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Cow genome map

           
Conread name:
           
Ss1.1-Spl1-SPL01E070044.5
        

               
Conread position:
               
388-983
               

               
Cow position:
               
chr18:42693883-42693283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
397-984
               

               
Cow position:
               
chr18:50059279-50058689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 164
               

               
Conread position:
               
404-981
               

               
Cow position:
               
chr18:33093091-33092511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
405-936
               

               
Cow position:
               
chr18:50058935-50058403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
406-942
               

               
Cow position:
               
chr18:33064249-33063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
406-981
               

               
Cow position:
               
chr18:51400381-51400959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
406-983
               

               
Cow position:
               
chr18:33064753-33064173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
406-983
               

               
Cow position:
               
chr18:44398254-44397674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
407-763
               

               
Cow position:
               
chr18:43048710-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
407-805
               

               
Cow position:
               
chr18:51789119-51788718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
407-813
               

               
Cow position:
               
chr18:44184364-44183955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
119, 150
               

               
Conread position:
               
407-819
               

               
Cow position:
               
chr18:43174918-43174503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
129, 150
               

               
Conread position:
               
407-848
               

               
Cow position:
               
chr18:44253873-44253429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
407-863
               

               
Cow position:
               
chr18:51874242-51874699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
407-864
               

               
Cow position:
               
chr18:42984954-42984494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
407-864
               

               
Cow position:
               
chr18:44240363-44240823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
407-865
               

               
Cow position:
               
chr18:51812362-51811903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
407-942
               

               
Cow position:
               
chr18:51789539-51789001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
116, 141
               

               
Conread position:
               
407-960
               

               
Cow position:
               
chr18:51812530-51811974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
407-970
               

               
Cow position:
               
chr18:41948826-41948262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 154
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:41197929-41198506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:41949078-41948501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 376
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:42744531-42743954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 469
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:42744615-42744038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:42837750-42837173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 364
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:44154013-44153455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51765980-51765403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 206
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51789623-51789046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51789791-51789214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51812614-51812037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 150
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51812782-51812205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:51812950-51812373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:52428155-52428732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 150
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:52428407-52428984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 133
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:52433336-52433913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 150
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:52433588-52434165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 133
               

               
Conread position:
               
407-981
               

               
Cow position:
               
chr18:52447714-52448292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 150
               

               
Conread position:
               
407-983
               

               
Cow position:
               
chr18:43093652-43093073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
116, 210
               

               
Conread position:
               
407-983
               

               
Cow position:
               
chr18:51368585-51368005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 350
               

               
Conread position:
               
407-983
               

               
Cow position:
               
chr18:52447294-52447873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 150
               

               
Conread position:
               
411-981
               

               
Cow position:
               
chr18:51368328-51367756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 146
               

               
Conread position:
               
411-983
               

               
Cow position:
               
chr18:42675299-42674724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 204
               

               
Conread position:
               
412-983
               

               
Cow position:
               
chr18:49032855-49032281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
415-981
               

               
Cow position:
               
chr18:52446966-52447535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
415-981
               

               
Cow position:
               
chr18:52447386-52447955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
415-983
               

               
Cow position:
               
chr18:52447134-52447705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
416-848
               

               
Cow position:
               
chr18:42959852-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
416-903
               

               
Cow position:
               
chr18:52428500-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
416-903
               

               
Cow position:
               
chr18:52433681-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
416-961
               

               
Cow position:
               
chr18:44253289-44252752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
416-978
               

               
Cow position:
               
chr18:52433177-52433742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
416-980
               

               
Cow position:
               
chr18:50848782-50849349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
416-980
               

               
Cow position:
               
chr18:52427912-52428479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
416-980
               

               
Cow position:
               
chr18:52433261-52433828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 105
               

               
Conread position:
               
416-981
               

               
Cow position:
               
chr18:43120296-43119728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
439-980
               

               
Cow position:
               
chr18:52427767-52428311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
439-980
               

               
Cow position:
               
chr18:52433116-52433660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
447-948
               

               
Cow position:
               
chr18:42674927-42674423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 427
               

               
Conread position:
               
447-980
               

               
Cow position:
               
chr18:52428111-52428647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
447-981
               

               
Cow position:
               
chr18:52428363-52428900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
447-981
               

               
Cow position:
               
chr18:52433544-52434081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
450-950
               

               
Cow position:
               
chr18:50848980-50849488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
459-943
               

               
Cow position:
               
chr18:50022589-50022098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
468-981
               

               
Cow position:
               
chr18:43175277-43174761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 396
               

               
Conread position:
               
473-982
               

               
Cow position:
               
chr18:51367764-51367251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
474-983
               

               
Cow position:
               
chr18:49033128-49032617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
475-984
               

               
Cow position:
               
chr18:42837849-42837338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
477-894
               

               
Cow position:
               
chr18:50246417-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
477-948
               

               
Cow position:
               
chr18:42959875-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
477-975
               

               
Cow position:
               
chr18:51789301-51788800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
477-979
               

               
Cow position:
               
chr18:44398015-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
477-981
               

               
Cow position:
               
chr18:44398351-44397844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
477-981
               

               
Cow position:
               
chr18:49032958-49032451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
477-981
               

               
Cow position:
               
chr18:51400536-51401043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
477-983
               

               
Cow position:
               
chr18:52447532-52448041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
477-983
               

               
Cow position:
               
chr18:56316305-56316814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
478-983
               

