Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-292 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 1-816 |
| Cow position: | |
| Alignm length: | 855 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 2-282 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 239-585 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 242-652 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 313-585 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 56 |
| Conread position: | 313-585 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 87 |
| Conread position: | 313-586 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 79 |
| Conread position: | 313-635 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-644 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 313-644 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 313-720 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 315-469 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-478 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 76 |
| Conread position: | 315-495 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 315-506 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 315-562 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 315-613 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 72 |
| Conread position: | 315-642 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 119, 21 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 24 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-647 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-647 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 315-648 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 315-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 87 |
| Conread position: | 315-651 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 315-659 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 259, 87 |
| Conread position: | 315-730 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 87 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 87 |
| Conread position: | 316-811 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 317-460 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-566 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 317-583 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 250, 19 |
| Conread position: | 317-585 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 317-592 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 81 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 19 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 317-721 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-732 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 63 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 319-584 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 319-645 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-815 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 321-492 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 82 |
| Conread position: | 321-662 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 236, 80 |
| Conread position: | 324-652 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 325-644 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 209, 51 |
| Conread position: | 325-721 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 107, 17 |
| Conread position: | 326-652 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 330-645 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 337-719 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 181, 63 |
| Conread position: | 340-645 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 341-652 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 351-721 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 119, 41 |
| Conread position: | 383-645 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 396-626 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 396-644 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 396-807 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 396-810 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 408-644 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 428-650 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 430-650 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 437-816 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 440-652 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 94, 40 |
| Conread position: | 441-652 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 465-816 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 475-585 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 479-651 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 169 |
| Conread position: | 484-652 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.