Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL01C050077.5
        

               Conread position:
               39-150
               

               Cow position:
               chr16:13286354-13286243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               138-253
               

               Cow position:
               chr16:13285946-13285830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               243-340
               

               Cow position:
               chr16:17999532-17999435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-417
               

               Cow position:
               chr16:17998441-17998365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               77
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               412-519
               

               Cow position:
               chr16:17997387-17997280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               518-609
               

               Cow position:
               chr16:17996323-17996232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               609-797
               

               Cow position:
               chr16:17994669-17994482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               106, 0
               
Show alignments to all cow chromosomes.