               
Cow position:
               
chr18:33093101-33092593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
527-938
               

               
Cow position:
               
chr18:42791023-42791432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
530-981
               

               
Cow position:
               
chr18:14454044-14453593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 324
               

               
Conread position:
               
531-929
               

               
Cow position:
               
chr18:51368121-51367724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
532-896
               

               
Cow position:
               
chr18:50083932-50084299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
532-922
               

               
Cow position:
               
chr18:53559988-53560378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
532-931
               

               
Cow position:
               
chr18:50099877-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
532-983
               

               
Cow position:
               
chr18:56329705-56329254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 341
               

               
Conread position:
               
532-984
               

               
Cow position:
               
chr18:56128687-56129138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
533-794
               

               
Cow position:
               
chr18:44253660-44253399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
533-859
               

               
Cow position:
               
chr18:51367532-51367206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
533-903
               

               
Cow position:
               
chr18:33063951-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
318, 325
               

               
Conread position:
               
533-933
               

               
Cow position:
               
chr18:43119924-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
533-944
               

               
Cow position:
               
chr18:54993048-54993462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
533-948
               

               
Cow position:
               
chr18:42791195-42791610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
533-974
               

               
Cow position:
               
chr18:53560325-53560766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
533-978
               

               
Cow position:
               
chr18:50848482-50848927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:41197554-41198002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:41197722-41198170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:42827467-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:42985413-42984965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:43093355-43092907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:43168023-43168471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:50059056-50058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
533-981
               

               
Cow position:
               
chr18:51789326-51788878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
534-899
               

               
Cow position:
               
chr18:42724272-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
534-933
               

               
Cow position:
               
chr18:40086450-40086053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
324, 241
               

               
Conread position:
               
534-980
               

               
Cow position:
               
chr18:42960067-42959630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
534-980
               

               
Cow position:
               
chr18:42985244-42984798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 147
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:40324400-40323953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:42985160-42984713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:43120007-43119560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:44239905-44240352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:44240157-44240604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
534-981
               

               
Cow position:
               
chr18:51400344-51400791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 418
               

               
Conread position:
               
534-983
               

               
Cow position:
               
chr18:40324736-40324287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
534-983
               

               
Cow position:
               
chr18:43022923-43022474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
534-983
               

               
Cow position:
               
chr18:56128101-56128550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 320
               

               
Conread position:
               
535-735
               

               
Cow position:
               
chr18:43053394-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr18:40324147-40323914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-774
               

               
Cow position:
               
chr18:44253574-44253336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
535-794
               

               
Cow position:
               
chr18:43022250-43021991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-804
               

               
Cow position:
               
chr18:42744064-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-805
               

               
Cow position:
               
chr18:14453139-14452869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
245, 240
               

               
Conread position:
               
535-852
               

               
Cow position:
               
chr18:40085955-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
535-887
               

               
Cow position:
               
chr18:43168193-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-896
               

               
Cow position:
               
chr18:50048654-50048298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
535-903
               

               
Cow position:
               
chr18:56248176-56247816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
535-923
               

               
Cow position:
               
chr18:53610066-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
171, 166
               

               
Conread position:
               
535-931
               

               
Cow position:
               
chr18:50059306-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
535-932
               

               
Cow position:
               
chr18:42791113-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
535-932
               

               
Cow position:
               
chr18:50099628-50100025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
535-932
               

               
Cow position:
               
chr18:50245974-50246371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
535-932
               

               
Cow position:
               
chr18:50271610-50272007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-932
               

               
Cow position:
               
chr18:50848736-50849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-940
               

               
Cow position:
               
chr18:53498541-53498947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
535-942
               

               
Cow position:
               
chr18:50059474-50059067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
535-944
               

               
Cow position:
               
chr18:50295253-50295662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
535-945
               

               
Cow position:
               
chr18:53635811-53635401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
535-948
               

               
Cow position:
               
chr18:53635391-53634979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
535-948
               

               
Cow position:
               
chr18:54967184-54967597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
535-968
               

               
Cow position:
               
chr18:50083851-50084284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-980
               

               
Cow position:
               
chr18:50022338-50021890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
535-980
               

               
Cow position:
               
chr18:50030920-50030470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
535-980
               

               
Cow position:
               
chr18:52428118-52428563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-980
               

               
Cow position:
               
chr18:52428370-52428815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-980
               

               
Cow position:
               
chr18:52433551-52433996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:33064537-33064091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 338
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:33064789-33064343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 67
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:41949199-41948753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:41949283-41948837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42675004-42674558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 238
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42675088-42674642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42744733-42744290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42791701-42792147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 251
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42837703-42837257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 317
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42837871-42837425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42837955-42837509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:42959898-42959461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:43174955-43174509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:43175123-43174677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:43175459-43175013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:43175543-43175097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:44184485-44184039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:44184737-44184291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:44184905-44184459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50021999-50021550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50049074-50048628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50083431-50083877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
404, 412
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50083683-50084129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50099712-50100158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
327, 309
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50271694-50272140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50295421-50295867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:50848820-50849266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:52427950-52428396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:52433131-52433577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:52447761-52448207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
535-981
               

               
Cow position:
               
chr18:56128354-56128800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
535-982
               

               
Cow position:
               
chr18:55018029-55018476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
535-983
               

               
Cow position:
               
chr18:42792121-42792569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
535-983
               

