 16-231 |
| Cow position: | chr19:15972005-15972215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 16-247 |
| Cow position: | chr19:22429111-22428883 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 21-231 |
| Cow position: | chr19:11076418-11076626 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 32-192 |
| Cow position: | chr19:11973448-11973610 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 32-230 |
| Cow position: | chr19:11079248-11079048 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 140 |
| Conread position: | 32-231 |
| Cow position: | chr19:11589971-11590168 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 32-249 |
| Cow position: | chr19:25332-25114 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 33-245 |
| Cow position: | chr19:11784243-11784458 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 36-232 |
| Cow position: | chr19:51647431-51647631 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 36-250 |
| Cow position: | chr19:28339939-28339723 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 42-231 |
| Cow position: | chr19:4520047-4519856 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 72 |
| Conread position: | 50-192 |
| Cow position: | chr19:28610302-28610445 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 122 |
| Conread position: | 50-238 |
| Cow position: | chr19:53629809-53629998 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 68, 63 |
| Conread position: | 51-201 |
| Cow position: | chr19:26393183-26393327 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 59-183 |
| Cow position: | chr19:47325663-47325789 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 75 |
Show alignments to all cow chromosomes.