Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL01E070044.5
        

               Conread position:
               535-942
               

               Cow position:
               chr1:2000108-1999701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-983
               

               Cow position:
               chr1:2000170-1999744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               558-979
               

               Cow position:
               chr1:2000001-1999580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-822
               

               Cow position:
               chr1:1999645-1999400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               581-983
               

               Cow position:
               chr1:2000230-1999828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               641-972
               

               Cow position:
               chr1:1999750-1999419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 86
               

               Conread position:
               661-906
               

               Cow position:
               chr1:1999646-1999400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               730-983
               

               Cow position:
               chr1:2000249-1999996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.