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Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL01D110084.5
        

               
Conread position:
               
13-286
               

               
Cow position:
               
chr5:34192723-34193005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr5:12673636-12673255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
19-391
               

               
Cow position:
               
chr5:56523993-56524372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr5:36255437-36255153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
21-430
               

               
Cow position:
               
chr5:44447037-44446625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
22-243
               

               
Cow position:
               
chr5:3004551-3004779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
22-289
               

               
Cow position:
               
chr5:45574443-45574722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
26-404
               

               
Cow position:
               
chr5:39242361-39242012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
26-419
               

               
Cow position:
               
chr5:11540215-11539811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr5:8994736-8994527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
27-412
               

               
Cow position:
               
chr5:62638735-62639117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
28-400
               

               
Cow position:
               
chr5:43923320-43922951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
29-389
               

               
Cow position:
               
chr5:65967900-65967524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr5:22737936-22738317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
30-404
               

               
Cow position:
               
chr5:55955738-55956134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
30-430
               

               
Cow position:
               
chr5:58519572-58519165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
30-442
               

               
Cow position:
               
chr5:16214520-16214941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
31-260
               

               
Cow position:
               
chr5:56443115-56443348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
31-287
               

               
Cow position:
               
chr5:34887364-34887095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
31-387
               

               
Cow position:
               
chr5:31469751-31469385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
31-407
               

               
Cow position:
               
chr5:15478947-15479361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
31-427
               

               
Cow position:
               
chr5:68330149-68329762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
32-181
               

               
Cow position:
               
chr5:57271430-57271274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
32-243
               

               
Cow position:
               
chr5:24485591-24485377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
32-250
               

               
Cow position:
               
chr5:54405061-54404827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 214
               

               
Conread position:
               
32-258
               

               
Cow position:
               
chr5:72287077-72286844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr5:50729330-50729552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr5:61840021-61840287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 178
               

               
Conread position:
               
32-323
               

               
Cow position:
               
chr5:13536991-13537275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr5:54086370-54086689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 200
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr5:43738117-43737818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
32-341
               

               
Cow position:
               
chr5:28229992-28230326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
32-393
               

               
Cow position:
               
chr5:30844945-30845319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr5:20127888-20128274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr5:35459459-35459076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
32-400
               

               
Cow position:
               
chr5:38832954-38833334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
32-403
               

               
Cow position:
               
chr5:28224287-28224665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 253
               

               
Conread position:
               
32-405
               

               
Cow position:
               
chr5:6528515-6528889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
32-420
               

               
Cow position:
               
chr5:47888880-47888492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
35, 206
               

               
Conread position:
               
33-214
               

               
Cow position:
               
chr5:75230519-75230702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
33-241
               

               
Cow position:
               
chr5:10261403-10261179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
33-263
               

               
Cow position:
               
chr5:32140872-32140632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr5:35449089-35449313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr5:25900034-25899779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
33-348
               

               
Cow position:
               
chr5:40357035-40356689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 275
               

               
Conread position:
               
33-388
               

               
Cow position:
               
chr5:3281667-3282044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
33-400
               

               
Cow position:
               
chr5:42064038-42064427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
33-400
               

               
Cow position:
               
chr5:46512931-46512548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
34-137
               

               
Cow position:
               
chr5:45026081-45025976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
34-169
               

               
Cow position:
               
chr5:61875341-61875205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
34-184
               

               
Cow position:
               
chr5:32963793-32963636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr5:43816775-43816612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr5:31434102-31434264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
34-205
               

               
Cow position:
               
chr5:42747992-42748176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
34-206
               

               
Cow position:
               
chr5:14420508-14420321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
34-216
               

               
Cow position:
               
chr5:62826917-62826723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr5:43474684-43474878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chr5:59443415-59443213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
34-223
               

               
Cow position:
               
chr5:45036858-45037050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:17644819-17644616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:20344993-20345200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:26790615-26790417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:30639016-30638825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:40169350-40169150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 171
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:43395302-43395111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
123, 146
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:51490918-51490726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr5:54064616-54064814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr5:41522959-41522753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr5:27015517-27015732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr5:1766507-1766295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr5:26099534-26099324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr5:41486901-41486683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr5:56135132-56134913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr5:1027855-1027636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr5:32956259-32956036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr5:54713900-54713673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr5:3668734-3668957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr5:49362155-49361933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
34-253
               

               
Cow position:
               
chr5:29980149-29979916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
34-256
               

               
Cow position:
               
chr5:21964128-21964358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr5:2500352-2500109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr5:28957780-28957544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr5:34885319-34885091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
34-260
               

               
Cow position:
               
chr5:64823476-64823237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-263
               

               
Cow position:
               
chr5:13691738-13691491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-263
               

               
Cow position:
               
chr5:58229542-58229772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr5:34638722-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr5:46122514-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr5:56820425-56820179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr5:41951248-41951008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
34-279
               