               
Cow position:
               
chr18:50848568-50849016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
535-983
               

               
Cow position:
               
chr18:54979793-54980241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
535-983
               

               
Cow position:
               
chr18:55008708-55009156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
535-984
               

               
Cow position:
               
chr18:42693395-42692946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
536-794
               

               
Cow position:
               
chr18:42674667-42674409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
536-794
               

               
Cow position:
               
chr18:50058633-50058377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
536-819
               

               
Cow position:
               
chr18:55524046-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
536-856
               

               
Cow position:
               
chr18:50048905-50048585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
536-899
               

               
Cow position:
               
chr18:55066708-55066345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
536-900
               

               
Cow position:
               
chr18:55008961-55009325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 151
               

               
Conread position:
               
536-924
               

               
Cow position:
               
chr18:55523542-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
536-933
               

               
Cow position:
               
chr18:56247498-56247108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
536-936
               

               
Cow position:
               
chr18:40324650-40324250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
536-936
               

               
Cow position:
               
chr18:51839243-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
536-938
               

               
Cow position:
               
chr18:50246143-50246545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
536-942
               

               
Cow position:
               
chr18:53498377-53498780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
341, 64
               

               
Conread position:
               
536-943
               

               
Cow position:
               
chr18:49022880-49023287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
536-948
               

               
Cow position:
               
chr18:43168110-43168522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
536-959
               

               
Cow position:
               
chr18:50281908-50282331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-960
               

               
Cow position:
               
chr18:55523710-55524134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
327, 314
               

               
Conread position:
               
536-970
               

               
Cow position:
               
chr18:14453954-14453520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 256
               

               
Conread position:
               
536-977
               

               
Cow position:
               
chr18:55067044-55066603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
536-980
               

               
Cow position:
               
chr18:44398373-44397929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:33064368-33063923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:40074921-40075366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:42791870-42792315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:42984990-42984545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:44240075-44240520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:49033148-49032703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:50083516-50083961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
536-981
               

               
Cow position:
               
chr18:51752185-51751740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
536-982
               

               
Cow position:
               
chr18:33064032-33063586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
230, 242
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:33064452-33064005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:33064872-33064425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:41949030-41948583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:52012377-52011930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:53559740-53560187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:53559824-53560271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:54993306-54993753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
235, 223
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:55066960-55066513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:55523878-55524325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
228, 238
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:56128439-56128886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:56316115-56316562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:56316199-56316646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
536-983
               

               
Cow position:
               
chr18:56329365-56328918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 318
               

               
Conread position:
               
537-924
               

               
Cow position:
               
chr18:22634623-22635010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
537-981
               

               
Cow position:
               
chr18:50059556-50059112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
537-981
               

               
Cow position:
               
chr18:56247662-56247226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
538-981
               

               
Cow position:
               
chr18:33064954-33064511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 313
               

               
Conread position:
               
539-759
               

               
Cow position:
               
chr18:44153647-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
539-919
               

               
Cow position:
               
chr18:50058882-50058502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
539-983
               

               
Cow position:
               
chr18:49033397-49032953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
540-858
               

               
Cow position:
               
chr18:50022078-50021760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
542-981
               

               
Cow position:
               
chr18:42724850-42724413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
226, 8
               

               
Conread position:
               
545-981
               

               
Cow position:
               
chr18:40324893-40324457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
114, 118
               

               
Conread position:
               
549-981
               

               
Cow position:
               
chr18:44398447-44398012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 326
               

               
Conread position:
               
549-983
               

               
Cow position:
               
chr18:33065112-33064677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
550-983
               

               
Cow position:
               
chr18:56316045-56316478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 225
               

               
Conread position:
               
550-984
               

               
Cow position:
               
chr18:49021563-49021997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
551-927
               

               
Cow position:
               
chr18:54966945-54967324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
6, 289
               

               
Conread position:
               
551-934
               

               
Cow position:
               
chr18:1418166-1418550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
551-981
               

               
Cow position:
               
chr18:50098974-50099402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
383, 19
               

               
Conread position:
               
552-848
               

               
Cow position:
               
chr18:54980314-54980609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
552-923
               

               
Cow position:
               
chr18:53525690-53526061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
299, 320
               

               
Conread position:
               
552-924
               

               
Cow position:
               
chr18:54993574-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
552-974
               

               
Cow position:
               
chr18:55066776-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 60
               

               
Conread position:
               
552-979
               

               
Cow position:
               
chr18:53509236-53509663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
299, 320
               

               
Conread position:
               
552-983
               

               
Cow position:
               
chr18:53497970-53498404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
552-983
               

               
Cow position:
               
chr18:56247816-56247390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
552-984
               

               
Cow position:
               
chr18:42985562-42985130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
552-984
               

               
Cow position:
               
chr18:43023073-43022641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
553-765
               

               
Cow position:
               
chr18:51765159-51764947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
152, 147
               

               
Conread position:
               
553-783
               

               
Cow position:
               
chr18:53560597-53560823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
553-794
               

               
Cow position:
               
chr18:56494263-56494503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
553-804
               

               
Cow position:
               
chr18:42792643-42792894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-819
               

               
Cow position:
               
chr18:52448115-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
553-840
               

               
Cow position:
               
chr18:22634891-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
553-852
               

               
Cow position:
               
chr18:54967370-54967669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
553-894
               

               
Cow position:
               
chr18:40075358-40075699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
553-896
               

