Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 2-231 |
| Cow position: | chr24:18620803-18621032 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 4-201 |
| Cow position: | chr24:39304111-39304307 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 13-231 |
| Cow position: | chr24:3836084-3836295 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 13-252 |
| Cow position: | chr24:39467218-39466983 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 16-172 |
| Cow position: | chr24:39460293-39460140 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 16-183 |
| Cow position: | chr24:236231-236062 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 16-209 |
| Cow position: | chr24:26892059-26892248 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 16-249 |
| Cow position: | chr24:263794-264028 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 16-263 |
| Cow position: | chr24:139926-140172 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 19-229 |
| Cow position: | chr24:18401476-18401683 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 32-156 |
| Cow position: | chr24:26108390-26108515 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 32-172 |
| Cow position: | chr24:4800257-4800118 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 32-194 |
| Cow position: | chr24:38036926-38037087 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 115 |
| Conread position: | 32-202 |
| Cow position: | chr24:30758754-30758583 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 32-249 |
| Cow position: | chr24:155705-155922 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 33-232 |
| Cow position: | chr24:8376538-8376740 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 36-208 |
| Cow position: | chr24:39465101-39464928 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 36-271 |
| Cow position: | chr24:20927492-20927257 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 46-172 |
| Cow position: | chr24:13161536-13161405 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 46-201 |
| Cow position: | chr24:266052-266210 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 49-189 |
| Cow position: | chr24:13766975-13766834 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 51-154 |
| Cow position: | chr24:18463786-18463892 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.