               
Cow position:
               
chr5:47547881-47547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
34-279
               

               
Cow position:
               
chr5:65601297-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
34-280
               

               
Cow position:
               
chr5:9390372-9390646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
34-281
               

               
Cow position:
               
chr5:29212785-29213032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr5:5111240-5110979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr5:8162987-8162720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr5:16508927-16509204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr5:56518373-56518124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr5:360110-359840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr5:20407830-20407579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr5:26370534-26370782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr5:68265127-68264859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:31480991-31481250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:32696976-32696721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:41452830-41452570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:50637666-50637923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 202
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:65887178-65886908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 200
               

               
Conread position:
               
34-289
               

               
Cow position:
               
chr5:75437060-75436785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 261
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr5:55928779-55929047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr5:57575602-57575876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr5:57736951-57737202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr5:65588544-65588802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr5:4507124-4506861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr5:33661691-33661950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr5:39094390-39094654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr5:41392572-41392836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
34-292
               

               
Cow position:
               
chr5:7552582-7552311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr5:21525001-21525269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
34-298
               

               
Cow position:
               
chr5:41609136-41609395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr5:69520727-69521003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
34-300
               

               
Cow position:
               
chr5:31660804-31660544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr5:28927756-28927480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr5:58793778-58793493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr5:63992326-63992058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
34-309
               

               
Cow position:
               
chr5:59325992-59325720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
34-310
               

               
Cow position:
               
chr5:15598397-15598108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
34-310
               

               
Cow position:
               
chr5:28926351-28926057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
34-310
               

               
Cow position:
               
chr5:31640264-31640548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
34-315
               

               
Cow position:
               
chr5:52000055-52000353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
34-316
               

               
Cow position:
               
chr5:62142507-62142812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
34-318
               

               
Cow position:
               
chr5:34463749-34463442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr5:3639645-3639358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr5:50215723-50215425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr5:72564598-72564903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
34-323
               

               
Cow position:
               
chr5:47323287-47323606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 214
               

               
Conread position:
               
34-325
               

               
Cow position:
               
chr5:29771351-29771674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
34-328
               

               
Cow position:
               
chr5:49685444-49685128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr5:65933095-65932795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
34-331
               

               
Cow position:
               
chr5:39258370-39258656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
34-332
               

               
Cow position:
               
chr5:6045124-6045439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 283
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr5:4220817-4221132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr5:4710308-4709997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr5:20783461-20783770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr5:27306155-27306459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr5:63987610-63987292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr5:58855940-58856259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr5:59115217-59115538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr5:62985353-62985669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 203
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr5:12866992-12866670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 234
               

               
Conread position:
               
34-339
               

               
Cow position:
               
chr5:57626643-57626941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr5:23168982-23168665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:9090187-9089866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:37808828-37808502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:43992157-43992488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:46510030-46509710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 295
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:51151526-51151197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:54060110-54060436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr5:56317131-56317451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-342
               

               
Cow position:
               
chr5:44752474-44752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
34-342
               

               
Cow position:
               
chr5:45803897-45804211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
34-350
               

               
Cow position:
               
chr5:7723507-7723834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
34-352
               

               
Cow position:
               
chr5:37646714-37646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
34-354
               

               
Cow position:
               
chr5:26094333-26093991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
34-354
               

               
Cow position:
               
chr5:30950083-30949740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
34-357
               

               
Cow position:
               
chr5:12709722-12710056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
43, 221
               

               
Conread position:
               
34-360
               

               
Cow position:
               
chr5:51935019-51935364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 249
               

               
Conread position:
               
34-362
               

               
Cow position:
               
chr5:7193268-7193594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
34-369
               

               
Cow position:
               
chr5:71494654-71495010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 332
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr5:24348948-24349286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr5:33080952-33080614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr5:35684771-35685133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr5:1987453-1987812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr5:4617210-4617542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr5:20554913-20554568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 174
               

               
Conread position:
               
34-377
               

               
Cow position:
               
chr5:69461171-69461531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr5:458318-458698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 252
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr5:23140736-23140391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr5:36855049-36855392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr5:53055717-53055362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
34-378
               

               
Cow position:
               
chr5:54350524-54350174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr5:6286590-6286249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr5:12149382-12149747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr5:22643381-22643044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr5:47317133-47316772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr5:5938161-5938529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr5:45705884-45706239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr5:52040483-52040118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr5:57266061-57265699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr5:59082359-59081989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr5:50483025-50482653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr5:50943317-50942957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr5:71454758-71454426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr5:6504043-6503670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr5:12322964-12322605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr5:12873580-12873958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:7044874-7044499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:11668342-11667977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:26133237-26132888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:26377830-26377473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:28330495-28330134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:29353294-29352925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:34049946-34050315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:38853196-38853558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:44054201-44053839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:45225988-45225613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:45409163-45409532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:61600249-61600614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:64137088-64137465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:64524044-64523657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
34-388
               

