Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 4-238 |
| Cow position: | chr20:7776947-7776712 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 15-191 |
| Cow position: | chr20:12983744-12983569 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 16-183 |
| Cow position: | chr20:39354324-39354490 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 16-194 |
| Cow position: | chr20:13358083-13357913 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 16-231 |
| Cow position: | chr20:5540685-5540895 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 16-231 |
| Cow position: | chr20:24000486-24000279 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 32-139 |
| Cow position: | chr20:2885841-2885732 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-231 |
| Cow position: | chr20:26055926-26055725 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 32-247 |
| Cow position: | chr20:11065730-11065517 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 86, 140 |
| Conread position: | 36-183 |
| Cow position: | chr20:37071438-37071288 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 36-249 |
| Cow position: | chr20:37934684-37934895 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 44-249 |
| Cow position: | chr20:33705193-33705398 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 46-226 |
| Cow position: | chr20:35815578-35815758 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 73, 126 |
| Conread position: | 46-238 |
| Cow position: | chr20:19121421-19121227 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 46-247 |
| Cow position: | chr20:20071311-20071110 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 50-191 |
| Cow position: | chr20:3057432-3057289 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 50-200 |
| Cow position: | chr20:20768682-20768833 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 62-191 |
| Cow position: | chr20:3054076-3053943 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 64-231 |
| Cow position: | chr20:39973614-39973450 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.