               
Cow position:
               
chr18:41198414-41198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
295, 310
               

               
Conread position:
               
553-896
               

               
Cow position:
               
chr18:42792559-42792902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-897
               

               
Cow position:
               
chr18:55018467-55018812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
553-898
               

               
Cow position:
               
chr18:54968205-54968550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 143
               

               
Conread position:
               
553-900
               

               
Cow position:
               
chr18:56434296-56434643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
553-902
               

               
Cow position:
               
chr18:53586328-53585980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
553-903
               

               
Cow position:
               
chr18:43094078-43093729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
220, 52
               

               
Conread position:
               
553-921
               

               
Cow position:
               
chr18:54993239-54993607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
218, 206
               

               
Conread position:
               
553-924
               

               
Cow position:
               
chr18:54967703-54968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
553-924
               

               
Cow position:
               
chr18:55017879-55018250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
553-924
               

               
Cow position:
               
chr18:55018215-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
218, 206
               

               
Conread position:
               
553-924
               

               
Cow position:
               
chr18:55018299-55018670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
553-925
               

               
Cow position:
               
chr18:54967871-54968241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
553-925
               

               
Cow position:
               
chr18:54980063-54980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 134
               

               
Conread position:
               
553-930
               

               
Cow position:
               
chr18:40306588-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
553-930
               

               
Cow position:
               
chr18:54980231-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
553-932
               

               
Cow position:
               
chr18:40306252-40306631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
553-932
               

               
Cow position:
               
chr18:54967034-54967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
553-933
               

               
Cow position:
               
chr18:53498052-53498438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
244, 303
               

               
Conread position:
               
553-933
               

               
Cow position:
               
chr18:53560093-53560473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
553-935
               

               
Cow position:
               
chr18:54968121-54968503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
553-935
               

               
Cow position:
               
chr18:54979643-54980025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
553-938
               

               
Cow position:
               
chr18:54967118-54967503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
553-939
               

               
Cow position:
               
chr18:54968037-54968423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
553-939
               

               
Cow position:
               
chr18:55008894-55009280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
553-940
               

               
Cow position:
               
chr18:53509657-53510043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
553-942
               

               
Cow position:
               
chr18:56494095-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-957
               

               
Cow position:
               
chr18:40075190-40075594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-959
               

               
Cow position:
               
chr18:53509573-53509979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
553-961
               

               
Cow position:
               
chr18:53586412-53586004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
553-961
               

               
Cow position:
               
chr18:56316552-56316960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
553-969
               

               
Cow position:
               
chr18:49021734-49022151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
553-970
               

               
Cow position:
               
chr18:43093251-43092834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
553-973
               

               
Cow position:
               
chr18:49032459-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
553-974
               

               
Cow position:
               
chr18:54992735-54993156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
553-975
               

               
Cow position:
               
chr18:53586916-53586494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 307
               

               
Conread position:
               
553-975
               

               
Cow position:
               
chr18:56493927-56494349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
553-978
               

               
Cow position:
               
chr18:54979559-54979984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
146, 132
               

               
Conread position:
               
553-978
               

               
Cow position:
               
chr18:54992903-54993328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
553-978
               

               
Cow position:
               
chr18:54993407-54993832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
553-978
               

               
Cow position:
               
chr18:55523643-55524068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
305, 297
               

               
Conread position:
               
553-980
               

               
Cow position:
               
chr18:52427548-52427975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
309, 319
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:40306840-40307268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:41197826-41198254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
316, 301
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:41198246-41198674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:42792223-42792651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 224
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:42827403-42827831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:42960300-42959872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
127, 134
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:43022652-43022224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:43093671-43093243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 137
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:43093911-43093495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:44253892-44253464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:49033299-49032871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:50099310-50099738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:50246076-50246504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
383, 392
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:51765411-51764983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:51789558-51789130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
305, 298
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:51969592-51970009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:52432897-52433325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
309, 319
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:52447695-52448123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 319
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:53610468-53610040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 404
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:54993155-54993583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
553-981
               

               
Cow position:
               
chr18:55067111-55066683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
553-982
               

               
Cow position:
               
chr18:50848250-50848679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:1418001-1418431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:40306420-40306850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:40306756-40307186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:40324465-40324035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 217
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:42724757-42724327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:53498220-53498653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:53560177-53560607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:53636045-53635615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:54979979-54980409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 134
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:55523391-55523821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
305, 301
               

               
Conread position:
               
553-983
               

               
Cow position:
               
chr18:56434053-56434474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
280, 38
               

               
Conread position:
               
554-981
               

               
Cow position:
               
chr18:41198163-41198590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
555-903
               

               
Cow position:
               
chr18:55523981-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
555-931
               

               
Cow position:
               
chr18:50049226-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
555-938
               

               
Cow position:
               
chr18:50271462-50271845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 138
               

               
Conread position:
               
555-953
               

               
Cow position:
               
chr18:43167541-43167939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
173, 167
               

               
Conread position:
               
556-849
               

               
Cow position:
               
chr18:42744127-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-885
               

               
Cow position:
               
chr18:50021723-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
556-891
               

               
Cow position:
               
chr18:51839475-51839140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
556-891
               

               
Cow position:
               
chr18:56267458-56267122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
556-891
               

               
Cow position:
               
chr18:56329177-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
556-927
               

               
Cow position:
               
chr18:55523478-55523849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-930
               

               
Cow position:
               
chr18:50030815-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 301
               

               
Conread position:
               