               
Cow position:
               
chr5:64697617-64697995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr5:5201750-5202111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr5:27179500-27179873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr5:30178674-30178294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr5:34506089-34505716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr5:41713146-41713496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:16938171-16937822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:26097132-26097502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:41010160-41009798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:52165346-52164961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:56070689-56071070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr5:66257478-66257846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:6839242-6838866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:14550749-14550369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:17087192-17086804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:22242949-22242561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 249
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:26262839-26262472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:29903686-29903330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:35145189-35145548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:57327629-57328010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:60210303-60209933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 292
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:62172255-62172611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:65941417-65941037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr5:68604695-68605076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr5:16893939-16893564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr5:30629321-30628939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
34-394
               

               
Cow position:
               
chr5:33414572-33414194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
34-397
               

               
Cow position:
               
chr5:55967046-55966656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-398
               

               
Cow position:
               
chr5:17027931-17028294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:59092-58710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:3492038-3492405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:3549941-3549585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:3771683-3772062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:4322247-4322633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:14904237-14903846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 355
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:15363727-15364090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:18574007-18574402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:26467456-26467847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:30253578-30253960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:32153479-32153091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:32394437-32394822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:32975715-32975338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:34441955-34441580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:34624805-34625168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:36868582-36868957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:40889447-40889075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:41303254-41302856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:44049539-44049920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:45845859-45845470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:47756605-47756992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 189
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:47871214-47870834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 204
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:53835551-53835941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:57591527-57591904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 167
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:60952497-60952882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:62870200-62869843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
34-401
               

               
Cow position:
               
chr5:5855716-5856082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:2309727-2309335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:5257460-5257064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:16025624-16025260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:35969379-35969763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:44796882-44796513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:58144767-58144381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 263
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr5:69731354-69731706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
34-404
               

               
Cow position:
               
chr5:54311169-54311580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
34-404
               

               
Cow position:
               
chr5:55176723-55177104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
34-404
               

               
Cow position:
               
chr5:72895529-72895910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr5:72045804-72045451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
34-409
               

               
Cow position:
               
chr5:39447694-39447296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
34-412
               

               
Cow position:
               
chr5:17063257-17062847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
34-412
               

               
Cow position:
               
chr5:69337664-69338048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
34-414
               

               
Cow position:
               
chr5:14314358-14314754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr5:28302903-28302517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
34-419
               

               
Cow position:
               
chr5:56467541-56467910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr5:21828701-21829102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr5:72903391-72903000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
34-421
               

               
Cow position:
               
chr5:34561845-34562250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
34-421
               

               
Cow position:
               
chr5:56028694-56028300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr5:50722883-50723291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr5:1247113-1247506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr5:63647638-63647230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr5:17999658-17999249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 228
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr5:35208098-35208509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr5:72007016-72006636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr5:44994201-44993792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
34-428
               

               
Cow position:
               
chr5:29827890-29828296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
34-428
               

               
Cow position:
               
chr5:55756603-55756165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 223
               

               
Conread position:
               
34-429
               

               
Cow position:
               
chr5:56014571-56014970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
34-430
               

               
Cow position:
               
chr5:11427405-11426985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 374
               

               
Conread position:
               
34-431
               

               
Cow position:
               
chr5:57074498-57074083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
34-432
               

               
Cow position:
               
chr5:37645910-37646326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
34-433
               

               
Cow position:
               
chr5:30276530-30276942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
34-441
               

               
Cow position:
               
chr5:65752693-65753120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chr5:44583281-44583099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr5:21920205-21920456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
32, 230
               

               
Conread position:
               
35-370
               

               
Cow position:
               
chr5:55068543-55068895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
35-377
               

               
Cow position:
               
chr5:34977002-34976643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
35-400
               

               
Cow position:
               
chr5:40152313-40152707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
35-403
               

               
Cow position:
               
chr5:9894289-9893902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
35-409
               

               
Cow position:
               
chr5:4551969-4552364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 213
               

               
Conread position:
               
35-421
               

               
Cow position:
               
chr5:57768135-57767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
36-181
               

               
Cow position:
               
chr5:14415611-14415764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr5:18090566-18090722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr5:7140266-7140056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr5:35235870-35235656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
36-249
               

               
Cow position:
               
chr5:1678238-1678454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
36-282
               

               
Cow position:
               
chr5:40039932-40039671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
36-316
               

               
Cow position:
               
chr5:4218716-4218993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
36-334
               

               
Cow position:
               
chr5:37377714-37378007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
36-354
               

               
Cow position:
               
chr5:1396464-1396770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
271, 21
               

               
Conread position:
               
36-357
               

               
Cow position:
               
chr5:34528400-34528721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
36-368
               

               
Cow position:
               
chr5:28248015-28248362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr5:48828993-48829358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
36-392
               

               
Cow position:
               
chr5:51053809-51053436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr5:8024354-8024002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
36-393
               

               
Cow position:
               
chr5:30302734-30303094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
36-400
               

               
Cow position:
               
chr5:42845762-42845377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
36-400
               

               
Cow position:
               
chr5:64176282-64175910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
36-412
               

