Cow genome map

Conread name: Ss1.1-Spl1-SPL01C070055.5

Conread position: 63-652
Cow position: chr20:18315140-18314570 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 417
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 68

Conread position: 136-569
Cow position: chr20:22717070-22716651 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 40

Conread position: 242-645
Cow position: chr20:35105109-35105524 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 286
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 14

Conread position: 311-651
Cow position: chr20:18324745-18324415 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 44

Conread position: 313-645
Cow position: chr20:13763336-13763671 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 75

Conread position: 313-650
Cow position: chr20:19438364-19438691 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 69

Conread position: 313-652
Cow position: chr20:21914759-21915089 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 89

Conread position: 315-489
Cow position: chr20:7115053-7114885 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 116, 87

Conread position: 315-585
Cow position: chr20:2790472-2790211 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 43

Conread position: 315-585
Cow position: chr20:8003794-8003528 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 26

Conread position: 315-585
Cow position: chr20:25850558-25850296 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 76

Conread position: 315-622
Cow position: chr20:16179382-16179075 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 77

Conread position: 315-635
Cow position: chr20:28161202-28161525 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 88

Conread position: 315-642
Cow position: chr20:13679608-13679286 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 73

Conread position: 315-645
Cow position: chr20:12438327-12437997 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 78

Conread position: 315-645
Cow position: chr20:29948933-29949266 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 87

Conread position: 315-652
Cow position: chr20:5535369-5535704 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 87

Conread position: 315-652
Cow position: chr20:15097443-15097106 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 79

Conread position: 315-652
Cow position: chr20:23469232-23468893 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 315-652
Cow position: chr20:23799319-23799653 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 65

Conread position: 315-652
Cow position: chr20:28565160-28564820 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 79

Conread position: 315-816
Cow position: chr20:30684754-30685244 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 76

Conread position: 316-645
Cow position: chr20:18963363-18963051 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 70

Conread position: 317-567
Cow position: chr20:24371357-24371122 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 44

Conread position: 317-586
Cow position: chr20:3679142-3678886 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 238, 76

Conread position: 317-616
Cow position: chr20:42905641-42905936 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 76

Conread position: 317-644
Cow position: chr20:21394030-21394355 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 76

Conread position: 317-645
Cow position: chr20:823196-823522 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 317-645
Cow position: chr20:15292440-15292768 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 70

Conread position: 317-645
Cow position: chr20:22697704-22698025 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 244, 19

Conread position: 317-650
Cow position: chr20:25961532-25961868 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 85

Conread position: 317-650
Cow position: chr20:38351107-38351441 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 77

Conread position: 318-652
Cow position: chr20:35124932-35125265 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 84

Conread position: 319-652
Cow position: chr20:8215956-8216286 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 75

Conread position: 319-652
Cow position: chr20:27869636-27869973 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 321-586
Cow position: chr20:31377766-31377511 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 15

Conread position: 321-650
Cow position: chr20:8992784-8992453 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 82

Conread position: 321-732
Cow position: chr20:10854907-10854487 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 300
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 247, 72

Conread position: 324-647
Cow position: chr20:10840267-10839947 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 26

Conread position: 326-574
Cow position: chr20:20754041-20753808 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 32

Conread position: 327-816
Cow position: chr20:12568964-12569446 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 75

Conread position: 333-652
Cow position: chr20:8974365-8974049 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 335-585
Cow position: chr20:15065721-15065964 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 68

Conread position: 358-645
Cow position: chr20:14870473-14870185 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 74, 44

Conread position: 393-645
Cow position: chr20:13434085-13433826 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 90

Conread position: 396-645
Cow position: chr20:24616352-24616105 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 36, 85

Conread position: 410-816
Cow position: chr20:17661557-17661148 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 416-816
Cow position: chr20:19355306-19355689 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 61

Conread position: 447-719
Cow position: chr20:13664889-13664584 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 34

Conread position: 484-816
Cow position: chr20:37442712-37442371 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 81, 143

Conread position: 493-645
Cow position: chr20:7113586-7113425 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.