Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E050093.5.5 |
| Conread position: | 1-140 |
| Cow position: | chr15:31522429-31522569 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-140 |
| Cow position: | chr15:31547710-31547843 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-140 |
| Cow position: | chr15:31619374-31619507 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 138-360 |
| Cow position: | chr15:31547969-31548191 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-361 |
| Cow position: | chr15:31537441-31537664 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31522684-31522908 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31531988-31532212 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31564199-31564423 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31573996-31574220 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31581582-31581806 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-362 |
| Cow position: | chr15:31619929-31620153 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-496 |
| Cow position: | chr15:31538536-31538670 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-500 |
| Cow position: | chr15:31523998-31524135 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 362-612 |
| Cow position: | chr15:31549093-31549344 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 362-612 |
| Cow position: | chr15:31582376-31582627 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 362-612 |
| Cow position: | chr15:31620716-31620960 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 220 |
| Conread position: | 675-882 |
| Cow position: | chr15:31549403-31549617 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 117, 179 |
| Conread position: | 684-875 |
| Cow position: | chr15:31582695-31582895 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 690-882 |
| Cow position: | chr15:31621034-31621236 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.