               
Cow position:
               
chr5:74858412-74858820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
36-424
               

               
Cow position:
               
chr5:39936941-39937358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
36-450
               

               
Cow position:
               
chr5:4280302-4280715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
37-290
               

               
Cow position:
               
chr5:46426011-46425752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:42744632-42744894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
37-380
               

               
Cow position:
               
chr5:44028462-44028106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
37-381
               

               
Cow position:
               
chr5:45397418-45397767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr5:66581803-66582183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
37-414
               

               
Cow position:
               
chr5:35229288-35228905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr5:66281252-66281400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr5:49820980-49821175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr5:35209636-35209372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 256
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr5:52645235-52644975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr5:41636713-41637004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
38-335
               

               
Cow position:
               
chr5:32378709-32378981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
38-342
               

               
Cow position:
               
chr5:60715514-60715205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
38-389
               

               
Cow position:
               
chr5:741104-740741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
38-392
               

               
Cow position:
               
chr5:18898824-18899168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
38-393
               

               
Cow position:
               
chr5:39442134-39442490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
38-404
               

               
Cow position:
               
chr5:41164934-41165306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
38-407
               

               
Cow position:
               
chr5:20779541-20779171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
39-276
               

               
Cow position:
               
chr5:72172865-72173116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
39-331
               

               
Cow position:
               
chr5:64758925-64758615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
39-332
               

               
Cow position:
               
chr5:25231166-25230866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
39-335
               

               
Cow position:
               
chr5:21040124-21039829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr5:6683509-6683192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr5:54089880-54090218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
39-388
               

               
Cow position:
               
chr5:26990239-26990587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
39-391
               

               
Cow position:
               
chr5:3582414-3582765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
39-403
               

               
Cow position:
               
chr5:43858590-43858195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr5:41531245-41531022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
40-336
               

               
Cow position:
               
chr5:3204677-3204985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
40-393
               

               
Cow position:
               
chr5:48143948-48143577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 197
               

               
Conread position:
               
40-393
               

               
Cow position:
               
chr5:61576382-61576759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
40-412
               

               
Cow position:
               
chr5:65776543-65776145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr5:44849879-44849706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr5:23866317-23866112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr5:67540360-67540111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
41-393
               

               
Cow position:
               
chr5:42050391-42050757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
42-259
               

               
Cow position:
               
chr5:55750407-55750192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
42-282
               

               
Cow position:
               
chr5:40388026-40387785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
42-334
               

               
Cow position:
               
chr5:4032150-4031831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
42-373
               

               
Cow position:
               
chr5:55232948-55232627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
42-393
               

               
Cow position:
               
chr5:21617300-21617668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
43-404
               

               
Cow position:
               
chr5:30487084-30487451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
43-428
               

               
Cow position:
               
chr5:35247265-35246864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr5:31020286-31020125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
46-290
               

               
Cow position:
               
chr5:31918504-31918745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
46-299
               

               
Cow position:
               
chr5:34184068-34184335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
46-393
               

               
Cow position:
               
chr5:19278851-19278490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
46-393
               

               
Cow position:
               
chr5:25495497-25495138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
46-393
               

               
Cow position:
               
chr5:50900753-50901111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
46-417
               

               
Cow position:
               
chr5:40109347-40109723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
47-291
               

               
Cow position:
               
chr5:61809834-61809582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
47-331
               

               
Cow position:
               
chr5:37190244-37189945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
47-332
               

               
Cow position:
               
chr5:50821633-50821924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
47-378
               

               
Cow position:
               
chr5:56877338-56877667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr5:7057550-7057177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr5:64321603-64321981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
48-388
               

               
Cow position:
               
chr5:30153169-30152828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
48-400
               

               
Cow position:
               
chr5:54048498-54048130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
48-409
               

               
Cow position:
               
chr5:12761265-12760891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr5:60448069-60448265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
51-265
               

               
Cow position:
               
chr5:54154534-54154313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
52-261
               

               
Cow position:
               
chr5:50972385-50972600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
52-292
               

               
Cow position:
               
chr5:27411537-27411296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr5:65883921-65883659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
52-387
               

               
Cow position:
               
chr5:54750691-54751014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
52-388
               

               
Cow position:
               
chr5:39695508-39695839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
52-397
               

               
Cow position:
               
chr5:39874980-39875322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 251
               

               
Conread position:
               
52-400
               

               
Cow position:
               
chr5:66972282-66972650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
52-403
               

               
Cow position:
               
chr5:74643814-74643461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
53-286
               

               
Cow position:
               
chr5:76119412-76119647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
53-291
               

               
Cow position:
               
chr5:63964313-63964061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
53-341
               

               
Cow position:
               
chr5:53855550-53855868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
53-393
               

               
Cow position:
               
chr5:47696583-47696247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
53-420
               

               
Cow position:
               
chr5:49919782-49920165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
54-341
               

               
Cow position:
               
chr5:40559501-40559793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
54-388
               

               
Cow position:
               
chr5:55259284-55259615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
55-230
               