556-930
               

               
Cow position:
               
chr18:50099229-50099603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
556-930
               

               
Cow position:
               
chr18:51367593-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
556-930
               

               
Cow position:
               
chr18:56434215-56434589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
556-931
               

               
Cow position:
               
chr18:50058949-50058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
556-931
               

               
Cow position:
               
chr18:50099397-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
556-943
               

               
Cow position:
               
chr18:50022149-50021759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
556-948
               

               
Cow position:
               
chr18:53498479-53498873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
556-948
               

               
Cow position:
               
chr18:53560432-53560820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
556-954
               

               
Cow position:
               
chr18:14453850-14453452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-961
               

               
Cow position:
               
chr18:50849009-50849414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
556-969
               

               
Cow position:
               
chr18:50246415-50246828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
556-969
               

               
Cow position:
               
chr18:56329513-56329100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-978
               

               
Cow position:
               
chr18:42693626-42693205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
394, 0
               

               
Conread position:
               
556-978
               

               
Cow position:
               
chr18:53560264-53560686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
556-979
               

               
Cow position:
               
chr18:51400702-51401125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
556-980
               

               
Cow position:
               
chr18:40306507-40306931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:40324546-40324121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
297, 308
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:40324798-40324373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 188
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:42675319-42674894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:42791974-42792399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:42792478-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
220, 224
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:43093584-43093159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:43167794-43168219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:44239759-44240184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
177, 184
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:49022816-49023241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:50099061-50099486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
380, 398
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:50099481-50099906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:50099565-50099990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
556-981
               

               
Cow position:
               
chr18:50271547-50271972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:40306675-40307102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:42792310-42792737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:49032960-49032533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 317
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:49033212-49032785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:50059369-50058942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:50281760-50282187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:52012273-52011846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 297
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:53509324-53509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:53525778-53526205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 52
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:53586829-53586402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:53635958-53635531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:55066856-55066429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 297
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:56330101-56329674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 299
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:56330185-56329758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 317
               

               
Conread position:
               
556-983
               

               
Cow position:
               
chr18:56494014-56494441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 298
               

               
Conread position:
               
556-984
               

               
Cow position:
               
chr18:53526030-53526456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
557-804
               

               
Cow position:
               
chr18:40307096-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-804
               

               
Cow position:
               
chr18:49023069-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-829
               

               
Cow position:
               
chr18:1418341-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
557-890
               

               
Cow position:
               
chr18:50282013-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
557-892
               

               
Cow position:
               
chr18:42837429-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
557-900
               

               
Cow position:
               
chr18:56391176-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
557-901
               

               
Cow position:
               
chr18:56316724-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
557-902
               

               
Cow position:
               
chr18:50030644-50030301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 221
               

               
Conread position:
               
557-903
               

               
Cow position:
               
chr18:14453201-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 230
               

               
Conread position:
               
557-926
               

               
Cow position:
               
chr18:40086511-40086144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
557-928
               

               
Cow position:
               
chr18:52011936-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
557-930
               

               
Cow position:
               
chr18:40086177-40085812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
557-930
               

               
Cow position:
               
chr18:42837513-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-930
               

               
Cow position:
               
chr18:43022984-43022611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
125, 131
               

               
Conread position:
               
557-930
               

               
Cow position:
               
chr18:44239844-44240217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 131
               

               
Conread position:
               
557-933
               

               
Cow position:
               
chr18:50083789-50084165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
557-936
               

               
Cow position:
               
chr18:53525863-53526242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
211, 229
               

               
Conread position:
               
557-948
               

               
Cow position:
               
chr18:40086933-40086546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
217, 158
               

               
Conread position:
               
557-960
               

               
Cow position:
               
chr18:43048725-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-961
               

               
Cow position:
               
chr18:42792395-42792799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-961
               

               
Cow position:
               
chr18:49032539-49032135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 298
               

               
Conread position:
               
557-961
               

               
Cow position:
               
chr18:53509745-53510153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
282, 239
               

               
Conread position:
               
557-969
               

               
Cow position:
               
chr18:40306928-40307340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
557-970
               

               
Cow position:
               
chr18:14453285-14452872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
557-970
               

               
Cow position:
               
chr18:43022396-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
303, 316
               

               
Conread position:
               
557-970
               

               
Cow position:
               
chr18:44240432-44240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-975
               

               
Cow position:
               
chr18:41948841-41948423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 315
               

               
Conread position:
               
557-975
               

               
Cow position:
               
chr18:41949345-41948927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 212
               

               
Conread position:
               
557-975
               

               
Cow position:
               
chr18:43022732-43022314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 134
               

               
Conread position:
               
557-975
               

               
Cow position:
               
chr18:44154451-44154030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
557-975
               

               
Cow position:
               
chr18:44253804-44253386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
301, 287
               

               
Conread position:
               
557-977
               

               
Cow position:
               
chr18:42693961-42693541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
557-978
               

               
Cow position:
               
chr18:55497451-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
557-979
               

               
Cow position:
               
chr18:42724501-42724079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
557-979
               

               
Cow position:
               
chr18:50848170-50848592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 123
               

               
Conread position:
               
557-979
               

               
Cow position:
               
chr18:56329260-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
557-979
               

               
Cow position:
               
chr18:56330016-56329594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 222
               

               
Conread position:
               
