Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 2-297 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 31-297 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 31-582 |
| Cow position: | |
| Alignm length: | 574 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 53-297 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 134-566 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 136-743 |
| Cow position: | |
| Alignm length: | 631 |
| Alignm identity: | 415 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 295-645 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 310-650 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 92 |
| Conread position: | 311-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 313-626 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 313-643 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 265, 79 |
| Conread position: | 313-645 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 78 |
| Conread position: | 313-816 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 314-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 315-502 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 117, 69 |
| Conread position: | 315-515 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 315-567 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 123, 26 |
| Conread position: | 315-567 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 87 |
| Conread position: | 315-608 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 271, 49 |
| Conread position: | 315-620 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-638 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 75 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 84 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-815 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 316-577 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 317-467 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 317-478 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-503 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 109, 17 |
| Conread position: | 317-560 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 317-585 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 317-609 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 318-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 108, 84 |
| Conread position: | 318-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 84 |
| Conread position: | 318-816 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 337 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 114, 18 |
| Conread position: | 319-585 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 113, 72 |
| Conread position: | 319-650 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 321-650 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 81 |
| Conread position: | 322-528 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 322-635 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 322-643 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 244, 37 |
| Conread position: | 323-505 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 323-661 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 75 |
| Conread position: | 323-732 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 66 |
| Conread position: | 326-800 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 329-645 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 332-652 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 336-585 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 336-645 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 220, 21 |
| Conread position: | 336-816 |
| Cow position: | |
| Alignm length: | 497 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 22 |
| Conread position: | 337-650 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 351-732 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 356-586 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 359-644 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 195, 44 |
| Conread position: | 372-652 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 394-645 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 396-650 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 396-650 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 398-644 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 416-614 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 441-626 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 451-645 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 459-583 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 474-652 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 484-650 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 519-652 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 125 |
Show alignments to all cow chromosomes.