               
Cow position:
               
chr5:7921542-7921361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr5:34115511-34115712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
55-260
               

               
Cow position:
               
chr5:12566870-12566668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr5:34300776-34301003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
55-400
               

               
Cow position:
               
chr5:44848165-44847807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
56-224
               

               
Cow position:
               
chr5:47721403-47721581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr5:57101917-57101593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
56-400
               

               
Cow position:
               
chr5:29097218-29097582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 292
               

               
Conread position:
               
57-400
               

               
Cow position:
               
chr5:25035382-25035034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
60-260
               

               
Cow position:
               
chr5:25447427-25447637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
60-360
               

               
Cow position:
               
chr5:14473550-14473220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
60-393
               

               
Cow position:
               
chr5:23529410-23529089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
60-403
               

               
Cow position:
               
chr5:71768611-71768285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
233, 49
               

               
Conread position:
               
60-419
               

               
Cow position:
               
chr5:35763141-35763490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
61-393
               

               
Cow position:
               
chr5:73168134-73167801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
61-404
               

               
Cow position:
               
chr5:67932597-67932242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
63-341
               

               
Cow position:
               
chr5:54768044-54767747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
63-384
               

               
Cow position:
               
chr5:52126643-52126975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
64-294
               

               
Cow position:
               
chr5:45273634-45273394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
65-384
               

               
Cow position:
               
chr5:64027140-64026812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
65-398
               

               
Cow position:
               
chr5:28035620-28035942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
65-420
               

               
Cow position:
               
chr5:50684125-50684480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
66-281
               

               
Cow position:
               
chr5:33552539-33552329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
66-341
               

               
Cow position:
               
chr5:63427137-63426842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
66-390
               

               
Cow position:
               
chr5:57419922-57419587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
67-430
               

               
Cow position:
               
chr5:56680119-56680486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 243
               

               
Conread position:
               
67-431
               

               
Cow position:
               
chr5:19335915-19335530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 356
               

               
Conread position:
               
68-379
               

               
Cow position:
               
chr5:59057877-59057546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 210
               

               
Conread position:
               
69-401
               

               
Cow position:
               
chr5:43390905-43391247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
69-433
               

               
Cow position:
               
chr5:49474670-49474297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
71-388
               

               
Cow position:
               
chr5:35826479-35826805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr5:60747398-60747141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
72-341
               

               
Cow position:
               
chr5:26477134-26476856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr5:19523776-19524004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
73-400
               

               
Cow position:
               
chr5:37255452-37255113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
74-404
               

               
Cow position:
               
chr5:16179645-16179299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
75-336
               

               
Cow position:
               
chr5:58490598-58490884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
75-337
               

               
Cow position:
               
chr5:49440991-49440720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr5:44726445-44726173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
75-398
               

               
Cow position:
               
chr5:18289010-18289336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
75-400
               

               
Cow position:
               
chr5:64140411-64140758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 262
               

               
Conread position:
               
75-412
               

               
Cow position:
               
chr5:32339083-32338728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
76-341
               

               
Cow position:
               
chr5:16206273-16205993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr5:53710811-53710532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr5:33560851-33560531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
77-400
               

               
Cow position:
               
chr5:22666976-22667290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
215, 32
               

               
Conread position:
               
78-413
               

               
Cow position:
               
chr5:65765244-65764895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
78-425
               

               
Cow position:
               
chr5:61999658-61999311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
78-450
               

               
Cow position:
               
chr5:70678747-70678374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
215, 38
               

               
Conread position:
               
79-400
               

               
Cow position:
               
chr5:12901800-12902139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
81-289
               

               
Cow position:
               
chr5:57561404-57561625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
81-341
               

               
Cow position:
               
chr5:13717684-13717412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr5:31475568-31475897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
84-388
               

               
Cow position:
               
chr5:12434425-12434742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
86-323
               

               
Cow position:
               
chr5:38076591-38076339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr5:23678812-23678532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 173
               

               
Conread position:
               
86-393
               

               
Cow position:
               
chr5:14921038-14920713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
86-394
               

               
Cow position:
               
chr5:60016059-60016378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
86-404
               

               
Cow position:
               
chr5:71846032-71845702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 178
               

               
Conread position:
               
86-412
               

               
Cow position:
               
chr5:58446695-58447059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
87-284
               

               
Cow position:
               
chr5:56635793-56635992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
87-428
               

               
Cow position:
               
chr5:43371305-43370946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
88-336
               

               
Cow position:
               
chr5:41293974-41294237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
89-397
               

               
Cow position:
               
chr5:53946790-53947116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
91-319
               

               
Cow position:
               
chr5:35785079-35784850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
93-419
               

               
Cow position:
               
chr5:36650448-36650799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
95-341
               

               
Cow position:
               
chr5:55019194-55019453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
97-438
               

               
Cow position:
               
chr5:50575686-50576031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
98-291
               

               
Cow position:
               
chr5:46684043-46683847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr5:46681811-46681482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
98-428
               

