Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01C110069.5 |
| Conread position: | 47-171 |
| Cow position: | chr12:39381509-39381385 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-294 |
| Cow position: | chr12:39381291-39381171 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 260-435 |
| Cow position: | chr12:39381122-39380947 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-653 |
| Cow position: | chr12:39379196-39378977 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 732-871 |
| Cow position: | chr12:39376219-39376080 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 130 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 874-995 |
| Cow position: | chr12:39375980-39375859 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 117 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 993-1090 |
| Cow position: | chr12:39373848-39373751 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1093-1263 |
| Cow position: | chr12:39372577-39372407 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1262-1379 |
| Cow position: | chr12:39371490-39371373 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1430-1554 |
| Cow position: | chr12:39370195-39370071 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 123 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1555-1774 |
| Cow position: | chr12:39369219-39369000 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1773-2003 |
| Cow position: | chr12:39368419-39368189 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2002-2145 |
| Cow position: | chr12:39366969-39366826 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2144-3336 |
| Cow position: | chr12:39366231-39365016 (view UCSC Genome Browser custom track) |
| Alignm length: | 1228 |
| Alignm identity: | 1060 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 169 |
Show alignments to all cow chromosomes.