Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C070055.5 |
| Conread position: | 31-295 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 41-297 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 47-297 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 90-292 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 95-352 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 177-644 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 241-645 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 60, 130 |
| Conread position: | 242-652 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 289-816 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 360 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 311-650 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 311-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 276, 90 |
| Conread position: | 313-614 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 313-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 89 |
| Conread position: | 315-489 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-519 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 41 |
| Conread position: | 315-567 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 315-568 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 315-606 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 315-613 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 315-619 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 315-630 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 315-642 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 79 |
| Conread position: | 315-644 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 78 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 78 |
| Conread position: | 315-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 77 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 79 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 315-652 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 315-730 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 315-732 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 315-816 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 316-645 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 316-732 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 317-472 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-476 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 317-523 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 317-567 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 64 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-586 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 317-618 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 317-640 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 317-644 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 317-645 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 85 |
| Conread position: | 317-647 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 67 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-650 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 317-652 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 317-807 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 85 |
| Conread position: | 317-810 |
| Cow position: | |
| Alignm length: | 507 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 319-652 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 83 |
| Conread position: | 321-586 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 81 |
| Conread position: | 321-615 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 68 |
| Conread position: | 323-644 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 109, 71 |
| Conread position: | 323-645 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 325-816 |
| Cow position: | |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 20 |
| Conread position: | 326-652 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 329-643 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 331-651 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 338-587 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 338-644 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 338-652 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 339-652 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 342-643 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 350-652 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 352-645 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 353-643 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 356-652 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 359-586 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 383-737 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 401-635 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 411-816 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 278 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 423-652 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 433-785 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 129, 47 |
| Conread position: | 464-620 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 479-645 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 483-608 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.