               
Cow position:
               
chr5:64555434-64555779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
99-430
               

               
Cow position:
               
chr5:25365994-25366349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 306
               

               
Conread position:
               
101-402
               

               
Cow position:
               
chr5:63234924-63234604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
102-393
               

               
Cow position:
               
chr5:17555124-17554822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
102-393
               

               
Cow position:
               
chr5:35976427-35976707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
102-403
               

               
Cow position:
               
chr5:46023152-46022835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
103-328
               

               
Cow position:
               
chr5:35125960-35126204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
103-376
               

               
Cow position:
               
chr5:49668389-49668683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr5:59384783-59384445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
104-341
               

               
Cow position:
               
chr5:1087288-1087044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
104-400
               

               
Cow position:
               
chr5:71015972-71015665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
105-424
               

               
Cow position:
               
chr5:33833953-33834285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 222
               

               
Conread position:
               
106-341
               

               
Cow position:
               
chr5:59873181-59872918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
107-393
               

               
Cow position:
               
chr5:57527007-57526714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr5:61914481-61914815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
108-393
               

               
Cow position:
               
chr5:43402812-43403122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
108-413
               

               
Cow position:
               
chr5:41884848-41885147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
112-289
               

               
Cow position:
               
chr5:42782801-42782622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
113-327
               

               
Cow position:
               
chr5:29515573-29515358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr5:37757909-37757677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
113-392
               

               
Cow position:
               
chr5:50713854-50713538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
117-393
               

               
Cow position:
               
chr5:19752226-19752514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
118-426
               

               
Cow position:
               
chr5:57371722-57372050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
119-419
               

               
Cow position:
               
chr5:57756108-57755795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
120-276
               

               
Cow position:
               
chr5:22445844-22445997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
120-340
               

               
Cow position:
               
chr5:67212284-67212519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 219
               

               
Conread position:
               
124-444
               

               
Cow position:
               
chr5:63831861-63832181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
75, 171
               

               
Conread position:
               
125-291
               

               
Cow position:
               
chr5:14345160-14344994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
131-388
               

               
Cow position:
               
chr5:52729076-52728804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr5:57994924-57994659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
132-336
               

               
Cow position:
               
chr5:33654604-33654389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
132-341
               

               
Cow position:
               
chr5:45420192-45419979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
160, 198
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr5:61455788-61456040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr5:59627031-59626760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr5:11769211-11769492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr5:43604086-43604359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr5:63627582-63627320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
133-422
               

               
Cow position:
               
chr5:7012905-7012604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
133-428
               

               
Cow position:
               
chr5:59395600-59395910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 284
               

               
Conread position:
               
134-404
               

               
Cow position:
               
chr5:20995151-20994865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
46, 245
               

               
Conread position:
               
136-330
               

               
Cow position:
               
chr5:35982793-35982584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
136-371
               

               
Cow position:
               
chr5:61492045-61492288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
154, 22
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr5:30805115-30805345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
137-384
               

               
Cow position:
               
chr5:60741194-60741448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
137-393
               

               
Cow position:
               
chr5:57156367-57156087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
137-429
               

               
Cow position:
               
chr5:63240923-63241228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 197
               

               
Conread position:
               
138-400
               

               
Cow position:
               
chr5:57393354-57393083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr5:41935701-41935437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
143-428
               

               
Cow position:
               
chr5:52001668-52001376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 243
               

               
Conread position:
               
145-427
               

               
Cow position:
               
chr5:50101423-50101132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 192
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr5:40237170-40237388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr5:55796007-55795773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 177
               

               
Conread position:
               
148-387
               

               
Cow position:
               
chr5:45404999-45405252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
148-393
               

               
Cow position:
               
chr5:58555098-58555368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
148-400
               

               
Cow position:
               
chr5:61784770-61784505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
149-371
               

               
Cow position:
               
chr5:17602242-17602016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr5:56361769-56361948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
150-375
               

               
Cow position:
               
chr5:453519-453745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
150-377
               

               
Cow position:
               
chr5:30418934-30419173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr5:51555111-51554878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
150-392
               

               
Cow position:
               
chr5:68537707-68537452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
150-440
               

               
Cow position:
               
chr5:20843440-20843138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 178
               

               
Conread position:
               
151-334
               

               
Cow position:
               
chr5:57150631-57150820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
151-393
               

               
Cow position:
               
chr5:20288303-20288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
152-388
               

               
Cow position:
               
chr5:49501863-49501611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 248
               

               
Conread position:
               
152-400
               

               
Cow position:
               
chr5:6444189-6443923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
152-412
               

               
Cow position:
               
chr5:15470894-15471155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
153-341
               

               
Cow position:
               
chr5:41981333-41981530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr5:30247557-30247312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
154-378
               

               
Cow position:
               
chr5:57686777-57686544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
155-388
               

               
Cow position:
               
chr5:57101561-57101319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
155-404
               

               
Cow position:
               
chr5:51065496-51065740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
156-433
               