557-980
               

               
Cow position:
               
chr18:44184379-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
557-980
               

               
Cow position:
               
chr18:44184547-44184124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
557-980
               

               
Cow position:
               
chr18:44398016-44397593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 315
               

               
Conread position:
               
557-980
               

               
Cow position:
               
chr18:50246332-50246755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
557-980
               

               
Cow position:
               
chr18:52427804-52428227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 300
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:1418089-1418513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 81
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:33064179-33063755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:33064263-33063839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 294
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:40086093-40085676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
208, 82
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:40306340-40306764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:41197914-41198338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:41198334-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:42675486-42675062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:42744630-42744206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:42960458-42960040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:42985053-42984629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 315
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:42985305-42984881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:43022564-43022140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 233
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:43167879-43168303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44154112-44153695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44154364-44153941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44184631-44184207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44240012-44240436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 380
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44240264-44240688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
308, 315
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:44240348-44240772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:50281845-50282269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:50848674-50849098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:53635453-53635030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
557-981
               

               
Cow position:
               
chr18:56329848-56329424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 397
               

               
Conread position:
               
557-982
               

               
Cow position:
               
chr18:49022483-49022906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
81, 86
               

               
Conread position:
               
557-982
               

               
Cow position:
               
chr18:53509409-53509834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 297
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:42744294-42743868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 233
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:43175017-43174591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:49022733-49023159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 138
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:49032623-49032197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 297
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:52012020-52011594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:52012104-52011678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:52012439-52012014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53586744-53586318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53610128-53609703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53610296-53609870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53610380-53609954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53635537-53635111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 296
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53635621-53635195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 396
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53635705-53635279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:53635873-53635447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 298
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:55497535-55497109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
211, 221
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56128208-56128634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56128292-56128718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56128544-56128970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 396
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56128628-56129054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 296
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56316304-56316730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56316472-56316898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56316640-56317066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56329428-56329002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 223
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56329596-56329170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 297
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56329764-56329338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 297
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56329932-56329506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
557-983
               

               
Cow position:
               
chr18:56391260-56390834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 129
               

               
Conread position:
               
557-984
               

               
Cow position:
               
chr18:40086601-40086170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 238
               

               
Conread position:
               
558-897
               

               
Cow position:
               
chr18:44184294-44183955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
315, 295
               

               
Conread position:
               
558-938
               

               
Cow position:
               
chr18:50049135-50048756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
558-975
               

               
Cow position:
               
chr18:43175268-43174851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
558-975
               

               
Cow position:
               
chr18:50281678-50282095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 135
               

               
Conread position:
               
558-980
               

               
Cow position:
               
chr18:52427637-52428059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
307, 296
               

               
Conread position:
               
558-980
               

               
Cow position:
               
chr18:52432986-52433408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
307, 297
               

               
Conread position:
               
558-981
               

               
Cow position:
               
chr18:42694044-42693621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
558-981
               

               
Cow position:
               
chr18:43120319-43119896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
218, 225
               

               
Conread position:
               
558-981
               

               
Cow position:
               
chr18:43175352-43174929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
558-981
               

               
Cow position:
               
chr18:50848423-50848846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
558-983
               

               
Cow position:
               
chr18:42693792-42693367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
558-983
               

               
Cow position:
               
chr18:42724584-42724159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
558-984
               

               
Cow position:
               
chr18:44254051-44253629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
558-984
               

               
Cow position:
               
chr18:49022650-49023076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
559-849
               

               
Cow position:
               
chr18:40324207-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
559-924
               

               
Cow position:
               
chr18:44253311-44252947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
217, 194
               

               
Conread position:
               
559-930
               

               
Cow position:
               
chr18:42791557-42791928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
559-961
               

               
Cow position:
               
chr18:52446945-52447347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 128
               

               
Conread position:
               
559-981
               

               
Cow position:
               
chr18:33093101-33092679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
559-981
               

               
Cow position:
               
chr18:43167965-43168387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
559-981
               

               
Cow position:
               
chr18:51839388-51838966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
230, 224
               

               
Conread position:
               
559-983
               

               
Cow position:
               
chr18:49022317-49022739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
559-983
               

               
Cow position:
               
chr18:50031061-50030638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
559-983
               

               
Cow position:
               
chr18:53586658-53586234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
559-983
               

               
Cow position:
               
chr18:55497617-55497193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
559-984
               

               
Cow position:
               
chr18:42724331-42723906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
353, 359
               

               
Conread position:
               
560-864
               

               
Cow position:
               
chr18:43022309-43022005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
560-925
               

               
Cow position:
               
chr18:44154025-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
304, 45
               

               
Conread position:
               
560-935
               

               
Cow position:
               
chr18:40075029-40075404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
560-936
               

               
Cow position:
               
chr18:50295194-50295570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
155, 147
               

               
Conread position:
               
560-978
               

               
Cow position:
               
chr18:40075112-40075531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
8, 169
               

               
Conread position:
               
560-978
               

               
Cow position:
               
chr18:41949090-41948672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
216, 230
               

               
Conread position:
               
560-980
               

               
Cow position:
               
chr18:53586573-53586153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
560-983
               

               
Cow position:
               
chr18:50295362-50295785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
376, 397
               

               
Conread position:
               
562-903
               

               
Cow position:
               
chr18:56434137-56434478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
197, 210
               

               
Conread position:
               
