Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-311 |
| Cow position: | chr3:52864176-52863868 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1-601 |
| Cow position: | chr3:6879053-6878485 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 19-539 |
| Cow position: | chr3:46015635-46016158 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 31-297 |
| Cow position: | chr3:64357849-64357586 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 31-297 |
| Cow position: | chr3:66991082-66991348 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 192 |
| Conread position: | 31-442 |
| Cow position: | chr3:24591326-24590898 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 35-816 |
| Cow position: | chr3:2907763-2906976 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 90-346 |
| Cow position: | chr3:6685858-6686116 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 90-499 |
| Cow position: | chr3:4027830-4028222 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 134-585 |
| Cow position: | chr3:18356390-18355933 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 242-645 |
| Cow position: | chr3:78027206-78026786 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 252-650 |
| Cow position: | chr3:51242609-51243009 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 151 |
| Conread position: | 271-816 |
| Cow position: | chr3:65583006-65582476 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 292, 29 |
| Conread position: | 288-652 |
| Cow position: | chr3:2710589-2710230 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 295-816 |
| Cow position: | chr3:50127370-50126839 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 308-652 |
| Cow position: | chr3:66890669-66890325 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 94 |
| Conread position: | 311-490 |
| Cow position: | chr3:77424108-77424283 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 120, 82 |
| Conread position: | 311-581 |
| Cow position: | chr3:3982051-3982306 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 311-586 |
| Cow position: | chr3:18575897-18575633 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 155 |
| Conread position: | 313-466 |
| Cow position: | chr3:74439602-74439750 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 118, 81 |
| Conread position: | 313-477 |
| Cow position: | chr3:45238077-45237919 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 313-645 |
| Cow position: | chr3:42052848-42052512 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 313-651 |
| Cow position: | chr3:52654564-52654241 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 313-652 |
| Cow position: | chr3:42432538-42432860 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 313-741 |
| Cow position: | chr3:45774107-45773651 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 313-814 |
| Cow position: | chr3:29578932-29579418 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 313-815 |
| Cow position: | chr3:45895253-45894757 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 172 |
| Conread position: | 313-816 |
| Cow position: | chr3:45974802-45975297 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 313-816 |
| Cow position: | chr3:46502839-46503341 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-816 |
| Cow position: | chr3:56340121-56339624 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-816 |
| Cow position: | chr3:72630374-72630870 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 314-652 |
| Cow position: | chr3:49678098-49678441 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 88 |
| Conread position: | 315-565 |
| Cow position: | chr3:36881613-36881367 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 315-568 |
| Cow position: | chr3:5995394-5995150 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 80 |
| Conread position: | 315-574 |
| Cow position: | chr3:82933101-82933357 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 195, 108 |
| Conread position: | 315-585 |
| Cow position: | chr3:15179006-15179267 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-620 |
| Cow position: | chr3:18542100-18541796 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 315-640 |
| Cow position: | chr3:57484422-57484097 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-641 |
| Cow position: | chr3:77443662-77443977 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 78 |
| Conread position: | 315-643 |
| Cow position: | chr3:52863829-52863500 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 315-644 |
| Cow position: | chr3:5953879-5953548 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 76 |
| Conread position: | 315-644 |
| Cow position: | chr3:49544903-49544576 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 315-645 |
| Cow position: | chr3:7480925-7480597 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 315-646 |
| Cow position: | chr3:50915633-50915966 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 78 |
| Conread position: | 315-647 |
| Cow position: | chr3:594884-595211 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-651 |
| Cow position: | chr3:18463266-18462930 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 89 |
| Conread position: | 315-652 |
| Cow position: | chr3:6686115-6686448 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 315-652 |
| Cow position: | chr3:10239961-10240299 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 79 |
| Conread position: | 315-652 |
| Cow position: | chr3:18811807-18812147 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 315-652 |
| Cow position: | chr3:19756651-19756310 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 315-652 |
| Cow position: | chr3:21182380-21182054 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-652 |
| Cow position: | chr3:40823694-40824030 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 315-652 |
| Cow position: | chr3:53515913-53516252 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-661 |
| Cow position: | chr3:49137231-49136891 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 26 |
| Conread position: | 315-728 |
| Cow position: | chr3:34030591-34030167 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-732 |
| Cow position: | chr3:23213770-23213337 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-816 |
| Cow position: | chr3:5883845-5884338 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 315-816 |
| Cow position: | chr3:59861673-59862167 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-816 |
| Cow position: | chr3:66620480-66620978 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 315-816 |
| Cow position: | chr3:75040862-75040366 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 78 |
| Conread position: | 316-561 |
| Cow position: | chr3:51940117-51939885 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 316-645 |
| Cow position: | chr3:30314861-30315195 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 317-476 |
| Cow position: | chr3:7169095-7169250 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 317-503 |
| Cow position: | chr3:54341950-54341775 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 317-540 |
| Cow position: | chr3:60208302-60208086 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 114, 84 |
| Conread position: | 317-567 |
