• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL01D110084.5
        

               
Conread position:
               
6-327
               

               
Cow position:
               
chr28:13607679-13608013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr28:16416434-16416725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
16-429
               

               
Cow position:
               
chr28:13245349-13245795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
20-225
               

               
Cow position:
               
chr28:118253-118033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
23-376
               

               
Cow position:
               
chr28:30937861-30937505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
25-421
               

               
Cow position:
               
chr28:6091167-6091576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
27-258
               

               
Cow position:
               
chr28:22279383-22279150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
27-403
               

               
Cow position:
               
chr28:21046749-21046388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr28:616202-616591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
28-225
               

               
Cow position:
               
chr28:19023943-19024162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
28-362
               

               
Cow position:
               
chr28:15044048-15043713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
31-242
               

               
Cow position:
               
chr28:28903852-28903629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr28:3914523-3914896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr28:16204519-16204139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
31-432
               

               
Cow position:
               
chr28:11866856-11866438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
32-230
               

               
Cow position:
               
chr28:28076593-28076397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr28:22338818-22339035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr28:25070931-25071188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
32-283
               

               
Cow position:
               
chr28:11818146-11817892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
32-341
               

               
Cow position:
               
chr28:6971525-6971209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
32-343
               

               
Cow position:
               
chr28:5771184-5771505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
32-386
               

               
Cow position:
               
chr28:18139637-18139288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr28:5437277-5436888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr28:26151835-26152209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
32-405
               

               
Cow position:
               
chr28:23410509-23410131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
32-411
               

               
Cow position:
               
chr28:30293775-30293377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr28:9176938-9176678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
33-341
               

               
Cow position:
               
chr28:2752685-2752353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
33-393
               

               
Cow position:
               
chr28:11759722-11759370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr28:19054832-19055234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
34-139
               

               
Cow position:
               
chr28:13371352-13371250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-140
               

               
Cow position:
               
chr28:16450883-16450779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
34-173
               

               
Cow position:
               
chr28:11827310-11827451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 47
               

               
Conread position:
               
34-176
               

               
Cow position:
               
chr28:3077809-3077955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr28:7980602-7980436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr28:3105055-3105242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
34-211
               

               
Cow position:
               
chr28:2905397-2905578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr28:19394447-19394629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
34-219
               

               
Cow position:
               
chr28:9390548-9390352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
34-219
               

               
Cow position:
               
chr28:26784650-26784452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr28:7590365-7590169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr28:22170901-22170697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chr28:17029899-17029703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr28:4022199-4022405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr28:5773456-5773653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr28:6307706-6307909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr28:10478526-10478326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
34-230
               

               
Cow position:
               
chr28:12048883-12048687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr28:26269148-26269360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
34-243
               

               
Cow position:
               
chr28:25459342-25459569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
34-248
               

               
Cow position:
               
chr28:17288041-17288256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr28:16243942-16243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr28:16253041-16252815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
34-253
               

               
Cow position:
               
chr28:19222781-19222554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
34-258
               

               
Cow position:
               
chr28:3714618-3714851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
34-260
               

               
Cow position:
               
chr28:18717305-18717078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
34-263
               

               
Cow position:
               
chr28:4057802-4058037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr28:7751484-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
34-274
               

               
Cow position:
               
chr28:4587912-4588163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr28:12758692-12758433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr28:7549246-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr28:5128913-5128655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr28:14649165-14649420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr28:7228569-7228307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr28:31110189-31109923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr28:14234789-14235034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr28:23675960-23676220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr28:10682002-10681742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr28:21380691-21380964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
34-292
               

               
Cow position:
               
chr28:16686849-16687110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr28:4841579-4841299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr28:13267598-13267881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-300
               

               
Cow position:
               
chr28:11786892-11786625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr28:21598437-21598159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr28:31987418-31987714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
34-317
               

               
Cow position:
               
chr28:14933778-14934074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr28:2862678-2862983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr28:13865662-13865960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr28:26922548-26922245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
34-325
               

               
Cow position:
               
chr28:8408555-8408849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr28:21355041-21355363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr28:25596449-25596760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr28:33051837-33052168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr28:22321238-22321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
34-339
               

               
Cow position:
               
chr28:19080031-19079706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr28:20313091-20313415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 301
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr28:7684862-7684563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr28:10999852-10999538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr28:16109761-16110078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
34-347
               