562-924
               

               
Cow position:
               
chr18:54979904-54980266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
562-983
               

               
Cow position:
               
chr18:53559934-53560355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
562-983
               

               
Cow position:
               
chr18:53586487-53586066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
562-983
               

               
Cow position:
               
chr18:55017804-55018225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
314, 298
               

               
Conread position:
               
562-983
               

               
Cow position:
               
chr18:56493852-56494273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
563-730
               

               
Cow position:
               
chr18:40075536-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
563-894
               

               
Cow position:
               
chr18:49021075-49021409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
157, 163
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr18:1418263-1418610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
563-974
               

               
Cow position:
               
chr18:53525953-53526364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
563-981
               

               
Cow position:
               
chr18:33065013-33064595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
563-981
               

               
Cow position:
               
chr18:51789884-51789466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
563-983
               

               
Cow position:
               
chr18:50848344-50848764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 134
               

               
Conread position:
               
563-983
               

               
Cow position:
               
chr18:53509499-53509919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
124, 115
               

               
Conread position:
               
563-983
               

               
Cow position:
               
chr18:53610542-53610122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 218
               

               
Conread position:
               
564-983
               

               
Cow position:
               
chr18:53587073-53586654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 309
               

               
Conread position:
               
566-969
               

               
Cow position:
               
chr18:55008571-55008974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
205, 187
               

               
Conread position:
               
566-980
               

               
Cow position:
               
chr18:42790976-42791390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
566-984
               

               
Cow position:
               
chr18:40306181-40306599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
567-848
               

               
Cow position:
               
chr18:43175670-43175398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
567-982
               

               
Cow position:
               
chr18:40075288-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
568-978
               

               
Cow position:
               
chr18:49021665-49022075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
379, 372
               

               
Conread position:
               
569-977
               

               
Cow position:
               
chr18:56493772-56494183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
571-979
               

               
Cow position:
               
chr18:56391414-56391006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
572-930
               

               
Cow position:
               
chr18:51839543-51839185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
572-980
               

               
Cow position:
               
chr18:52433084-52433492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
572-981
               

               
Cow position:
               
chr18:43175590-43175181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
572-981
               

               
Cow position:
               
chr18:51752233-51751824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
572-981
               

               
Cow position:
               
chr18:52427735-52428144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
367, 380
               

               
Conread position:
               
574-981
               

               
Cow position:
               
chr18:42675385-42674978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 122
               

               
Conread position:
               
578-849
               

               
Cow position:
               
chr18:55075112-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
578-931
               

               
Cow position:
               
chr18:53636104-53635751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
578-936
               

               
Cow position:
               
chr18:50048695-50048337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
578-939
               

               
Cow position:
               
chr18:56128061-56128422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
578-943
               

               
Cow position:
               
chr18:50059599-50059234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
578-948
               

               
Cow position:
               
chr18:53586975-53586605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
578-981
               

               
Cow position:
               
chr18:42791660-42792063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
578-981
               

               
Cow position:
               
chr18:43093727-43093327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
578-981
               

               
Cow position:
               
chr18:50083306-50083709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
578-981
               

               
Cow position:
               
chr18:50099839-50100242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
578-981
               

               
Cow position:
               
chr18:51752311-51751908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
578-983
               

               
Cow position:
               
chr18:50099167-50099572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
578-983
               

               
Cow position:
               
chr18:55523332-55523737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
578-983
               

               
Cow position:
               
chr18:56391323-56390918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
579-978
               

               
Cow position:
               
chr18:1417859-1418258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
316, 310
               

               
Conread position:
               
579-981
               

               
Cow position:
               
chr18:43167733-43168135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
579-983
               

               
Cow position:
               
chr18:42791829-42792233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
580-980
               

               
Cow position:
               
chr18:50048945-50048545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
580-981
               

               
Cow position:
               
chr18:50083392-50083793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 377
               

               
Conread position:
               
580-983
               

               
Cow position:
               
chr18:51969287-51969684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
581-933
               

               
Cow position:
               
chr18:53559701-53560053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
581-983
               

               
Cow position:
               
chr18:51400307-51400709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
283, 274
               

               
Conread position:
               
587-981
               

               
Cow position:
               
chr18:50271410-50271804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
184, 173
               

               
Conread position:
               
599-981
               

               
Cow position:
               
chr18:14453328-14452945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
603-812
               

               
Cow position:
               
chr18:51873749-51873958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
603-981
               

               
Cow position:
               
chr18:51400245-51400623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
605-933
               

               
Cow position:
               
chr18:50059656-50059328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
605-939
               

               
Cow position:
               
chr18:50031099-50030767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
252, 155
               

               
Conread position:
               
605-955
               

               
Cow position:
               
chr18:51874359-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
268, 261
               

               
Conread position:
               
606-981
               

               
Cow position:
               
chr18:44398552-44398180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
608-933
               

               
Cow position:
               
chr18:55018017-55018343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 243
               

               
Conread position:
               
608-983
               

               
Cow position:
               
chr18:49022616-49022991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
168, 172
               

               
Conread position:
               
610-979
               

               
Cow position:
               
chr18:56391459-56391090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 246
               

               
Conread position:
               
611-981
               

               
Cow position:
               
chr18:44184913-44184543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
178, 158
               

               
Conread position:
               
611-981
               

               
Cow position:
               
chr18:44239730-44240100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
262, 239
               

               
Conread position:
               
