Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E040103.5 |
| Conread position: | 100-447 |
| Cow position: | chr23:23177934-23177588 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 0 |
| Conread position: | 102-358 |
| Cow position: | chr23:23049548-23049294 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 102-385 |
| Cow position: | chr23:21180816-21180537 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 107-358 |
| Cow position: | chr23:23023002-23022752 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 107-443 |
| Cow position: | chr23:20551070-20551404 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 110-382 |
| Cow position: | chr23:23097029-23096762 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 443-723 |
| Cow position: | chr23:20551603-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 185, 70 |
| Conread position: | 443-723 |
| Cow position: | chr23:21180283-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-723 |
| Cow position: | chr23:23022455-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 443-723 |
| Cow position: | chr23:23049037-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-723 |
| Cow position: | chr23:23096505-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 57 |
| Conread position: | 447-723 |
| Cow position: | chr23:23177316-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 721-891 |
| Cow position: | chr23:23176142-23175972 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-998 |
| Cow position: | chr23:23048188-23047911 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-999 |
| Cow position: | chr23:20553184-20553462 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-999 |
| Cow position: | chr23:21000454-21000732 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-999 |
| Cow position: | chr23:21179119-21178841 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-999 |
| Cow position: | chr23:23021253-23020975 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-999 |
| Cow position: | chr23:23093772-23093494 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 722-1001 |
| Cow position: | chr23:24591581-24591858 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 86 |
| Conread position: | 774-988 |
| Cow position: | chr23:24252953-24252736 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1137-1322 |
| Cow position: | chr23:23174564-23174378 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 171, 84 |
Show alignments to all cow chromosomes.