               
Cow position:
               
chr28:26684929-26685255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
34-349
               

               
Cow position:
               
chr28:25249172-25249502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
34-370
               

               
Cow position:
               
chr28:6059656-6059295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-370
               

               
Cow position:
               
chr28:23793486-23793144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
34-370
               

               
Cow position:
               
chr28:31648890-31649239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr28:26103532-26103868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
34-374
               

               
Cow position:
               
chr28:4881428-4881072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 174
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr28:16386689-16386349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr28:4809610-4809948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr28:11884706-11884354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr28:12598162-12598510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr28:16085141-16085489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr28:30303379-30303033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
34-379
               

               
Cow position:
               
chr28:2898812-2899174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 157
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr28:21844772-21845132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr28:10745026-10745399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr28:15272444-15272086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:4914285-4913907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:5144705-5144329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:5236786-5236410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:5684526-5684885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:5826765-5827116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:12964393-12964767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:16346710-16346353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:23724639-23724284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr28:26982930-26982551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 336
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr28:18625039-18625423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-390
               

               
Cow position:
               
chr28:11585391-11585022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
32, 279
               

               
Conread position:
               
34-390
               

               
Cow position:
               
chr28:25727194-25727560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr28:5188585-5188240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
240, 68
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:3024095-3023725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:3746018-3746388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:4090228-4089868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:4835029-4834652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:5817663-5818029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:8787363-8787730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:11426729-11426357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:12430426-12430797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:12951249-12951607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:14997878-14998255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:18790827-18791225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:18934272-18934626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:24966209-24966577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:29416900-29416534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr28:34230046-34230422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr28:26743438-26743824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:3078861-3078498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:3144075-3143687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:3492967-3492589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:9099752-9100126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:9285561-9285179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:10669391-10669785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:10844935-10845300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:21868268-21868655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 304
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:22132743-22133106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:23007909-23007544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:24996772-24996420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:25056789-25057154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr28:33163651-33163278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
34-402
               

               
Cow position:
               
chr28:23459961-23460344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 146
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr28:4070785-4071159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr28:5074688-5074320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr28:16919345-16918973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
34-404
               

               
Cow position:
               
chr28:22345835-22346224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
34-404
               

               
Cow position:
               
chr28:22500668-22500304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
144, 52
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr28:5931170-5931547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr28:13474122-13474502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
34-413
               

               
Cow position:
               
chr28:19222329-19221936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
34-413
               

               
Cow position:
               
chr28:28766093-28765692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 373
               

               
Conread position:
               
34-415
               

               
Cow position:
               
chr28:22323082-22323472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
34-419
               

               
Cow position:
               
chr28:4884450-4884036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
34-419
               

               
Cow position:
               
chr28:26614703-26615070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr28:17638050-17637639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr28:34878156-34877753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 213
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr28:21502211-21502609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr28:27218137-27218549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-425
               

               
Cow position:
               
chr28:33884224-33884626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr28:7698166-7697754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
34-428
               

               
Cow position:
               
chr28:8347551-8347960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
34-428
               

               
Cow position:
               
chr28:31841523-31841122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
34-430
               

               
Cow position:
               
chr28:751041-751453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
34-430
               

               
Cow position:
               
chr28:15263908-15263488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 242
               

               
Conread position:
               
34-430
               

               
Cow position:
               
chr28:21104031-21103591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 239
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr28:18354501-18354241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
35-332
               

               
Cow position:
               
chr28:29434607-29434296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
35-351
               

               
Cow position:
               
chr28:28163909-28164234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
35-363
               

               
Cow position:
               
chr28:26533360-26533706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
35-404
               

               
Cow position:
               
chr28:7512774-7512378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
36-191
               

               
Cow position:
               
chr28:2124249-2124410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
36-247
               

               
Cow position:
               
chr28:17316677-17316904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
36-292
               

               
Cow position:
               
chr28:5792522-5792792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr28:13176860-13176573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
36-319
               

               
Cow position:
               
chr28:10529664-10529383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 159
               

               
Conread position:
               
36-330
               

               
Cow position:
               
chr28:11752326-11752009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr28:3408399-3408053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
36-375
               

