Cow genome map
Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
Conread position: | 1-297 |
Cow position: | chr10:28931287-28930989 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 227 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 88, 134 |
Conread position: | 1-816 |
Cow position: | chr10:38545792-38544969 (view UCSC Genome Browser custom track) |
Alignm length: | 860 |
Alignm identity: | 580 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 24 |
Conread position: | 30-222 |
Cow position: | chr10:42629086-42629284 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 104 |
Conread position: | 41-584 |
Cow position: | chr10:14861405-14861962 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 368 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 53, 92 |
Conread position: | 262-645 |
Cow position: | chr10:58596797-58597167 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 262 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 46, 41 |
Conread position: | 283-732 |
Cow position: | chr10:24311932-24311479 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 275 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 64, 71 |
Conread position: | 311-650 |
Cow position: | chr10:41567544-41567883 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 92 |
Conread position: | 312-642 |
Cow position: | chr10:38403744-38403416 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 225 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 313-652 |
Cow position: | chr10:39040852-39040519 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 78 |
Conread position: | 315-518 |
Cow position: | chr10:17432804-17432614 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 116, 78 |
Conread position: | 315-525 |
Cow position: | chr10:37770818-37771022 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 167 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 116, 77 |
Conread position: | 315-572 |
Cow position: | chr10:25564815-25564565 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 101, 87 |
Conread position: | 315-585 |
Cow position: | chr10:1377693-1377955 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-610 |
Cow position: | chr10:3542777-3542485 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 208 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 116, 73 |
Conread position: | 315-614 |
Cow position: | chr10:29102131-29101837 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 217 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 40, 33 |
Conread position: | 315-643 |
Cow position: | chr10:38344908-38344583 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 78 |
Conread position: | 315-644 |
Cow position: | chr10:31538114-31538437 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 233 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 20, 71 |
Conread position: | 315-644 |
Cow position: | chr10:57989541-57989212 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 87 |
Conread position: | 315-644 |
Cow position: | chr10:62408398-62408066 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-645 |
Cow position: | chr10:14335395-14335070 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-652 |
Cow position: | chr10:2120561-2120225 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-652 |
Cow position: | chr10:7281642-7281302 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 79 |
Conread position: | 315-652 |
Cow position: | chr10:19512057-19512396 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 89 |
Conread position: | 315-652 |
Cow position: | chr10:19715117-19714779 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 28 |
Conread position: | 315-652 |
Cow position: | chr10:30685062-30684727 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 76 |
Conread position: | 315-652 |
Cow position: | chr10:38538051-38537711 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 77 |
Conread position: | 315-652 |
Cow position: | chr10:41877363-41877703 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 81 |
Conread position: | 315-732 |
Cow position: | chr10:29846199-29845761 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 79 |
Conread position: | 315-732 |
Cow position: | chr10:31524548-31524967 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 89 |
Conread position: | 315-816 |
Cow position: | chr10:16925983-16926476 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 76 |
Conread position: | 315-816 |
Cow position: | chr10:22101685-22102179 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 79 |
Conread position: | 316-645 |
Cow position: | chr10:8326846-8326527 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 89 |
Conread position: | 317-475 |
Cow position: | chr10:39816038-39815886 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 115, 13 |
Conread position: | 317-490 |
Cow position: | chr10:32578735-32578902 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 134 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 115, 67 |
Conread position: | 317-541 |
Cow position: | chr10:41388658-41388440 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 115, 77 |
Conread position: | 317-567 |
Cow position: | chr10:51952174-51951934 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-581 |
Cow position: | chr10:39779688-39779940 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 19 |
Conread position: | 317-626 |
Cow position: | chr10:14929336-14929641 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 223 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 136, 37 |
Conread position: | 317-645 |
Cow position: | chr10:24977311-24976983 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 242 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 115, 33 |
Conread position: | 317-650 |
Cow position: | chr10:5849178-5848843 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 67 |
Conread position: | 317-650 |
Cow position: | chr10:56065121-56065457 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 85 |
Conread position: | 317-651 |
Cow position: | chr10:64302315-64301987 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 242 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 18, 38 |
Conread position: | 317-652 |
Cow position: | chr10:4191790-4191462 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-652 |
