Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 15-188 |
| Cow position: | chr25:7510132-7510305 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 16-170 |
| Cow position: | chr25:16695663-16695816 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 16-189 |
| Cow position: | chr25:21516606-21516442 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 16-206 |
| Cow position: | chr25:21516928-21516748 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 16-209 |
| Cow position: | chr25:11411282-11411469 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 16-214 |
| Cow position: | chr25:26313948-26313754 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 16-222 |
| Cow position: | chr25:20255479-20255280 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 16-236 |
| Cow position: | chr25:21364486-21364698 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 16-237 |
| Cow position: | chr25:20645892-20645676 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 32-171 |
| Cow position: | chr25:26236591-26236732 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-183 |
| Cow position: | chr25:21137910-21138061 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-231 |
| Cow position: | chr25:16129224-16129420 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 32-237 |
| Cow position: | chr25:21036656-21036862 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-249 |
| Cow position: | chr25:19431898-19431681 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 45-192 |
| Cow position: | chr25:2497350-2497496 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 46-216 |
| Cow position: | chr25:31115266-31115101 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 50-218 |
| Cow position: | chr25:23821265-23821102 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 50-238 |
| Cow position: | chr25:24750588-24750397 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 6, 170 |
| Conread position: | 50-238 |
| Cow position: | chr25:34420507-34420321 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 50-247 |
| Cow position: | chr25:20193384-20193183 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 76-230 |
| Cow position: | chr25:18456042-18455890 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 90 |
Show alignments to all cow chromosomes.