Cow genome map
| Conread name: | Ss1.1-Spl1-SPL01E070044.5 |
| Conread position: | 1-110 |
| Cow position: | chr14:3153580-3153689 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-984 |
| Cow position: | chr14:3154986-3155838 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 696 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 404-984 |
| Cow position: | chr14:25895632-25896215 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 358 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 406-944 |
| Cow position: | chr14:25859368-25859909 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 406-983 |
| Cow position: | chr14:3061557-3060977 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 214 |
| Conread position: | 407-877 |
| Cow position: | chr14:447774-448247 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 204 |
| Conread position: | 407-933 |
| Cow position: | chr14:25876756-25877285 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 81 |
| Conread position: | 407-978 |
| Cow position: | chr14:25836652-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 407-978 |
| Cow position: | chr14:25860209-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 407-981 |
| Cow position: | chr14:25783529-25784106 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 385 |
| Conread position: | 407-981 |
| Cow position: | chr14:25836232-25836809 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 407-981 |
| Cow position: | chr14:25836484-25837061 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 384 |
| Conread position: | 407-981 |
| Cow position: | chr14:25876672-25877249 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 126 |
| Conread position: | 407-981 |
| Cow position: | chr14:25877008-25877585 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 407-981 |
| Cow position: | chr14:25877260-25877837 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 407-983 |
| Cow position: | chr14:25836148-25836727 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 128 |
| Conread position: | 407-983 |
| Cow position: | chr14:25859873-25860452 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 343 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 407-983 |
| Cow position: | chr14:25877092-25877671 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 416-930 |
| Cow position: | chr14:25795156-25794639 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 184 |
| Conread position: | 447-981 |
| Cow position: | chr14:25783737-25784274 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 465-983 |
| Cow position: | chr14:3128119-3127594 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 150 |
| Conread position: | 468-979 |
| Cow position: | chr14:680217-680731 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 388 |
| Conread position: | 475-983 |
| Cow position: | chr14:3101335-3100829 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 476-981 |
| Cow position: | chr14:25783934-25784442 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 477-932 |
| Cow position: | chr14:25910834-25911292 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 314 |
| Conread position: | 477-981 |
| Cow position: | chr14:25859691-25860198 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 477-981 |
| Cow position: | chr14:25860195-25860702 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 381 |
| Conread position: | 477-983 |
| Cow position: | chr14:3128019-3127510 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 533-981 |
| Cow position: | chr14:25794784-25794336 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 533-983 |
| Cow position: | chr14:447735-448185 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 86 |
| Conread position: | 533-983 |
| Cow position: | chr14:680201-680651 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 535-848 |
| Cow position: | chr14:25784416-25784729 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 535-886 |
| Cow position: | chr14:3127622-3127271 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 535-933 |
| Cow position: | chr14:25835943-25836341 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 535-975 |
| Cow position: | chr14:25794866-25794426 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 535-981 |
| Cow position: | chr14:25783324-25783770 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 330, 337 |
| Conread position: | 535-981 |
| Cow position: | chr14:25784080-25784526 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 535-983 |
| Cow position: | chr14:25876971-25877419 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 323, 318 |
| Conread position: | 536-735 |
| Cow position: | chr14:25877644-25877843 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-902 |
| Cow position: | chr14:3080025-3079657 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 536-969 |
| Cow position: | chr14:3127705-3127272 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-969 |
| Cow position: | chr14:3156047-3156480 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 244 |
| Conread position: | 536-981 |
| Cow position: | chr14:680708-681153 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 536-983 |
| Cow position: | chr14:3080697-3080250 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 536-983 |
| Cow position: | chr14:3101438-3100995 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 228, 106 |
| Conread position: | 536-983 |
| Cow position: | chr14:3155963-3156410 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 537-939 |
| Cow position: | chr14:3100771-3100369 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 544-983 |
| Cow position: | chr14:3080857-3080418 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 64 |
| Conread position: | 552-983 |
| Cow position: | chr14:447670-448101 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 553-728 |
| Cow position: | chr14:3156559-3156734 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 553-815 |
| Cow position: | chr14:420641-420903 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-938 |
| Cow position: | chr14:25910588-25910962 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 320, 139 |
| Conread position: | 553-942 |
| Cow position: | chr14:25835709-25836098 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 223, 233 |
| Conread position: | 553-943 |
| Cow position: | chr14:25859686-25860076 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 553-981 |
| Cow position: | chr14:25910749-25911173 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 222, 41 |
| Conread position: | 553-983 |
| Cow position: | chr14:3100921-3100493 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 49 |
| Conread position: | 553-983 |
| Cow position: | chr14:3128108-3127678 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 556-812 |
| Cow position: | chr14:25896123-25896379 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-933 |
| Cow position: | chr14:25795433-25795056 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 149, 132 |
| Conread position: | 556-937 |
| Cow position: | chr14:25859941-25860322 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 302, 297 |
| Conread position: | 556-944 |
| Cow position: | chr14:25836552-25836940 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-948 |
| Cow position: | chr14:25859269-25859661 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 317, 310 |
| Conread position: | 556-979 |
| Cow position: | chr14:680392-680815 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 556-981 |
| Cow position: | chr14:25836720-25837145 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-981 |
| Cow position: | chr14:25859353-25859778 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 229 |
| Conread position: | 556-981 |
| Cow position: | chr14:25876320-25876745 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 106 |
| Conread position: | 556-981 |
| Cow position: | chr14:25876572-25876997 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 556-981 |
| Cow position: | chr14:25877328-25877753 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 299 |
| Conread position: | 556-981 |
| Cow position: | chr14:25895703-25896128 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 131 |
| Conread position: | 556-983 |
| Cow position: | chr14:3080173-3079746 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 556-983 |
