Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 1-586 |
| Cow position: | |
| Alignm length: | 615 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 2-301 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 31-275 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 31-298 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 31-319 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 129, 98 |
| Conread position: | 31-328 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 198 |
| Conread position: | 261-577 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 264-586 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 264-645 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 265-816 |
| Cow position: | |
| Alignm length: | 576 |
| Alignm identity: | 380 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 229 |
| Conread position: | 310-586 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 310-644 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 312-816 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 313-609 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 119, 91 |
| Conread position: | 313-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 75 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-811 |
| Cow position: | |
| Alignm length: | 520 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 315-586 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 207, 35 |
| Conread position: | 315-615 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-620 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 88 |
| Conread position: | 315-620 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 77 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 77 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-731 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 315-752 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 165, 86 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 316-755 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 317-537 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 317-576 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 317-583 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-619 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 317-643 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 317-646 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-730 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 317-760 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 201, 83 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 319-650 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 321-582 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 111, 81 |
| Conread position: | 329-652 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 235, 13 |
| Conread position: | 331-645 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 332-732 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 343-652 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 350-731 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 364-813 |
| Cow position: | |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 383-589 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 396-554 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 396-650 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 84 |
| Conread position: | 406-722 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 420-813 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 427-638 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 433-650 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 129, 47 |
| Conread position: | 436-652 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 459-816 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 461-652 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 464-650 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 504-645 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 505-652 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 505-652 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 49 |
Show alignments to all cow chromosomes.