Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-218 |
| Cow position: | chr1:34690100-34690326 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 1-293 |
| Cow position: | chr1:31418457-31418142 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 274 |
| Conread position: | 1-297 |
| Cow position: | chr1:40512967-40512667 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 47-644 |
| Cow position: | chr1:67286961-67287577 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 242-652 |
| Cow position: | chr1:57568277-57568698 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 242-732 |
| Cow position: | chr1:79636610-79636117 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 307-583 |
| Cow position: | chr1:58178568-58178300 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 310-645 |
| Cow position: | chr1:67315362-67315694 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 311-810 |
| Cow position: | chr1:91899415-91899930 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 91 |
| Conread position: | 312-643 |
| Cow position: | chr1:67292057-67292384 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 91 |
| Conread position: | 312-652 |
| Cow position: | chr1:43570984-43570652 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 89 |
| Conread position: | 313-626 |
| Cow position: | chr1:32662162-32662486 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 313-644 |
| Cow position: | chr1:17941361-17941030 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 313-644 |
| Cow position: | chr1:31365662-31365335 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 313-645 |
| Cow position: | chr1:31418090-31417761 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 313-645 |
| Cow position: | chr1:82366605-82366940 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-652 |
| Cow position: | chr1:86547718-86547379 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-731 |
| Cow position: | chr1:23052217-23052624 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 268, 43 |
| Conread position: | 313-807 |
| Cow position: | chr1:13450627-13451115 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 315-467 |
| Cow position: | chr1:85780351-85780204 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-468 |
| Cow position: | chr1:72981696-72981844 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-528 |
| Cow position: | chr1:40512619-40512419 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 315-551 |
| Cow position: | chr1:24651708-24651940 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 87 |
| Conread position: | 315-584 |
| Cow position: | chr1:72943968-72944223 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 315-615 |
| Cow position: | chr1:3385592-3385291 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 315-626 |
| Cow position: | chr1:29033546-29033864 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 120, 83 |
| Conread position: | 315-629 |
| Cow position: | chr1:18027341-18027019 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 315-641 |
| Cow position: | chr1:69403409-69403738 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-643 |
| Cow position: | chr1:76545112-76544782 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 72 |
| Conread position: | 315-644 |
| Cow position: | chr1:21999528-21999199 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-644 |
| Cow position: | chr1:25179604-25179272 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-644 |
| Cow position: | chr1:33551353-33551681 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-644 |
| Cow position: | chr1:52325710-52325384 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 204, 21 |
| Conread position: | 315-644 |
| Cow position: | chr1:72186451-72186124 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-645 |
| Cow position: | chr1:8825478-8825805 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 315-645 |
| Cow position: | chr1:28278395-28278728 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 315-645 |
| Cow position: | chr1:68607115-68606785 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 315-645 |
| Cow position: | chr1:76752224-76751890 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-645 |
| Cow position: | chr1:102434610-102434282 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-651 |
| Cow position: | chr1:33712495-33712856 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 315-652 |
| Cow position: | chr1:5502394-5502731 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | chr1:11860812-11860486 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 88 |
| Conread position: | 315-652 |
| Cow position: | chr1:12061786-12061451 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 315-652 |
| Cow position: | chr1:17036136-17035796 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | chr1:28873503-28873843 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-652 |
| Cow position: | chr1:30534595-30534255 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 315-652 |
| Cow position: | chr1:52358849-52358509 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 77 |
| Conread position: | 315-652 |
| Cow position: | chr1:56143908-56143569 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 315-652 |
| Cow position: | chr1:58336264-58336601 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | chr1:63605350-63605013 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | chr1:65386755-65387091 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | chr1:69922009-69921672 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 315-652 |
| Cow position: | chr1:73070627-73070292 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 315-652 |
| Cow position: | chr1:82923750-82923424 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-652 |
| Cow position: | chr1:88131200-88131539 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | chr1:91892694-91892353 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 315-652 |
| Cow position: | chr1:93854950-93855282 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 315-652 |
| Cow position: | chr1:97226282-97225948 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-658 |
| Cow position: | chr1:30519116-30519464 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 165, 85 |
| Conread position: | 315-732 |
| Cow position: | chr1:89770234-89769843 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 315-811 |
| Cow position: | chr1:55777008-55777497 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 315-814 |
| Cow position: | chr1:62244217-62243724 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | chr1:25550388-25550880 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | chr1:26518458-26517967 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 315-816 |
| Cow position: | chr1:42736880-42737376 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 315-816 |
| Cow position: | chr1:49973762-49973269 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | chr1:72081206-72081685 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 316-586 |
| Cow position: | chr1:57657227-57657489 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 317-551 |
| Cow position: | chr1:18879968-18879741 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 317-564 |
| Cow position: | chr1:85882423-85882665 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 317-567 |
| Cow position: | chr1:20829314-20829558 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-585 |
| Cow position: | chr1:58883637-58883373 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-586 |
| Cow position: | chr1:91751038-91750772 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-623 |
| Cow position: | chr1:33389561-33389855 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 317-644 |