| Cow position: | chr14:3127769-3127342 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 289 |
| Conread position: | 556-983 |
| Cow position: | chr14:25835796-25836223 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 93 |
| Conread position: | 556-983 |
| Cow position: | chr14:25894947-25895374 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 556-984 |
| Cow position: | chr14:680476-680904 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 158 |
| Conread position: | 557-888 |
| Cow position: | chr14:3156152-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 557-903 |
| Cow position: | chr14:25783514-25783860 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 308, 315 |
| Conread position: | 557-935 |
| Cow position: | chr14:680897-681275 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-942 |
| Cow position: | chr14:25876657-25877042 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 140 |
| Conread position: | 557-961 |
| Cow position: | chr14:3100835-3100431 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 557-966 |
| Cow position: | chr14:25784270-25784679 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 557-969 |
| Cow position: | chr14:3061067-3060655 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 557-971 |
| Cow position: | chr14:447843-448257 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 557-979 |
| Cow position: | chr14:3061319-3060897 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 557-979 |
| Cow position: | chr14:3080088-3079666 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-980 |
| Cow position: | chr14:680561-680984 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 557-981 |
| Cow position: | chr14:3080424-3080000 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 557-981 |
| Cow position: | chr14:25783766-25784190 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 557-981 |
| Cow position: | chr14:25784186-25784610 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 557-981 |
| Cow position: | chr14:25836049-25836473 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-981 |
| Cow position: | chr14:25836469-25836893 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 557-981 |
| Cow position: | chr14:25895284-25895708 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 231, 214 |
| Conread position: | 557-981 |
| Cow position: | chr14:25895452-25895876 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 324, 309 |
| Conread position: | 557-981 |
| Cow position: | chr14:25895872-25896296 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-981 |
| Cow position: | chr14:25910833-25911257 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 219, 228 |
| Conread position: | 557-982 |
| Cow position: | chr14:433980-434405 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 557-983 |
| Cow position: | chr14:433896-434322 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 557-983 |
| Cow position: | chr14:447591-448017 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 557-983 |
| Cow position: | chr14:3061151-3060725 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 557-983 |
| Cow position: | chr14:3061235-3060809 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 557-983 |
| Cow position: | chr14:3061571-3061145 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr14:3061655-3061229 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 557-983 |
| Cow position: | chr14:3061739-3061313 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 393 |
| Conread position: | 557-983 |
| Cow position: | chr14:3080256-3079830 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr14:3080340-3079914 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr14:3080508-3080082 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 557-983 |
| Cow position: | chr14:3080592-3080166 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 297 |
| Conread position: | 557-983 |
| Cow position: | chr14:3080760-3080334 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 557-983 |
| Cow position: | chr14:3127852-3127426 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 557-983 |
| Cow position: | chr14:3155900-3156326 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr14:25860194-25860620 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 557-983 |
| Cow position: | chr14:25895032-25895458 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 273 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 399, 393 |
| Conread position: | 557-983 |
| Cow position: | chr14:25895200-25895626 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-983 |
| Cow position: | chr14:25895620-25896046 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 214 |
| Conread position: | 557-984 |
| Cow position: | chr14:680813-681240 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 557-984 |
| Cow position: | chr14:25895956-25896383 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-943 |
| Cow position: | chr14:25836134-25836519 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-981 |
| Cow position: | chr14:25859187-25859610 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 558-982 |
| Cow position: | chr14:25876490-25876914 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 559-812 |
| Cow position: | chr14:25794422-25794168 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 559-981 |
| Cow position: | chr14:433814-434236 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 559-983 |
| Cow position: | chr14:680647-681071 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 559-983 |
| Cow position: | chr14:25795094-25794670 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 388, 376 |
| Conread position: | 559-983 |
| Cow position: | chr14:25795262-25794838 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 206, 220 |
| Conread position: | 560-734 |
| Cow position: | chr14:25794336-25794162 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 566-983 |
| Cow position: | chr14:3128179-3127762 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 135 |
| Conread position: | 568-981 |
| Cow position: | chr14:25783441-25783854 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 568-981 |
| Cow position: | chr14:25876416-25876829 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 572-803 |
| Cow position: | chr14:3060884-3060653 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 572-983 |
| Cow position: | chr14:3080913-3080502 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 578-983 |
| Cow position: | chr14:3080991-3080586 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 587-948 |
| Cow position: | chr14:25835911-25836272 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 602-981 |
| Cow position: | chr14:25894828-25895204 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 611-975 |
| Cow position: | chr14:25795462-25795098 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 169, 153 |
| Conread position: | 612-983 |
| Cow position: | chr14:25894919-25895290 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 250, 234 |
| Conread position: | 617-983 |
| Cow position: | chr14:3081037-3080670 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 617-983 |
| Cow position: | chr14:3101441-3101076 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 159, 109 |
| Conread position: | 618-969 |
| Cow position: | chr14:447568-447919 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 237 |
| Conread position: | 628-948 |
| Cow position: | chr14:25859173-25859493 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 152, 147 |
| Conread position: | 632-932 |
| Cow position: | chr14:663410-663110 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 220, 232 |
| Conread position: | 638-979 |
| Cow position: | chr14:3061742-3061401 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 235 |
| Conread position: | 702-983 |
| Cow position: | chr14:433873-434154 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 156, 152 |
| Conread position: | 702-984 |
| Cow position: | chr14:447568-447850 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 153 |
| Conread position: | 716-983 |
| Cow position: | chr14:663410-663143 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 722-983 |
| Cow position: | chr14:433809-434070 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 722-983 |
| Cow position: | chr14:3061742-3061481 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.