612-981
               

               
Cow position:
               
chr18:43023096-43022728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
164, 8
               

               
Conread position:
               
615-983
               

               
Cow position:
               
chr18:33065129-33064761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
616-938
               

               
Cow position:
               
chr18:54992714-54993036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
616-980
               

               
Cow position:
               
chr18:42790942-42791306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
166, 158
               

               
Conread position:
               
616-983
               

               
Cow position:
               
chr18:42694155-42693787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
618-981
               

               
Cow position:
               
chr18:44398459-44398096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
618-981
               

               
Cow position:
               
chr18:50098955-50099318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
314, 322
               

               
Conread position:
               
618-981
               

               
Cow position:
               
chr18:50281654-50282017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
618-983
               

               
Cow position:
               
chr18:56391535-56391170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
619-961
               

               
Cow position:
               
chr18:56267479-56267137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
619-983
               

               
Cow position:
               
chr18:54992633-54992997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
238, 223
               

               
Conread position:
               
620-931
               

               
Cow position:
               
chr18:50245975-50246286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
620-981
               

               
Cow position:
               
chr18:41949366-41949005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
620-981
               

               
Cow position:
               
chr18:50049245-50048880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 331
               

               
Conread position:
               
620-983
               

               
Cow position:
               
chr18:55497640-55497277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
245, 240
               

               
Conread position:
               
620-983
               

               
Cow position:
               
chr18:56330205-56329842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 334
               

               
Conread position:
               
621-983
               

               
Cow position:
               
chr18:42985577-42985215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
243, 229
               

               
Conread position:
               
622-978
               

               
Cow position:
               
chr18:42960315-42959959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
154, 168
               

               
Conread position:
               
622-981
               

               
Cow position:
               
chr18:43120339-43119980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
154, 159
               

               
Conread position:
               
622-983
               

               
Cow position:
               
chr18:44154470-44154106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 236
               

               
Conread position:
               
623-983
               

               
Cow position:
               
chr18:42694063-42693703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
623-983
               

               
Cow position:
               
chr18:53509224-53509583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
623-983
               

               
Cow position:
               
chr18:53525678-53526037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
625-924
               

               
Cow position:
               
chr18:22634879-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
625-982
               

               
Cow position:
               
chr18:43048741-43048384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
625-983
               

               
Cow position:
               
chr18:50022587-50022226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
625-983
               

               
Cow position:
               
chr18:56316036-56316394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
626-948
               

               
Cow position:
               
chr18:51752346-51752025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
626-981
               

               
Cow position:
               
chr18:33093118-33092763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
632-961
               

               
Cow position:
               
chr18:55067116-55066787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
233, 221
               

               
Conread position:
               
632-982
               

               
Cow position:
               
chr18:42724594-42724244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
637-983
               

               
Cow position:
               
chr18:40306169-40306514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
220, 5
               

               
Conread position:
               
638-982
               

               
Cow position:
               
chr18:43167707-43168052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
640-963
               

               
Cow position:
               
chr18:50021723-50021400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
640-983
               

               
Cow position:
               
chr18:53587165-53586822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
217, 233
               

               
Conread position:
               
642-983
               

               
Cow position:
               
chr18:49033378-49033037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 222
               

               
Conread position:
               
643-983
               

               
Cow position:
               
chr18:49022233-49022573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
251, 236
               

               
Conread position:
               
647-981
               

               
Cow position:
               
chr18:41197500-41197834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
647-981
               

               
Cow position:
               
chr18:50098900-50099234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
650-981
               

               
Cow position:
               
chr18:53636116-53635785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
650-981
               

               
Cow position:
               
chr18:56128049-56128380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
293, 307
               

               
Conread position:
               
651-943
               

               
Cow position:
               
chr18:50271390-50271682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
212, 193
               

               
Conread position:
               
653-981
               

               
Cow position:
               
chr18:55497691-55497363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
205, 200
               

               
Conread position:
               
653-981
               

               
Cow position:
               
chr18:55523323-55523651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
656-932
               

               
Cow position:
               
chr18:53559692-53559968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
656-981
               

               
Cow position:
               
chr18:50083300-50083625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
661-969
               

               
Cow position:
               
chr18:56391963-56391655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
204, 192
               

               
Conread position:
               
662-983
               

               
Cow position:
               
chr18:50083222-50083543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
671-981
               

               
Cow position:
               
chr18:50059674-50059364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
693-981
               

               
Cow position:
               
chr18:50281645-50281933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
700-984
               

               
Cow position:
               
chr18:42790942-42791226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
256, 250
               

               
Conread position:
               
704-983
               

               
Cow position:
               
chr18:40074921-40075200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
710-983
               

               
Cow position:
               
chr18:43048740-43048467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
711-983
               

               
Cow position:
               
chr18:56267555-56267283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
713-959
               

               
Cow position:
               
chr18:44818629-44818875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
159, 136
               

               
Conread position:
               
713-983
               

               
Cow position:
               
chr18:53636137-53635867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
713-983
               

               
Cow position:
               
chr18:56128028-56128298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
716-983
               

               
Cow position:
               
chr18:55067116-55066849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 148
               

               
Conread position:
               
733-983
               

               
Cow position:
               
chr18:55497695-55497445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
746-959
               

               
Cow position:
               
chr18:55075112-55075326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
800-972
               

               
Cow position:
               
chr18:44817903-44818075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.