Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 13-249 |
| Cow position: | chr28:7340469-7340703 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 15-202 |
| Cow position: | chr28:28148304-28148118 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 15-231 |
| Cow position: | chr28:30126804-30126592 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 15-240 |
| Cow position: | chr28:33201029-33201249 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 19-181 |
| Cow position: | chr28:29048347-29048507 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 32-183 |
| Cow position: | chr28:6951861-6952011 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-237 |
| Cow position: | chr28:19219944-19219740 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-249 |
| Cow position: | chr28:9715384-9715160 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 36-242 |
| Cow position: | chr28:19381071-19381293 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 40-249 |
| Cow position: | chr28:5703249-5703456 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 45-153 |
| Cow position: | chr28:26251857-26251969 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 46-189 |
| Cow position: | chr28:34846973-34847118 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 127 |
| Conread position: | 53-178 |
| Cow position: | chr28:2052144-2052016 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 64-273 |
| Cow position: | chr28:33064536-33064324 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 123 |
Show alignments to all cow chromosomes.