| Cow position: | chr3:48842474-48842714 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-586 |
| Cow position: | chr3:1516458-1516724 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 317-613 |
| Cow position: | chr3:49613674-49613379 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 317-619 |
| Cow position: | chr3:68873452-68873147 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 317-644 |
| Cow position: | chr3:32841716-32841388 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 317-650 |
| Cow position: | chr3:7158413-7158088 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | chr3:19939182-19939529 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 84 |
| Conread position: | 317-650 |
| Cow position: | chr3:22336191-22336527 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 317-650 |
| Cow position: | chr3:29330968-29330645 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-650 |
| Cow position: | chr3:47081108-47080775 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | chr3:64027783-64027447 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:6782687-6783011 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 317-652 |
| Cow position: | chr3:14439458-14439125 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:18859716-18860051 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 317-652 |
| Cow position: | chr3:19878960-19879293 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 317-652 |
| Cow position: | chr3:20380846-20381181 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:23290033-23289695 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 317-652 |
| Cow position: | chr3:32622734-32622404 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:36117965-36118302 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:37969350-37969683 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 81 |
| Conread position: | 317-652 |
| Cow position: | chr3:41211432-41211095 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 317-652 |
| Cow position: | chr3:45033043-45033386 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 85 |
| Conread position: | 317-652 |
| Cow position: | chr3:46861000-46860663 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 317-652 |
| Cow position: | chr3:64017059-64016722 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 49 |
| Conread position: | 317-652 |
| Cow position: | chr3:64650929-64651267 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 317-652 |
| Cow position: | chr3:68699669-68699325 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 317-721 |
| Cow position: | chr3:27918738-27919153 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 85 |
| Conread position: | 317-732 |
| Cow position: | chr3:48230153-48229733 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 317-755 |
| Cow position: | chr3:43415459-43415893 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 290 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 317-807 |
| Cow position: | chr3:3523324-3523808 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 82 |
| Conread position: | 317-810 |
| Cow position: | chr3:2917763-2918251 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | chr3:19736883-19737371 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-810 |
| Cow position: | chr3:24314770-24315257 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | chr3:46679734-46680218 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 74 |
| Conread position: | 318-567 |
| Cow position: | chr3:31415847-31416078 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 320-652 |
| Cow position: | chr3:40339806-40339474 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 321-567 |
| Cow position: | chr3:12679709-12679470 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 321-611 |
| Cow position: | chr3:50011983-50012269 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 321-644 |
| Cow position: | chr3:4737666-4737343 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 321-645 |
| Cow position: | chr3:37625282-37625602 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 321-645 |
| Cow position: | chr3:42995372-42995041 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 323-721 |
| Cow position: | chr3:83232921-83232512 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 324-811 |
| Cow position: | chr3:47177966-47177483 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 324-816 |
| Cow position: | chr3:58947942-58948410 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 33 |
| Conread position: | 325-611 |
| Cow position: | chr3:42631739-42632021 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 325-816 |
| Cow position: | chr3:63003231-63002749 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 334-511 |
| Cow position: | chr3:19721839-19721668 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 69 |
| Conread position: | 335-549 |
| Cow position: | chr3:3055001-3055198 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 336-645 |
| Cow position: | chr3:37953652-37953346 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 224, 57 |
| Conread position: | 336-652 |
| Cow position: | chr3:52861811-52862115 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 57 |
| Conread position: | 337-621 |
| Cow position: | chr3:4286121-4286408 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 65 |
| Conread position: | 338-645 |
| Cow position: | chr3:24643516-24643816 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 353-733 |
| Cow position: | chr3:83294547-83294170 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 364-524 |
| Cow position: | chr3:56322020-56322174 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 364-622 |
| Cow position: | chr3:48059079-48058817 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 364-644 |
| Cow position: | chr3:19944607-19944864 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 383-644 |
| Cow position: | chr3:70887509-70887765 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 205, 93 |
| Conread position: | 395-815 |
| Cow position: | chr3:38493629-38494029 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 396-645 |
| Cow position: | chr3:20870329-20870074 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 401-652 |
| Cow position: | chr3:64357406-64357151 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 410-643 |
| Cow position: | chr3:19890208-19889968 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 440-652 |
| Cow position: | chr3:19800757-19800537 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 440-787 |
| Cow position: | chr3:24589581-24589242 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 142, 15 |
| Conread position: | 464-650 |
| Cow position: | chr3:7169657-7169845 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 467-652 |
| Cow position: | chr3:7247128-7247315 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 480-650 |
| Cow position: | chr3:13967551-13967372 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 485-585 |
| Cow position: | chr3:34844304-34844407 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 486-816 |
| Cow position: | chr3:42447570-42447902 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 177 |
| Conread position: | 498-652 |
| Cow position: | chr3:4028365-4028525 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 30 |
Show alignments to all cow chromosomes.