Cow genome map

Conread name: Ss1.1-Spl1-SPL01C070055.5

Conread position: 1-277
Cow position:
Alignm length: 282
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 63

Conread position: 1-293
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 35

Conread position: 31-284
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 107

Conread position: 31-287
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 34

Conread position: 31-652
Cow position:
Alignm length: 648
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 105

Conread position: 42-645
Cow position:
Alignm length: 626
Alignm identity: 393
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 92

Conread position: 59-652
Cow position:
Alignm length: 628
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 90-644
Cow position:
Alignm length: 567
Alignm identity: 359
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 7

Conread position: 155-609
Cow position:
Alignm length: 472
Alignm identity: 321
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 65

Conread position: 267-582
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 19

Conread position: 310-721
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 92

Conread position: 311-644
Cow position:
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 311-764
Cow position:
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 25

Conread position: 313-644
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 172

Conread position: 313-651
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 313-652
Cow position:
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 37

Conread position: 313-652
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 90

Conread position: 313-652
Cow position:
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 78

Conread position: 313-652
Cow position:
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 89

Conread position: 313-810
Cow position:
Alignm length: 526
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 164

Conread position: 314-647
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 315-444
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 86

Conread position: 315-476
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 116, 33

Conread position: 315-491
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 78

Conread position: 315-531
Cow position:
Alignm length: 219
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 41

Conread position: 315-581
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 117, 79

Conread position: 315-587
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 117, 35

Conread position: 315-590
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 247, 59

Conread position: 315-620
Cow position:
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-636
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 75

Conread position: 315-637
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 158, 31

Conread position: 315-644
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 68

Conread position: 315-645
Cow position:
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 72

Conread position: 315-645
Cow position:
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 315-645
Cow position:
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-648
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 78

Conread position: 315-652
Cow position:
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position:
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-652
Cow position:
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 79

Conread position: 315-652
Cow position:
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 76

Conread position: 315-684
Cow position:
Alignm length: 389
Alignm identity: 265
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 88

Conread position: 315-720
Cow position:
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-732
Cow position:
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 88

Conread position: 315-732
Cow position:
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 87

Conread position: 315-732
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 78

Conread position: 315-732
Cow position:
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 77

Conread position: 315-796
Cow position:
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-801
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-816
Cow position:
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 73

Conread position: 315-816
Cow position:
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 35

Conread position: 315-816
Cow position:
Alignm length: 516
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 33

Conread position: 315-816
Cow position:
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 76

Conread position: 316-652
Cow position:
Alignm length: 344
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 75

Conread position: 317-533
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 115, 94

Conread position: 317-556
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 115, 76

Conread position: 317-585
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 24

Conread position: 317-586
Cow position:
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 317-601
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 35

Conread position: 317-601
Cow position:
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-621
Cow position:
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 317-644
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 109, 67

Conread position: 317-645
Cow position:
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-647
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 69

Conread position: 317-650
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 73

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-650
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 85

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-650
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 317-650
Cow position:
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 24

Conread position: 317-650
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 72

Conread position: 317-650
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 18

Conread position: 317-650
Cow position:
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 317-651
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-652
Cow position:
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 317-652
Cow position:
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 74

Conread position: 317-652
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-803
Cow position:
Alignm length: 502
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-807
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 61

Conread position: 317-807
Cow position:
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-816
Cow position:
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 44

Conread position: 318-499
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 84

Conread position: 319-518
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 113, 83

Conread position: 319-652
Cow position:
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 83

Conread position: 325-643
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 50

Conread position: 326-650
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 39

Conread position: 326-651
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 47

Conread position: 332-643
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 336-585
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 62

Conread position: 336-816
Cow position:
Alignm length: 485
Alignm identity: 310
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 49

Conread position: 347-644
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 27

Conread position: 351-811
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 51

Conread position: 356-732
Cow position:
Alignm length: 401
Alignm identity: 281
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 206, 38

Conread position: 364-652
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 30

Conread position: 395-586
Cow position:
Alignm length: 196
Alignm identity: 158
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 86

Conread position: 396-586
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 64

Conread position: 396-650
Cow position:
Alignm length: 265
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 396-815
Cow position:
Alignm length: 432
Alignm identity: 290
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 30, 85

Conread position: 397-644
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 84

Conread position: 397-816
Cow position:
Alignm length: 427
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 80

Conread position: 410-816
Cow position:
Alignm length: 421
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 72

Conread position: 411-728
Cow position:
Alignm length: 346
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 73

Conread position: 422-652
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 186, 10

Conread position: 422-810
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 59

Conread position: 442-645
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 21

Conread position: 446-652
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 34

Conread position: 480-645
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 113

Conread position: 481-652
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 51

Conread position: 500-652
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 151

Conread position: 501-730
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 240

Conread position: 526-645
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 88

Show alignments to all cow chromosomes.