               
Cow position:
               
chr28:5204018-5204362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr28:4138851-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr28:11451648-11451314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
36-400
               

               
Cow position:
               
chr28:4282673-4282291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
36-428
               

               
Cow position:
               
chr28:10616133-10615724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
36-446
               

               
Cow position:
               
chr28:10053517-10053085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 314
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr28:15601081-15601465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 232
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr28:25701042-25700679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
37-424
               

               
Cow position:
               
chr28:14657520-14657939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
38-315
               

               
Cow position:
               
chr28:25283024-25283300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
38-332
               

               
Cow position:
               
chr28:2961011-2960697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
38-336
               

               
Cow position:
               
chr28:2132102-2131788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
38-350
               

               
Cow position:
               
chr28:21570010-21570327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr28:4016360-4016704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
38-393
               

               
Cow position:
               
chr28:16370254-16369898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
38-400
               

               
Cow position:
               
chr28:9740291-9740656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
39-216
               

               
Cow position:
               
chr28:8656919-8656738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr28:22739619-22739816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
39-341
               

               
Cow position:
               
chr28:19026184-19025864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
39-408
               

               
Cow position:
               
chr28:7268118-7267743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
40-370
               

               
Cow position:
               
chr28:25728028-25728358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
40-377
               

               
Cow position:
               
chr28:23530687-23531040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
40-400
               

               
Cow position:
               
chr28:26340159-26340532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 149
               

               
Conread position:
               
40-404
               

               
Cow position:
               
chr28:5273611-5273225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
40-415
               

               
Cow position:
               
chr28:22308472-22308857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr28:20409216-20409576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
42-139
               

               
Cow position:
               
chr28:26264628-26264729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
42-249
               

               
Cow position:
               
chr28:9928455-9928250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
42-289
               

               
Cow position:
               
chr28:17235904-17235655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
42-388
               

               
Cow position:
               
chr28:24368115-24367757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 149
               

               
Conread position:
               
42-400
               

               
Cow position:
               
chr28:14720953-14720586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
42-400
               

               
Cow position:
               
chr28:26719181-26719528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr28:25762852-25763172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 147
               

               
Conread position:
               
43-400
               

               
Cow position:
               
chr28:4158781-4159162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
43-403
               

               
Cow position:
               
chr28:4643939-4643569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
44-419
               

               
Cow position:
               
chr28:11829111-11828742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
44-450
               

               
Cow position:
               
chr28:14151061-14151475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
45-335
               

               
Cow position:
               
chr28:32174466-32174764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
45-377
               

               
Cow position:
               
chr28:21363574-21363917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
47-388
               

               
Cow position:
               
chr28:34442929-34442571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
48-290
               

               
Cow position:
               
chr28:32365675-32365926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
48-400
               

               
Cow position:
               
chr28:9426520-9426154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
48-400
               

               
Cow position:
               
chr28:33036636-33036287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
51-393
               

               
Cow position:
               
chr28:13527037-13527389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
51-402
               

               
Cow position:
               
chr28:5224550-5224904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
51-407
               

               
Cow position:
               
chr28:24672103-24672473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
52-246
               

               
Cow position:
               
chr28:15007996-15008201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr28:4098677-4098946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
52-388
               

               
Cow position:
               
chr28:661948-662285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr28:8291270-8291611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr28:25973368-25973740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr28:34430588-34430225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
53-291
               

               
Cow position:
               
chr28:12946781-12947032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
53-420
               

               
Cow position:
               
chr28:5199664-5200045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
55-243
               

               
Cow position:
               
chr28:33032103-33032297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
55-423
               

               
Cow position:
               
chr28:10606793-10606417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
56-388
               

               
Cow position:
               
chr28:4440142-4440484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
57-350
               

               
Cow position:
               
chr28:25806411-25806711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr28:4308068-4307670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
60-420
               

               
Cow position:
               
chr28:8358747-8359120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
61-353
               

               
Cow position:
               
chr28:15538845-15538546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
61-370
               

               
Cow position:
               
chr28:25399725-25400043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chr28:7439090-7439422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
63-390
               

               
Cow position:
               
chr28:22332385-22332718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
65-406
               

               
Cow position:
               
chr28:24082118-24082474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
66-365
               

               
Cow position:
               
chr28:9812135-9812434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
69-430
               