               
Cow position:
               
chr5:62811789-62812079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 269
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr5:33273657-33273917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
157-426
               

               
Cow position:
               
chr5:37983130-37983418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
157-428
               

               
Cow position:
               
chr5:26549175-26548896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 190
               

               
Conread position:
               
158-393
               

               
Cow position:
               
chr5:48867493-48867257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
159-301
               

               
Cow position:
               
chr5:45574399-45574251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
159-336
               

               
Cow position:
               
chr5:9369298-9369114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
159-376
               

               
Cow position:
               
chr5:61007034-61007262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr5:23912231-23911992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
161-427
               

               
Cow position:
               
chr5:52108296-52108017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 247
               

               
Conread position:
               
163-341
               

               
Cow position:
               
chr5:57230367-57230177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr5:70750204-70749955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
170-393
               

               
Cow position:
               
chr5:52137917-52138151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr5:29681081-29681312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr5:53935562-53935308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 50
               

               
Conread position:
               
173-411
               

               
Cow position:
               
chr5:25597821-25598059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
173-412
               

               
Cow position:
               
chr5:30232895-30233142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
174-388
               

               
Cow position:
               
chr5:67679166-67679388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
175-433
               

               
Cow position:
               
chr5:2827362-2827629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr5:56060081-56059844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
176-412
               

               
Cow position:
               
chr5:18062330-18062078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr5:16939604-16939385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
179-341
               

               
Cow position:
               
chr5:60908658-60908826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
180-397
               

               
Cow position:
               
chr5:52723571-52723792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
180-400
               

               
Cow position:
               
chr5:11562730-11562508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
181-341
               

               
Cow position:
               
chr5:51490249-51490087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
181-370
               

               
Cow position:
               
chr5:17566445-17566245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
181-392
               

               
Cow position:
               
chr5:30561926-30562140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 117
               

               
Conread position:
               
181-430
               

               
Cow position:
               
chr5:57062535-57062279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 121
               

               
Conread position:
               
182-335
               

               
Cow position:
               
chr5:43844668-43844519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
182-393
               

               
Cow position:
               
chr5:44163374-44163160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
182-400
               

               
Cow position:
               
chr5:34347733-34347513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
182-404
               

               
Cow position:
               
chr5:4267664-4267884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 117
               

               
Conread position:
               
182-413
               

               
Cow position:
               
chr5:52852966-52853200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
111, 117
               

               
Conread position:
               
183-430
               

               
Cow position:
               
chr5:50824586-50824837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
185-403
               

               
Cow position:
               
chr5:56613566-56613340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 146
               

               
Conread position:
               
185-403
               

               
Cow position:
               
chr5:65552710-65552498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
186-331
               

               
Cow position:
               
chr5:57489946-57489799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
186-341
               

               
Cow position:
               
chr5:55129342-55129505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
186-351
               

               
Cow position:
               
chr5:27293885-27293720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-370
               

               
Cow position:
               
chr5:65679971-65679784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
186-381
               

               
Cow position:
               
chr5:2469208-2469010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr5:67634518-67634295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
186-393
               

               
Cow position:
               
chr5:69033221-69033010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr5:15364268-15364490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 75
               

               
Conread position:
               
186-400
               

               
Cow position:
               
chr5:4226346-4226575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr5:6520010-6520229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr5:46541056-46540837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr5:69383254-69383476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 144
               

               
Conread position:
               
186-428
               

               
Cow position:
               
chr5:6126838-6127080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
187-400
               

               
Cow position:
               
chr5:56860447-56860663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
187-404
               

               
Cow position:
               
chr5:14742214-14742431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-429
               

               
Cow position:
               
chr5:61049332-61049582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 244
               

               
Conread position:
               
188-393
               

               
Cow position:
               
chr5:7409953-7410159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 140
               

               
Conread position:
               
188-393
               

               
Cow position:
               
chr5:25020766-25020543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
188-400
               

               
Cow position:
               
chr5:48918811-48919018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
188-413
               

               
Cow position:
               
chr5:44810238-44809999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
189-328
               

               
Cow position:
               
chr5:59627102-59627249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
189-393
               

               
Cow position:
               
chr5:12299913-12300123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 130
               

               
Conread position:
               
189-432
               

               
Cow position:
               
chr5:61580288-61580532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
190-358
               

               
Cow position:
               
chr5:26497674-26497503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
191-428
               

               
Cow position:
               
chr5:742735-742978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr5:35513220-35513425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr5:3743327-3743540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr5:60515023-60514805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
192-430
               

               
Cow position:
               
chr5:55965889-55965642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
194-319
               

               
Cow position:
               
chr5:26723455-26723586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
194-433
               

               
Cow position:
               
chr5:17828472-17828225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 226
               

               
Conread position:
               
195-393
               

               
Cow position:
               
chr5:5016437-5016635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
196-378
               

               
Cow position:
               
chr5:65050202-65050022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
196-388
               

               
Cow position:
               
chr5:44196920-44196723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
196-434
               

