Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 1-221 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 1-621 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 31-292 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 31-649 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 32-346 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 266-644 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 313-461 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 313-644 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 313-735 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 314-526 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 315-495 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-585 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 248, 33 |
| Conread position: | 315-615 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 30 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 103 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 77 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 315-659 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-721 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 74 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 87 |
| Conread position: | 315-811 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 79 |
| Conread position: | 316-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 248, 72 |
| Conread position: | 316-651 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 316-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 317-456 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 317-493 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-499 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 317-638 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 107, 74 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 317-647 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 33 |
| Conread position: | 317-647 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 244, 39 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-651 |
| Cow position: | |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 74 |
| Conread position: | 317-653 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 317-661 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 84 |
| Conread position: | 317-686 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 506 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-816 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 318-585 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 318-650 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 319-565 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 113, 48 |
| Conread position: | 319-644 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 319-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-650 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 319-816 |
| Cow position: | |
| Alignm length: | 505 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 83 |
| Conread position: | 321-586 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 321-626 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 324-643 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 324-810 |
| Cow position: | |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 78 |
| Conread position: | 325-586 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 77 |
| Conread position: | 326-644 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 76 |
| Conread position: | 326-650 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 329-528 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 329-652 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 65 |
| Conread position: | 330-650 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 336-586 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 336-645 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 337-585 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 349-652 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 7 |
| Conread position: | 360-651 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 394-644 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 157, 25 |
| Conread position: | 396-557 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 396-626 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 400-816 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 409-644 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 410-816 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 425-645 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 440-650 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 477-767 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 165 |
| Conread position: | 496-652 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.