Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 4-214 |
| Cow position: | chr27:23914243-23914449 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 11-191 |
| Cow position: | chr27:12474394-12474565 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 14-233 |
| Cow position: | chr27:22218522-22218736 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 16-201 |
| Cow position: | chr27:7139836-7139655 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 16-201 |
| Cow position: | chr27:7148254-7148074 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 105, 15 |
| Conread position: | 16-229 |
| Cow position: | chr27:15511880-15511669 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 32-167 |
| Cow position: | chr27:28546521-28546657 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 32-191 |
| Cow position: | chr27:18673469-18673309 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 32-238 |
| Cow position: | chr27:29665467-29665253 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 32-248 |
| Cow position: | chr27:23996384-23996600 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 32-249 |
| Cow position: | chr27:28157857-28157643 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 32-273 |
| Cow position: | chr27:20009810-20009564 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 77 |
| Conread position: | 36-168 |
| Cow position: | chr27:18731354-18731487 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 39-194 |
| Cow position: | chr27:16587563-16587724 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 39-249 |
| Cow position: | chr27:18025105-18025311 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 43-191 |
| Cow position: | chr27:4252873-4252726 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 46-201 |
| Cow position: | chr27:30992461-30992618 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 50-172 |
| Cow position: | chr27:23064434-23064310 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 90-249 |
| Cow position: | chr27:17826515-17826674 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 50 |
Show alignments to all cow chromosomes.