Cow genome map

Conread name: Ss1.1-Spl1-SPL01C070055.5

Conread position: 1-218
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 138

Conread position: 1-293
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 274

Conread position: 1-297
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 32

Conread position: 47-644
Cow position:
Alignm length: 633
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 88

Conread position: 242-652
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 242-732
Cow position:
Alignm length: 514
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 307-583
Cow position:
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 13

Conread position: 310-645
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 28

Conread position: 311-810
Cow position:
Alignm length: 522
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 91

Conread position: 312-643
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 91

Conread position: 312-652
Cow position:
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 313-626
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 23

Conread position: 313-644
Cow position:
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 81

Conread position: 313-644
Cow position:
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 81

Conread position: 313-645
Cow position:
Alignm length: 341
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 19

Conread position: 313-645
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 119, 89

Conread position: 313-652
Cow position:
Alignm length: 347
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 89

Conread position: 313-731
Cow position:
Alignm length: 438
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 268, 43

Conread position: 313-807
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 43

Conread position: 315-467
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 87

Conread position: 315-468
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 76

Conread position: 315-528
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 90

Conread position: 315-551
Cow position:
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 87

Conread position: 315-584
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 315-615
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 315-626
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 120, 83

Conread position: 315-629
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 94

Conread position: 315-641
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-643
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 315-644
Cow position:
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 315-644
Cow position:
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-644
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-644
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 204, 21

Conread position: 315-644
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 315-645
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 88

Conread position: 315-645
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 79

Conread position: 315-645
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 315-645
Cow position:
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 315-645
Cow position:
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-651
Cow position:
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 60

Conread position: 315-652
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position:
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 88

Conread position: 315-652
Cow position:
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 52

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 87

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 79

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 75

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 77

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-652
Cow position:
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 76

Conread position: 315-652
Cow position:
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 76

Conread position: 315-652
Cow position:
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 73

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-652
Cow position:
Alignm length: 349
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 80

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 80

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 315-658
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 165, 85

Conread position: 315-732
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 58

Conread position: 315-811
Cow position:
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 21

Conread position: 315-814
Cow position:
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-816
Cow position:
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-816
Cow position:
Alignm length: 515
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 69

Conread position: 315-816
Cow position:
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 72

Conread position: 315-816
Cow position:
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-816
Cow position:
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 316-586
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 77

Conread position: 317-551
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 317-564
Cow position:
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 77

Conread position: 317-567
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 317-585
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 74

Conread position: 317-586
Cow position:
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-623
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 19

Conread position: 317-644
Cow position:
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 25

Conread position: 317-645
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 153, 65

Conread position: 317-645
Cow position:
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-645
Cow position:
Alignm length: 341
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-645
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 317-648
Cow position:
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-650
Cow position:
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 317-650
Cow position:
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-651
Cow position:
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 86

Conread position: 317-652
Cow position:
Alignm length: 340
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 87

Conread position: 317-652
Cow position:
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 88

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 74

Conread position: 317-652
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 110

Conread position: 317-652
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 71

Conread position: 317-652
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 52

Conread position: 317-721
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 85

Conread position: 317-732
Cow position:
Alignm length: 436
Alignm identity: 300
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 114, 81

Conread position: 317-791
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 85

Conread position: 317-800
Cow position:
Alignm length: 497
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 85

Conread position: 317-807
Cow position:
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-807
Cow position:
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 85

Conread position: 317-807
Cow position:
Alignm length: 506
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-807
Cow position:
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 25

Conread position: 317-810
Cow position:
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-810
Cow position:
Alignm length: 500
Alignm identity: 328
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 67

Conread position: 317-810
Cow position:
Alignm length: 509
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 318-528
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 71

Conread position: 319-585
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 72

Conread position: 319-723
Cow position:
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 15

Conread position: 319-810
Cow position:
Alignm length: 503
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 83

Conread position: 319-810
Cow position:
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 83

Conread position: 321-644
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 20

Conread position: 321-733
Cow position:
Alignm length: 444
Alignm identity: 301
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 71

Conread position: 322-616
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 81

Conread position: 323-636
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 100, 13

Conread position: 323-659
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 324-652
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 78

Conread position: 324-652
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 78

Conread position: 333-725
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 73

Conread position: 335-650
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 67

Conread position: 336-652
Cow position:
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 58

Conread position: 336-652
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 7, 45

Conread position: 337-648
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 65

Conread position: 337-814
Cow position:
Alignm length: 481
Alignm identity: 323
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 95, 31

Conread position: 340-652
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 63

Conread position: 342-645
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 60

Conread position: 342-652
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 60

Conread position: 350-585
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 41

Conread position: 352-643
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 11

Conread position: 353-584
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 49

Conread position: 357-644
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 162, 46

Conread position: 364-652
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 38

Conread position: 371-643
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 60, 23

Conread position: 382-645
Cow position:
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 49

Conread position: 386-652
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 16

Conread position: 396-626
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 85

Conread position: 402-813
Cow position:
Alignm length: 429
Alignm identity: 277
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 53

Conread position: 416-638
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 65

Conread position: 441-644
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 123, 10

Conread position: 456-650
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 106, 24

Conread position: 475-652
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 26

Conread position: 479-652
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 109, 53

Conread position: 479-652
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 22

Conread position: 501-650
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 501-815
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 28

Conread position: 525-652
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.