Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 134 |
| Conread position: | 1-816 |
| Cow position: | |
| Alignm length: | 860 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 30-222 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 41-584 |
| Cow position: | |
| Alignm length: | 574 |
| Alignm identity: | 368 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 92 |
| Conread position: | 262-645 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 283-732 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 311-650 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 92 |
| Conread position: | 312-642 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 78 |
| Conread position: | 315-518 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-525 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 315-572 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 87 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-610 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-614 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 315-643 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 79 |
| Conread position: | 316-645 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 317-475 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 317-490 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-541 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 317-567 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-581 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 317-626 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 58 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 74 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 80 |
| Conread position: | 318-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 319-638 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 113, 82 |
| Conread position: | 321-645 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 321-816 |
| Cow position: | |
| Alignm length: | 509 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 71 |
| Conread position: | 323-550 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 334-807 |
| Cow position: | |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 338-644 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 207, 44 |
| Conread position: | 338-644 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 245, 53 |
| Conread position: | 350-652 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 350-652 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 352-652 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 159, 51 |
| Conread position: | 357-548 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 357-618 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 359-645 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 359-652 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 202, 10 |
| Conread position: | 359-652 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 212, 45 |
| Conread position: | 365-652 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 366-661 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 369-662 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 374-721 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 386-815 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 396-652 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 404-645 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 409-650 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 419-607 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 440-585 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 452-581 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 466-621 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 485-810 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 78, 176 |
| Conread position: | 492-810 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 169 |
| Conread position: | 505-621 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.