               
Cow position:
               
chr5:5760304-5760054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
198-400
               

               
Cow position:
               
chr5:34533336-34533541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr5:64060459-64060666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
200-412
               

               
Cow position:
               
chr5:17104866-17105080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
202-393
               

               
Cow position:
               
chr5:47743643-47743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
202-400
               

               
Cow position:
               
chr5:7177166-7177372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
202-402
               

               
Cow position:
               
chr5:26147606-26147811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 138
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr5:66659527-66659750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
206-350
               

               
Cow position:
               
chr5:42623160-42623012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr5:38040544-38040361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
207-392
               

               
Cow position:
               
chr5:46063517-46063706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
207-394
               

               
Cow position:
               
chr5:51233999-51233810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr5:13270993-13270802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr5:37842255-37842066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr5:59335793-59336027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 219
               

               
Conread position:
               
213-400
               

               
Cow position:
               
chr5:16185404-16185600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr5:20882598-20882367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
214-384
               

               
Cow position:
               
chr5:32935772-32935948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
214-392
               

               
Cow position:
               
chr5:20812573-20812761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
214-411
               

               
Cow position:
               
chr5:44734698-44734496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
215-393
               

               
Cow position:
               
chr5:54753224-54753036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr5:49821456-49821655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr5:16668725-16668928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
215-428
               

               
Cow position:
               
chr5:57399224-57398998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
216-393
               

               
Cow position:
               
chr5:50087798-50087981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chr5:19079281-19079463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chr5:54127318-54127507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr5:29256678-29256482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
217-387
               

               
Cow position:
               
chr5:51125979-51125812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
218-381
               

               
Cow position:
               
chr5:56433911-56434083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
218-393
               

               
Cow position:
               
chr5:53980723-53980539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
219-388
               

               
Cow position:
               
chr5:40122578-40122401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
219-388
               

               
Cow position:
               
chr5:62572564-62572738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr5:20126935-20127131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
220-393
               

               
Cow position:
               
chr5:7676122-7675945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr5:12562727-12562540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr5:17987860-17987673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
220-412
               

               
Cow position:
               
chr5:71445423-71445628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
222-396
               

               
Cow position:
               
chr5:62995992-62996175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
222-400
               

               
Cow position:
               
chr5:29172022-29172211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
224-390
               

               
Cow position:
               
chr5:70189109-70189287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
226-402
               

               
Cow position:
               
chr5:6876929-6876743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
226-428
               

               
Cow position:
               
chr5:28881653-28881436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 191
               

               
Conread position:
               
227-400
               

               
Cow position:
               
chr5:24915487-24915305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
227-428
               

               
Cow position:
               
chr5:43465565-43465775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
227-430
               

               
Cow position:
               
chr5:48062077-48061863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 187
               

               
Conread position:
               
228-400
               

               
Cow position:
               
chr5:62011724-62011902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
229-394
               

               
Cow position:
               
chr5:53779199-53779369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
229-400
               

               
Cow position:
               
chr5:43839957-43839777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
230-397
               

               
Cow position:
               
chr5:69682306-69682130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
230-400
               

               
Cow position:
               
chr5:57556072-57556249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
232-409
               

               
Cow position:
               
chr5:7139788-7139612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
232-428
               

               
Cow position:
               
chr5:51012044-51012247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 199
               

               
Conread position:
               
235-393
               

               
Cow position:
               
chr5:65745717-65745555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
235-398
               

               
Cow position:
               
chr5:65140344-65140518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr5:45854539-45854721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
235-417
               

               
Cow position:
               
chr5:29979910-29979728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
235-428
               

               
Cow position:
               
chr5:64843923-64843723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 167
               

               
Conread position:
               
237-398
               

               
Cow position:
               
chr5:19052742-19052573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
237-400
               

               
Cow position:
               
chr5:30492744-30492571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
239-424
               

               
Cow position:
               
chr5:37253481-37253664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
244-402
               

               
Cow position:
               
chr5:57098470-57098636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
244-419
               

               
Cow position:
               
chr5:19561391-19561205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
245-371
               

               
Cow position:
               
chr5:38079428-38079565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
245-427
               

               
Cow position:
               
chr5:35235631-35235440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
246-400
               

               
Cow position:
               
chr5:59662999-59662837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr5:48819332-48819521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
247-440
               

               
Cow position:
               
chr5:15770395-15770192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
249-386
               

               
Cow position:
               
chr5:50525587-50525725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
249-409
               

               
Cow position:
               
chr5:60523794-60523956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
249-428
               

               
Cow position:
               
chr5:57447604-57447418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
252-400
               

               
Cow position:
               
chr5:54713000-54712848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
256-400
               

               
Cow position:
               
chr5:24108991-24108838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
265-400
               

               
Cow position:
               
chr5:58487453-58487593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
265-430
               

               
Cow position:
               
chr5:56624439-56624265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
274-427
               

               
Cow position:
               
chr5:56578793-56578948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.