Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 63-652 |
| Cow position: | |
| Alignm length: | 617 |
| Alignm identity: | 417 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 136-569 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 242-645 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 311-651 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 313-645 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 313-650 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 315-489 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 26 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-622 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 77 |
| Conread position: | 315-635 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 315-642 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 73 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 316-645 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 317-567 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 238, 76 |
| Conread position: | 317-616 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 244, 19 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 318-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 84 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 75 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 321-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 321-650 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 321-732 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 247, 72 |
| Conread position: | 324-647 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 326-574 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 327-816 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 333-652 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 335-585 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 358-645 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 393-645 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 396-645 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 410-816 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 416-816 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 447-719 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 484-816 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 81, 143 |
| Conread position: | 493-645 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.