Cow genome map
Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
Conread position: | 63-652 |
Cow position: | chr20:18315140-18314570 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 417 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 26, 68 |
Conread position: | 136-569 |
Cow position: | chr20:22717070-22716651 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 293 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 91, 40 |
Conread position: | 242-645 |
Cow position: | chr20:35105109-35105524 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 286 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 24, 14 |
Conread position: | 311-651 |
Cow position: | chr20:18324745-18324415 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 232 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 36, 44 |
Conread position: | 313-645 |
Cow position: | chr20:13763336-13763671 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 75 |
Conread position: | 313-650 |
Cow position: | chr20:19438364-19438691 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 69 |
Conread position: | 313-652 |
Cow position: | chr20:21914759-21915089 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 89 |
Conread position: | 315-489 |
Cow position: | chr20:7115053-7114885 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 138 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 116, 87 |
Conread position: | 315-585 |
Cow position: | chr20:2790472-2790211 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 7, 43 |
Conread position: | 315-585 |
Cow position: | chr20:8003794-8003528 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 26 |
Conread position: | 315-585 |
Cow position: | chr20:25850558-25850296 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 206 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-622 |
Cow position: | chr20:16179382-16179075 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 77 |
Conread position: | 315-635 |
Cow position: | chr20:28161202-28161525 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 88 |
Conread position: | 315-642 |
Cow position: | chr20:13679608-13679286 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 73 |
Conread position: | 315-645 |
Cow position: | chr20:12438327-12437997 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 78 |
Conread position: | 315-645 |
Cow position: | chr20:29948933-29949266 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 87 |
Conread position: | 315-652 |
Cow position: | chr20:5535369-5535704 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 87 |
Conread position: | 315-652 |
Cow position: | chr20:15097443-15097106 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 79 |
Conread position: | 315-652 |
Cow position: | chr20:23469232-23468893 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 315-652 |
Cow position: | chr20:23799319-23799653 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 65 |
Conread position: | 315-652 |
Cow position: | chr20:28565160-28564820 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 79 |
Conread position: | 315-816 |
Cow position: | chr20:30684754-30685244 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 76 |
Conread position: | 316-645 |
Cow position: | chr20:18963363-18963051 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 218 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 111, 70 |
Conread position: | 317-567 |
Cow position: | chr20:24371357-24371122 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 115, 44 |
Conread position: | 317-586 |
Cow position: | chr20:3679142-3678886 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 179 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 238, 76 |
Conread position: | 317-616 |
Cow position: | chr20:42905641-42905936 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 76 |
Conread position: | 317-644 |
Cow position: | chr20:21394030-21394355 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 76 |
Conread position: | 317-645 |
Cow position: | chr20:823196-823522 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 85 |
Conread position: | 317-645 |
Cow position: | chr20:15292440-15292768 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 70 |
Conread position: | 317-645 |
Cow position: | chr20:22697704-22698025 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 243 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 244, 19 |
Conread position: | 317-650 |
Cow position: | chr20:25961532-25961868 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 85 |
Conread position: | 317-650 |
Cow position: | chr20:38351107-38351441 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 77 |
Conread position: | 318-652 |
Cow position: | chr20:35124932-35125265 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 84 |
Conread position: | 319-652 |
Cow position: | chr20:8215956-8216286 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 75 |
Conread position: | 319-652 |
Cow position: | chr20:27869636-27869973 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 85 |
Conread position: | 321-586 |
Cow position: | chr20:31377766-31377511 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 200 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 127, 15 |
Conread position: | 321-650 |
Cow position: | chr20:8992784-8992453 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 321-732 |
Cow position: | chr20:10854907-10854487 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 300 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 247, 72 |
Conread position: | 324-647 |
Cow position: | chr20:10840267-10839947 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 326-574 |
Cow position: | chr20:20754041-20753808 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 32 |
Conread position: | 327-816 |
Cow position: | chr20:12568964-12569446 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 75 |
Conread position: | 333-652 |
Cow position: | chr20:8974365-8974049 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 56 |
Conread position: | 335-585 |
Cow position: | chr20:15065721-15065964 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 95, 68 |
Conread position: | 358-645 |
Cow position: | chr20:14870473-14870185 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 215 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 74, 44 |
Conread position: | 393-645 |
Cow position: | chr20:13434085-13433826 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 17, 90 |
Conread position: | 396-645 |
Cow position: | chr20:24616352-24616105 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 36, 85 |
Conread position: | 410-816 |
Cow position: | chr20:17661557-17661148 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 71 |
Conread position: | 416-816 |
Cow position: | chr20:19355306-19355689 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 268 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 16, 61 |
Conread position: | 447-719 |
Cow position: | chr20:13664889-13664584 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 218 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 87, 34 |
Conread position: | 484-816 |
Cow position: | chr20:37442712-37442371 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 239 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 81, 143 |
Conread position: | 493-645 |
Cow position: | chr20:7113586-7113425 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.