Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01D070072.5 |
| Conread position: | 3-113 |
| Cow position: | chr23:21181166-21181056 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-113 |
| Cow position: | chr23:23049906-23049799 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-382 |
| Cow position: | chr23:23096967-23096696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 115-382 |
| Cow position: | chr23:20551142-20551409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-382 |
| Cow position: | chr23:21180741-21180474 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-382 |
| Cow position: | chr23:23022929-23022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 195 |
| Conread position: | 115-382 |
| Cow position: | chr23:23049471-23049204 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 189 |
| Conread position: | 116-397 |
| Cow position: | chr23:23177852-23177569 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 373-657 |
| Cow position: | chr23:21180287-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-657 |
| Cow position: | chr23:23022459-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 114 |
| Conread position: | 373-657 |
| Cow position: | chr23:23049041-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 209 |
| Conread position: | 373-657 |
| Cow position: | chr23:23096509-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 374-657 |
| Cow position: | chr23:20551600-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 374-657 |
| Cow position: | chr23:23177323-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 440-657 |
| Cow position: | chr23:24589535-24589754 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 655-780 |
| Cow position: | chr23:20553184-20553309 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:21000454-21000579 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:21179119-21178994 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:23021253-23021128 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:23048188-23048063 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:23093772-23093647 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-780 |
| Cow position: | chr23:23176142-23176017 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 656-780 |
| Cow position: | chr23:24591581-24591702 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.