Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 31-297 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 90-297 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 90-586 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 172-652 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 397, 308 |
| Conread position: | 242-652 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 297-574 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 311-626 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 313-625 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 313-643 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 80 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 313-730 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 87 |
| Conread position: | 314-478 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 315-499 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-539 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-546 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-650 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 26 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 315-720 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 155, 79 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 21 |
| Conread position: | 315-815 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 73 |
| Conread position: | 316-652 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 87 |
| Conread position: | 317-464 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 74 |
| Conread position: | 317-522 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-614 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 242, 51 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 163, 39 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 135, 76 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 73 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-721 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 504 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 502 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 77 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 318-529 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 318-614 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 318-816 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 80 |
| Conread position: | 319-586 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 58 |
| Conread position: | 321-626 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 322-732 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 134 |
| Conread position: | 324-615 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 324-645 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 325-510 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 329-567 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 329-585 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 329-647 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 331-582 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 334-567 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 335-521 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 336-643 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 336-645 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 52 |
| Conread position: | 336-811 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 66 |
| Conread position: | 338-643 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 50 |
| Conread position: | 338-645 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 148 |
| Conread position: | 340-652 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 350-645 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 367-652 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 396-652 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 399-652 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 411-645 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 430-619 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 492-800 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 501-816 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 7 |
Show alignments to all cow chromosomes.