               
Cow position:
               
chr28:10495423-10495069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
70-371
               

               
Cow position:
               
chr28:22571809-22571512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
73-391
               

               
Cow position:
               
chr28:8140341-8140672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
73-445
               

               
Cow position:
               
chr28:23447964-23447592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr28:14494698-14494942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
218, 37
               

               
Conread position:
               
75-290
               

               
Cow position:
               
chr28:2872778-2873001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
75-332
               

               
Cow position:
               
chr28:4355409-4355678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr28:27161469-27161186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
75-375
               

               
Cow position:
               
chr28:10863921-10863623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
75-400
               

               
Cow position:
               
chr28:2774924-2775248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
75-400
               

               
Cow position:
               
chr28:30746867-30746540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
76-400
               

               
Cow position:
               
chr28:19262727-19262386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
76-400
               

               
Cow position:
               
chr28:23616269-23616603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
77-387
               

               
Cow position:
               
chr28:3740747-3741053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
77-400
               

               
Cow position:
               
chr28:7009112-7008783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 256
               

               
Conread position:
               
77-400
               

               
Cow position:
               
chr28:10057729-10057389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 322
               

               
Conread position:
               
78-263
               

               
Cow position:
               
chr28:13195236-13195434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
79-438
               

               
Cow position:
               
chr28:3449164-3449544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 376
               

               
Conread position:
               
80-291
               

               
Cow position:
               
chr28:2652436-2652223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
83-242
               

               
Cow position:
               
chr28:33894142-33893975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr28:5838409-5838561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr28:11346613-11346291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr28:12672587-12672263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
100-394
               

               
Cow position:
               
chr28:11815190-11814887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
102-300
               

               
Cow position:
               
chr28:17601989-17601783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
102-400
               

               
Cow position:
               
chr28:7372235-7371912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
102-404
               

               
Cow position:
               
chr28:19564342-19564033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 206
               

               
Conread position:
               
103-334
               

               
Cow position:
               
chr28:17398338-17398100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
103-334
               

               
Cow position:
               
chr28:17414579-17414341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
104-319
               

               
Cow position:
               
chr28:5166654-5166885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 159
               

               
Conread position:
               
104-393
               

               
Cow position:
               
chr28:3011385-3011076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
104-400
               

               
Cow position:
               
chr28:3484465-3484784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
104-403
               

               
Cow position:
               
chr28:22813153-22813449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
105-336
               

               
Cow position:
               
chr28:13090631-13090392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
105-455
               

               
Cow position:
               
chr28:23296212-23296574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 224
               

               
Conread position:
               
106-340
               

               
Cow position:
               
chr28:34248133-34247891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
106-388
               

               
Cow position:
               
chr28:18370118-18369828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr28:17354738-17354452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
180, 73
               

               
Conread position:
               
106-412
               

               
Cow position:
               
chr28:12933841-12933521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr28:12363270-12362975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 191
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr28:2801130-2801425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
109-393
               

               
Cow position:
               
chr28:6358517-6358219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
111-400
               

               
Cow position:
               
chr28:20759801-20759495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr28:25195610-25195842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr28:2523843-2524119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
116-400
               

               
Cow position:
               
chr28:5139092-5138801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 218
               

               
Conread position:
               
116-400
               

               
Cow position:
               
chr28:11307603-11307320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
124-370
               

               
Cow position:
               
chr28:24706817-24707075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
167, 58
               

               
Conread position:
               
131-393
               

               
Cow position:
               
chr28:7619232-7618969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
132-331
               

               
Cow position:
               
chr28:30865337-30865548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
132-341
               

               
Cow position:
               
chr28:7388845-7388632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr28:3161031-3160869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr28:5297204-5297362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
133-341
               

               
Cow position:
               
chr28:8147939-8147725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
133-341
               

               
Cow position:
               
chr28:25677424-25677201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 217
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr28:4181926-4182199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
159, 199
               

               
Conread position:
               
133-430
               

               
Cow position:
               
chr28:7350580-7350882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
159, 42
               

               
Conread position:
               
134-327
               

               
Cow position:
               
chr28:10589100-10588895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr28:7156764-7156983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
134-393
               

               
Cow position:
               
chr28:4045776-4046035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr28:17071258-17071525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
148-370
               

