Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 31-298 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 104 |
| Conread position: | 291-586 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 296-645 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 308-719 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 309-637 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 123, 55 |
| Conread position: | 313-790 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 315-460 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 315-476 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 315-586 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 315-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 315-711 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 74 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 317-466 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-472 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-551 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-567 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-621 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 229, 68 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 86 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 74 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 231, 39 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-659 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 317-667 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-721 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 317-800 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 333 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 319-621 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-661 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 83 |
| Conread position: | 321-650 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 321-815 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 90 |
| Conread position: | 329-652 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 28 |
| Conread position: | 334-566 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 336-616 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 336-644 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 336-652 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 55 |
| Conread position: | 337-644 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 342-645 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 350-645 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 350-652 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 352-652 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 50 |
| Conread position: | 353-647 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 356-645 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 364-816 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 365-650 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 367-523 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 383-645 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 396-652 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 396-800 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 401-810 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 409-556 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 410-651 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 428-645 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 134, 5 |
| Conread position: | 434-810 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 129, 46 |
| Conread position: | 440-650 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 451-810 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 111, 29 |
| Conread position: | 464-620 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 470-813 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 501-816 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 507-721 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 74, 117 |
Show alignments to all cow chromosomes.