Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-652 |
| Cow position: | |
| Alignm length: | 701 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 242-644 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 242-652 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 310-652 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 311-650 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 311-653 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 91 |
| Conread position: | 313-491 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 313-585 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 313-619 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 89 |
| Conread position: | 313-645 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 313-651 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 63 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 75 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 313-816 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 314-816 |
| Cow position: | |
| Alignm length: | 511 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 83 |
| Conread position: | 315-495 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-533 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-539 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-567 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 315-643 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 315-648 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 7 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-731 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 87 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 316-541 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 316-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 86 |
| Conread position: | 317-528 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 317-561 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 72 |
| Conread position: | 317-601 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-642 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 75 |
| Conread position: | 317-647 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 64 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 71 |
| Conread position: | 318-728 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 320-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 82 |
| Conread position: | 321-579 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 321-622 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 323-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 325-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 329-583 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 329-652 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 73 |
| Conread position: | 331-615 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 333-650 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 334-644 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 334-645 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 336-586 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 336-587 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 336-642 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 336-816 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 350-525 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 353-816 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 362-644 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 364-645 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 396-619 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 396-721 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 396-800 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 170, 84 |
| Conread position: | 397-644 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 410-652 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 168, 70 |
| Conread position: | 430-652 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 433-644 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 434-810 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 42 |
| Conread position: | 441-617 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 444-807 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 452-650 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 456-650 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 494-645 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 495-652 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 518-650 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 520-816 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 8 |
Show alignments to all cow chromosomes.