               
Cow position:
               
chr28:7437522-7437299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
148-388
               

               
Cow position:
               
chr28:7132138-7131906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
148-392
               

               
Cow position:
               
chr28:2279653-2279412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
148-400
               

               
Cow position:
               
chr28:17012354-17012107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
148-403
               

               
Cow position:
               
chr28:4013024-4013284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
149-328
               

               
Cow position:
               
chr28:4765614-4765803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
149-328
               

               
Cow position:
               
chr28:7776564-7776373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
151-392
               

               
Cow position:
               
chr28:20397430-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
151-443
               

               
Cow position:
               
chr28:4873408-4873084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
24, 299
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr28:11559694-11559459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
153-442
               

               
Cow position:
               
chr28:33322396-33322694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 185
               

               
Conread position:
               
154-347
               

               
Cow position:
               
chr28:8149682-8149485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
156-301
               

               
Cow position:
               
chr28:4823552-4823697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
158-332
               

               
Cow position:
               
chr28:17601605-17601422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
158-402
               

               
Cow position:
               
chr28:5650790-5650544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
159-388
               

               
Cow position:
               
chr28:28809903-28810141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
159-436
               

               
Cow position:
               
chr28:11059451-11059727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
162-393
               

               
Cow position:
               
chr28:34843623-34843381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
166-393
               

               
Cow position:
               
chr28:5235837-5236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
166-400
               

               
Cow position:
               
chr28:3726258-3726010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
166-428
               

               
Cow position:
               
chr28:28560851-28561125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 225
               

               
Conread position:
               
172-403
               

               
Cow position:
               
chr28:777640-777877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
172-415
               

               
Cow position:
               
chr28:6975208-6975450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
173-400
               

               
Cow position:
               
chr28:17739790-17740023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr28:4185872-4186110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
175-347
               

               
Cow position:
               
chr28:2772678-2772855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr28:19295163-19294964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
175-412
               

               
Cow position:
               
chr28:3200427-3200674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 13
               

               
Conread position:
               
176-351
               

               
Cow position:
               
chr28:7498179-7497997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
117, 154
               

               
Conread position:
               
179-424
               

               
Cow position:
               
chr28:26944188-26943927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-385
               

               
Cow position:
               
chr28:555478-555678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr28:23262480-23262252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr28:27721676-27721894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
182-398
               

               
Cow position:
               
chr28:11398823-11398598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
182-400
               

               
Cow position:
               
chr28:8827139-8827362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
182-404
               

               
Cow position:
               
chr28:19216796-19217014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
182-430
               

               
Cow position:
               
chr28:31223583-31223325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr28:11743842-11743637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
186-341
               

               
Cow position:
               
chr28:5867705-5867861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
186-388
               

               
Cow position:
               
chr28:3411009-3410804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
186-400
               

               
Cow position:
               
chr28:13133610-13133833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr28:17680600-17680826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
186-420
               

               
Cow position:
               
chr28:18770063-18770308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
186-426
               

               
Cow position:
               
chr28:4937264-4937015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
186-429
               

               
Cow position:
               
chr28:5630076-5630326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
186-432
               

               
Cow position:
               
chr28:13356389-13356136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
187-393
               

               
Cow position:
               
chr28:21008686-21008480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
188-377
               

               
Cow position:
               
chr28:19015696-19015878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
188-428
               

               
Cow position:
               
chr28:2819755-2819994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
189-393
               

               
Cow position:
               
chr28:4006767-4006972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
191-378
               

               
Cow position:
               
chr28:8259611-8259807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
191-429
               

               
Cow position:
               
chr28:4163596-4163353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr28:5231922-5232124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 118
               

               
Conread position:
               
193-393
               

               
Cow position:
               
chr28:5441913-5441706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
193-430
               

               
Cow position:
               
chr28:13048298-13048057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
193-431
               

               
Cow position:
               
chr28:20173821-20174068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr28:9384301-9384109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
194-393
               

               
Cow position:
               
chr28:10480821-10480612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
196-412
               

               
Cow position:
               
chr28:29850827-29850609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 102
               

               
Conread position:
               
196-429
               

               
Cow position:
               
chr28:15362567-15362805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
196-442
               

               
Cow position:
               
chr28:6563910-6563654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
198-405
               

