Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01A090064.5 |
| Conread position: | 4-201 |
| Cow position: | chr7:42320828-42320627 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 20, 187 |
| Conread position: | 4-242 |
| Cow position: | chr7:43277422-43277185 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 15-204 |
| Cow position: | chr7:12482518-12482331 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 15-228 |
| Cow position: | chr7:40960868-40960659 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 15-237 |
| Cow position: | chr7:59938271-59938499 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 16-213 |
| Cow position: | chr7:24035209-24035013 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 16-230 |
| Cow position: | chr7:42325282-42325071 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 16-231 |
| Cow position: | chr7:37680947-37681157 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 16-237 |
| Cow position: | chr7:50740942-50741159 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 20-191 |
| Cow position: | chr7:16292217-16292387 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 32-158 |
| Cow position: | chr7:8332858-8332730 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 32-167 |
| Cow position: | chr7:21038806-21038943 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 32-213 |
| Cow position: | chr7:27119184-27118999 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 32-231 |
| Cow position: | chr7:33444124-33443928 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 32-237 |
| Cow position: | chr7:59928402-59928595 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 32-238 |
| Cow position: | chr7:55303249-55303459 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 191 |
| Conread position: | 32-240 |
| Cow position: | chr7:35445221-35445427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 32-247 |
| Cow position: | chr7:26776357-26776147 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 32-249 |
| Cow position: | chr7:24578482-24578268 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 32-249 |
| Cow position: | chr7:27117243-27117465 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 32-249 |
| Cow position: | chr7:43987460-43987244 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 33-191 |
| Cow position: | chr7:57850737-57850893 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 137, 17 |
| Conread position: | 36-231 |
| Cow position: | chr7:14367035-14366839 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 38-200 |
| Cow position: | chr7:27094599-27094432 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 40-238 |
| Cow position: | chr7:8805936-8806126 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 45-202 |
| Cow position: | chr7:6166261-6166103 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 133 |
| Conread position: | 46-230 |
| Cow position: | chr7:23293307-23293495 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 87-249 |
| Cow position: | chr7:59515913-59516080 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 87-249 |
| Cow position: | chr7:62672424-62672260 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 102 |
Show alignments to all cow chromosomes.