Cow position: | chr10:14804283-14804620 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 45 |
Conread position: | 317-652 |
Cow position: | chr10:19495838-19495494 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 60 |
Conread position: | 317-652 |
Cow position: | chr10:40151800-40151459 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 88 |
Conread position: | 317-652 |
Cow position: | chr10:41157895-41158227 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-807 |
Cow position: | chr10:21400223-21399738 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-807 |
Cow position: | chr10:21740304-21739816 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 58 |
Conread position: | 317-807 |
Cow position: | chr10:39180233-39180723 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 74 |
Conread position: | 317-810 |
Cow position: | chr10:11698691-11699179 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 69 |
Conread position: | 317-810 |
Cow position: | chr10:28641987-28642469 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 64 |
Conread position: | 317-810 |
Cow position: | chr10:47907378-47907866 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-816 |
Cow position: | chr10:8290431-8290920 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 74 |
Conread position: | 317-816 |
Cow position: | chr10:21487370-21487863 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 74 |
Conread position: | 317-816 |
Cow position: | chr10:26597067-26597556 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 80 |
Conread position: | 318-652 |
Cow position: | chr10:55093714-55094052 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 86 |
Conread position: | 319-638 |
Cow position: | chr10:32557810-32558125 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 224 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 113, 82 |
Conread position: | 321-645 |
Cow position: | chr10:66899905-66899586 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 228 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 14, 31 |
Conread position: | 321-816 |
Cow position: | chr10:50135015-50135503 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 71 |
Conread position: | 323-550 |
Cow position: | chr10:28115643-28115428 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 162 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 93, 21 |
Conread position: | 334-807 |
Cow position: | chr10:11685180-11684712 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 68 |
Conread position: | 338-644 |
Cow position: | chr10:39879886-39879582 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 207, 44 |
Conread position: | 338-644 |
Cow position: | chr10:57482571-57482276 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 216 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 245, 53 |
Conread position: | 350-652 |
Cow position: | chr10:124873-125178 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 42 |
Conread position: | 350-652 |
Cow position: | chr10:280127-279822 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 52 |
Conread position: | 352-652 |
Cow position: | chr10:61927713-61927416 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 213 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 159, 51 |
Conread position: | 357-548 |
Cow position: | chr10:5675-5860 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 75, 46 |
Conread position: | 357-618 |
Cow position: | chr10:8340367-8340626 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 22 |
Conread position: | 359-645 |
Cow position: | chr10:19544875-19544594 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 73, 28 |
Conread position: | 359-652 |
Cow position: | chr10:42110905-42111192 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 210 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 202, 10 |
Conread position: | 359-652 |
Cow position: | chr10:42749342-42749621 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 199 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 212, 45 |
Conread position: | 365-652 |
Cow position: | chr10:29632276-29631981 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 83 |
Conread position: | 366-661 |
Cow position: | chr10:42229321-42229619 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 112, 37 |
Conread position: | 369-662 |
Cow position: | chr10:46196000-46196307 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 53 |
Conread position: | 374-721 |
Cow position: | chr10:15084509-15084870 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 251 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 386-815 |
Cow position: | chr10:33347859-33348287 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 92 |
Conread position: | 396-652 |
Cow position: | chr10:21480445-21480710 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 187 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 36, 55 |
Conread position: | 404-645 |
Cow position: | chr10:20370579-20370345 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 183 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 23, 58 |
Conread position: | 409-650 |
Cow position: | chr10:49990975-49991225 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 29, 72 |
Conread position: | 419-607 |
Cow position: | chr10:25978645-25978452 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 11, 62 |
Conread position: | 440-585 |
Cow position: | chr10:10582423-10582569 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 119 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 124, 40 |
Conread position: | 452-581 |
Cow position: | chr10:15860103-15859977 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 466-621 |
Cow position: | chr10:24262724-24262561 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 98, 14 |
Conread position: | 485-810 |
Cow position: | chr10:21731237-21730912 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 229 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 78, 176 |
Conread position: | 492-810 |
Cow position: | chr10:34285874-34286193 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 222 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 70, 169 |
Conread position: | 505-621 |
Cow position: | chr10:27664901-27664776 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.