               
Cow position:
               
chr28:19039029-19038815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
199-387
               

               
Cow position:
               
chr28:18797311-18797494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
200-390
               

               
Cow position:
               
chr28:19128177-19127985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
200-403
               

               
Cow position:
               
chr28:24064903-24064691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
202-400
               

               
Cow position:
               
chr28:12973874-12974082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
202-400
               

               
Cow position:
               
chr28:26826217-26826420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
208-393
               

               
Cow position:
               
chr28:18608368-18608174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr28:7557734-7557538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
208-404
               

               
Cow position:
               
chr28:17728099-17727909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr28:21207368-21207149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 95
               

               
Conread position:
               
211-333
               

               
Cow position:
               
chr28:26784238-26784110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
211-400
               

               
Cow position:
               
chr28:14242696-14242894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
211-425
               

               
Cow position:
               
chr28:19994943-19994723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
212-392
               

               
Cow position:
               
chr28:2821257-2821451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
213-333
               

               
Cow position:
               
chr28:34097612-34097488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
213-341
               

               
Cow position:
               
chr28:2743086-2743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
213-375
               

               
Cow position:
               
chr28:4022678-4022848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr28:20968575-20968375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr28:10888643-10888809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr28:11411530-11411348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr28:117757-117560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr28:4073975-4074175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
214-400
               

               
Cow position:
               
chr28:13174558-13174356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
214-427
               

               
Cow position:
               
chr28:5673881-5674097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
215-386
               

               
Cow position:
               
chr28:10203126-10203295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr28:20046560-20046732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chr28:8167344-8167193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
216-376
               

               
Cow position:
               
chr28:22630020-22630177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
216-393
               

               
Cow position:
               
chr28:7644748-7644935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
217-418
               

               
Cow position:
               
chr28:8716380-8716160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
217-428
               

               
Cow position:
               
chr28:32014793-32015012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
219-370
               

               
Cow position:
               
chr28:13448134-13448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr28:18761990-18761798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr28:26530854-26530644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
223-393
               

               
Cow position:
               
chr28:5552700-5552516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr28:659279-659089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
224-419
               

               
Cow position:
               
chr28:11827704-11827907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
226-412
               

               
Cow position:
               
chr28:34081846-34081661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
227-393
               

               
Cow position:
               
chr28:3423796-3423968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
227-393
               

               
Cow position:
               
chr28:9109235-9109402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
229-392
               

               
Cow position:
               
chr28:7964657-7964488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
229-400
               

               
Cow position:
               
chr28:5609896-5609720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chr28:17620339-17620120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
232-400
               

               
Cow position:
               
chr28:2892276-2892454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
232-404
               

               
Cow position:
               
chr28:5245380-5245560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 73
               

               
Conread position:
               
232-442
               

               
Cow position:
               
chr28:26820255-26820032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
234-376
               

               
Cow position:
               
chr28:20281784-20281926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr28:10252890-10252717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr28:33032515-33032676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
235-428
               

               
Cow position:
               
chr28:2077527-2077728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
236-400
               

               
Cow position:
               
chr28:118637-118812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
238-400
               

               
Cow position:
               
chr28:3678392-3678557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chr28:21744745-21744942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
239-388
               

               
Cow position:
               
chr28:19118000-19118157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
239-400
               

               
Cow position:
               
chr28:11562215-11562045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
240-403
               

               
Cow position:
               
chr28:26960877-26960711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
245-370
               

               
Cow position:
               
chr28:2593718-2593844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
245-419
               

               
Cow position:
               
chr28:16569842-16570020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
247-400
               

               
Cow position:
               
chr28:16200704-16200542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
248-400
               

               
Cow position:
               
chr28:6301121-6301282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
248-400
               

               
Cow position:
               
chr28:17738113-17737952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
249-400
               

               
Cow position:
               
chr28:3759031-3759195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
249-400
               

               
Cow position:
               
chr28:8656125-8655968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
265-424
               

               
Cow position:
               
chr28:3311167-3310998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
266-430
               

               
Cow position:
               
chr28:16159813-16159645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
302-427
               

               
Cow position:
               
chr28:16964866-16964734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
304-419
               

               
Cow position:
               
chr28:27941680-27941564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 77
               
Show alignments to all cow chromosomes.