| Cow position: | chr1:55321710-55321395 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 317-645 |
| Cow position: | chr1:16217225-16216905 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 317-645 |
| Cow position: | chr1:33851710-33852041 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | chr1:67834716-67834383 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | chr1:99913847-99914179 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 317-648 |
| Cow position: | chr1:89425998-89426333 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | chr1:29362721-29363058 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 317-650 |
| Cow position: | chr1:40053780-40054115 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 317-650 |
| Cow position: | chr1:53198974-53199301 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | chr1:80358756-80358420 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | chr1:82564928-82565264 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-651 |
| Cow position: | chr1:29034721-29035050 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:11291681-11291347 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:39544194-39544529 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 317-652 |
| Cow position: | chr1:40308700-40309028 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:40574638-40574976 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:56163974-56164312 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:56723580-56723921 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 317-652 |
| Cow position: | chr1:57424418-57424078 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 317-652 |
| Cow position: | chr1:71562148-71561810 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr1:79456542-79456207 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 317-652 |
| Cow position: | chr1:82653078-82653428 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 317-652 |
| Cow position: | chr1:82912719-82912372 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 317-652 |
| Cow position: | chr1:102549667-102549986 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 317-721 |
| Cow position: | chr1:40684272-40683868 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 85 |
| Conread position: | 317-732 |
| Cow position: | chr1:89481216-89481630 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 114, 81 |
| Conread position: | 317-791 |
| Cow position: | chr1:95239794-95240262 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 85 |
| Conread position: | 317-800 |
| Cow position: | chr1:8554752-8555231 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 317-807 |
| Cow position: | chr1:21087838-21088324 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-807 |
| Cow position: | chr1:56490275-56490761 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-807 |
| Cow position: | chr1:59209726-59209239 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-807 |
| Cow position: | chr1:60339730-60340210 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 317-810 |
| Cow position: | chr1:5355551-5356039 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | chr1:28711341-28711804 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-810 |
| Cow position: | chr1:31397115-31397604 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 318-528 |
| Cow position: | chr1:69250714-69250919 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 319-585 |
| Cow position: | chr1:86698785-86698525 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 319-723 |
| Cow position: | chr1:34692654-34693058 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 319-810 |
| Cow position: | chr1:17012312-17011820 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-810 |
| Cow position: | chr1:69766889-69767367 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 321-644 |
| Cow position: | chr1:22843078-22843397 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 321-733 |
| Cow position: | chr1:21936611-21936184 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 301 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 322-616 |
| Cow position: | chr1:9382123-9381821 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 323-636 |
| Cow position: | chr1:15026793-15027108 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 323-659 |
| Cow position: | chr1:57973234-57972907 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 324-652 |
| Cow position: | chr1:85792114-85792441 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 78 |
| Conread position: | 324-652 |
| Cow position: | chr1:94660110-94660438 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 78 |
| Conread position: | 333-725 |
| Cow position: | chr1:84150645-84151050 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 73 |
| Conread position: | 335-650 |
| Cow position: | chr1:44044225-44044543 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 336-652 |
| Cow position: | chr1:6194683-6194997 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 336-652 |
| Cow position: | chr1:77511481-77511176 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 337-648 |
| Cow position: | chr1:31403043-31402732 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 95, 65 |
| Conread position: | 337-814 |
| Cow position: | chr1:98659436-98658991 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 323 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 340-652 |
| Cow position: | chr1:48246285-48246595 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 342-645 |
| Cow position: | chr1:1460734-1460458 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 342-652 |
| Cow position: | chr1:9258946-9259243 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 350-585 |
| Cow position: | chr1:57366664-57366434 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 352-643 |
| Cow position: | chr1:77111567-77111275 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 353-584 |
| Cow position: | chr1:55156539-55156312 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 357-644 |
| Cow position: | chr1:86610613-86610901 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 162, 46 |
| Conread position: | 364-652 |
| Cow position: | chr1:33896214-33896505 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 371-643 |
| Cow position: | chr1:76621204-76620928 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 382-645 |
| Cow position: | chr1:24443836-24443566 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 49 |
| Conread position: | 386-652 |
| Cow position: | chr1:66999503-66999775 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 396-626 |
| Cow position: | chr1:77117069-77116833 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 402-813 |
| Cow position: | chr1:79110997-79111407 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 416-638 |
| Cow position: | chr1:29979662-29979433 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 441-644 |
| Cow position: | chr1:101862342-101862137 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 456-650 |
| Cow position: | chr1:47541191-47541386 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 475-652 |
| Cow position: | chr1:62805592-62805414 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 479-652 |
| Cow position: | chr1:72038970-72038796 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 109, 53 |
| Conread position: | 479-652 |
| Cow position: | chr1:72984088-72984266 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 501-650 |
| Cow position: | chr1:20423127-20422969 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 501-815 |
| Cow position: | chr1:88564194-88563887 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 525-652 |
| Cow position: | chr1:81863878-81863741 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.