Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 31-292 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 242-626 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 311-548 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 121, 80 |
| Conread position: | 313-559 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 313-586 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 313-587 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 122, 8 |
| Conread position: | 313-644 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 313-650 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 315-575 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 87 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-586 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-620 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 315-636 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 76 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 155, 77 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 87 |
| Conread position: | 315-646 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 315-646 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 86 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 316-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 317-567 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 317-584 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 317-584 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 72 |
| Conread position: | 317-626 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-640 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 317-653 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 317-811 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 77 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 83 |
| Conread position: | 321-645 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 112, 8 |
| Conread position: | 324-652 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 70 |
| Conread position: | 327-525 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 329-652 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 341-652 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 61 |
| Conread position: | 358-585 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 386-816 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 409-645 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 440-652 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 441-652 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 193, 35 |
| Conread position: | 446-810 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 30 |
| Conread position: | 456-650 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 132, 24 |
| Conread position: | 458-614 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 472-644 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 8 |
Show alignments to all cow chromosomes.